RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 ZNF844Q08AG5 666 aa13.66□□□□□ -0.22
LIG1-215ENST00000597901 BCL2A1Q16548 175 aa13.66□□□□□ -0.22
LIG1-215ENST00000597901 KRT71Q3SY84 523 aa13.66□□□□□ -0.22
LIG1-215ENST00000597901 FBXL19-AS1Q494R0 122 aa13.66□□□□□ -0.22
LIG1-215ENST00000597901 XKR7Q5GH72 579 aa13.66□□□□□ -0.22
LIG1-215ENST00000597901 ADGRE4PQ86SQ3 457 aa13.66□□□□□ -0.22
LIG1-215ENST00000597901 CDRT4Q8N9R6 151 aa13.66□□□□□ -0.22
LIG1-215ENST00000597901 RNASE6Q93091 150 aaKnown RBP13.66□□□□□ -0.22
LIG1-215ENST00000597901 GIMAP5Q96F15 307 aa13.66□□□□□ -0.22
LIG1-215ENST00000597901 C16orf58Q96GQ5 468 aa13.66□□□□□ -0.22
LIG1-215ENST00000597901 SH3GL2Q99962 352 aa13.66□□□□□ -0.22
LIG1-215ENST00000597901 G6PC3Q9BUM1 346 aa13.66□□□□□ -0.22
LIG1-215ENST00000597901 WDR91A4D1P6 747 aa13.65□□□□□ -0.22
LIG1-215ENST00000597901 CLCA1A8K7I4 914 aa13.65□□□□□ -0.22
LIG1-215ENST00000597901 RGS16O15492 202 aaPredicted RBP13.65□□□□□ -0.22
LIG1-215ENST00000597901 RCBTB2O95199 551 aa13.65□□□□□ -0.22
LIG1-215ENST00000597901 UTS2O95399 124 aa13.65□□□□□ -0.22
LIG1-215ENST00000597901 IL18BPO95998 194 aa13.65□□□□□ -0.22
LIG1-215ENST00000597901 LAMP1P11279 417 aa13.65□□□□□ -0.22
LIG1-215ENST00000597901 ZNF708P17019 499 aa13.65□□□□□ -0.22
LIG1-215ENST00000597901 DDX5P17844 614 aaKnown RBP13.65□□□□□ -0.22
LIG1-215ENST00000597901 HK1P19367 917 aa13.65□□□□□ -0.22
LIG1-215ENST00000597901 OPRM1P35372 400 aa13.65□□□□□ -0.22
LIG1-215ENST00000597901 SERPINB4P48594 390 aa13.65□□□□□ -0.22
LIG1-215ENST00000597901 ASCL1P50553 236 aa13.65□□□□□ -0.22
LIG1-215ENST00000597901 DGKQP52824 942 aa13.65□□□□□ -0.22
LIG1-215ENST00000597901 CLDN18P56856 261 aa13.65□□□□□ -0.22
LIG1-215ENST00000597901 C17orf67Q0P5P2 114 aa13.65□□□□□ -0.22
LIG1-215ENST00000597901 FOXF2Q12947 444 aa13.65□□□□□ -0.22
LIG1-215ENST00000597901 STX5Q13190 355 aa13.65□□□□□ -0.22
LIG1-215ENST00000597901 MLC1Q15049 377 aa13.65□□□□□ -0.22
LIG1-215ENST00000597901 VPS26BQ4G0F5 336 aa13.65□□□□□ -0.22
LIG1-215ENST00000597901 ATP6AP1LQ52LC2 224 aa13.65□□□□□ -0.22
LIG1-215ENST00000597901 IL23RQ5VWK5 629 aa13.65□□□□□ -0.22
LIG1-215ENST00000597901 PLXDC2Q6UX71 529 aa13.65□□□□□ -0.22
LIG1-215ENST00000597901 APOOLQ6UXV4 268 aa13.65□□□□□ -0.22
LIG1-215ENST00000597901 SLC16A11Q8NCK7 471 aa13.65□□□□□ -0.22
LIG1-215ENST00000597901 OR7A2PQ8NGA2 310 aa13.65□□□□□ -0.22
LIG1-215ENST00000597901 FAM110BQ8TC76 370 aa13.65□□□□□ -0.22
LIG1-215ENST00000597901 NUDT8Q8WV74 236 aa13.65□□□□□ -0.22
LIG1-215ENST00000597901 SLC9A6Q92581 669 aa13.65□□□□□ -0.22
LIG1-215ENST00000597901 WNT2BQ93097 391 aa13.65□□□□□ -0.22
LIG1-215ENST00000597901 LRRC46Q96FV0 321 aa13.65□□□□□ -0.22
LIG1-215ENST00000597901 RMND5BQ96G75 393 aaPredicted RBP13.65□□□□□ -0.22
LIG1-215ENST00000597901 TM9SF2Q99805 663 aa13.65□□□□□ -0.22
LIG1-215ENST00000597901 ZNF395Q9H8N7 513 aaPredicted RBP13.65□□□□□ -0.22
LIG1-215ENST00000597901 RAB21Q9UL25 225 aa13.65□□□□□ -0.22
LIG1-215ENST00000597901 CACNA1CQ13936 2221 aa13.65□□□□□ -0.22
LIG1-215ENST00000597901 PDZD2O15018 2839 aa13.64□□□□□ -0.23
LIG1-215ENST00000597901 A0A1W2PRB8 838 aa13.64□□□□□ -0.23
LIG1-215ENST00000597901 SCAMP2O15127 329 aaKnown RBP13.64□□□□□ -0.23
LIG1-215ENST00000597901 ITM2AO43736 263 aa13.64□□□□□ -0.23
LIG1-215ENST00000597901 LYPLA1O75608 230 aaPredicted RBP13.64□□□□□ -0.23
LIG1-215ENST00000597901 TMIGD3P0DMS9 266 aaPredicted RBP13.64□□□□□ -0.23
LIG1-215ENST00000597901 ACP2P11117 423 aa13.64□□□□□ -0.23
LIG1-215ENST00000597901 PEPDP12955 493 aa13.64□□□□□ -0.23
LIG1-215ENST00000597901 RPL3P39023 403 aaKnown RBP13.64□□□□□ -0.23
LIG1-215ENST00000597901 PEX19P40855 299 aa13.64□□□□□ -0.23
LIG1-215ENST00000597901 DIO3P55073 304 aa13.64□□□□□ -0.23
LIG1-215ENST00000597901 PRR5P85299 388 aa13.64□□□□□ -0.23
LIG1-215ENST00000597901 GRAMD1BQ3KR37 738 aa13.64□□□□□ -0.23
LIG1-215ENST00000597901 CPTPQ5TA50 214 aa13.64□□□□□ -0.23
LIG1-215ENST00000597901 MFSD12Q6NUT3 480 aa13.64□□□□□ -0.23
LIG1-215ENST00000597901 ZCCHC12Q6PEW1 402 aa13.64□□□□□ -0.23
LIG1-215ENST00000597901 CDH24Q86UP0 819 aa13.64□□□□□ -0.23
LIG1-215ENST00000597901 ZZZ3Q8IYH5 903 aa13.64□□□□□ -0.23
LIG1-215ENST00000597901 OR4C3Q8NH37 302 aa13.64□□□□□ -0.23
LIG1-215ENST00000597901 PPP1R14CQ8TAE6 165 aa13.64□□□□□ -0.23
LIG1-215ENST00000597901 OR5P2Q8WZ92 322 aa13.64□□□□□ -0.23
LIG1-215ENST00000597901 TUBGCP3Q96CW5 907 aa13.64□□□□□ -0.23
LIG1-215ENST00000597901 COQ8BQ96D53 544 aa13.64□□□□□ -0.23
LIG1-215ENST00000597901 YIPF4Q9BSR8 244 aa13.64□□□□□ -0.23
LIG1-215ENST00000597901 TBL1XR1Q9BZK7 514 aa13.64□□□□□ -0.23
LIG1-215ENST00000597901 PTGES2Q9H7Z7 377 aa13.64□□□□□ -0.23
LIG1-215ENST00000597901 JKAMPQ9P055 326 aa13.64□□□□□ -0.23
LIG1-215ENST00000597901 FOXD3Q9UJU5 478 aaPredicted RBP13.64□□□□□ -0.23
LIG1-215ENST00000597901 ZNF337Q9Y3M9 751 aa13.64□□□□□ -0.23
LIG1-215ENST00000597901 IGLV3-32A0A0A0MS00 114 aa13.63□□□□□ -0.23
LIG1-215ENST00000597901 BIRC5O15392 142 aa13.63□□□□□ -0.23
LIG1-215ENST00000597901 SKAP2O75563 359 aaPredicted RBP13.63□□□□□ -0.23
LIG1-215ENST00000597901 KCNK2O95069 426 aa13.63□□□□□ -0.23
LIG1-215ENST00000597901 ZWINTO95229 277 aa13.63□□□□□ -0.23
LIG1-215ENST00000597901 HSPA4LO95757 839 aa13.63□□□□□ -0.23
LIG1-215ENST00000597901 ANGPTL1O95841 491 aa13.63□□□□□ -0.23
LIG1-215ENST00000597901 ALOX5P09917 674 aa13.63□□□□□ -0.23
LIG1-215ENST00000597901 TBXA2RP21731 343 aa13.63□□□□□ -0.23
LIG1-215ENST00000597901 HPCAL1P37235 193 aa13.63□□□□□ -0.23
LIG1-215ENST00000597901 CLDN15P56746 228 aa13.63□□□□□ -0.23
LIG1-215ENST00000597901 MPP2Q14168 576 aa13.63□□□□□ -0.23
LIG1-215ENST00000597901 PTGR1Q14914 329 aa13.63□□□□□ -0.23
LIG1-215ENST00000597901 DUSP5Q16690 384 aa13.63□□□□□ -0.23
LIG1-215ENST00000597901 GLYR1Q49A26 553 aaPredicted RBP13.63□□□□□ -0.23
LIG1-215ENST00000597901 EXOSC6Q5RKV6 272 aaKnown RBP13.63□□□□□ -0.23
LIG1-215ENST00000597901 FIGNL1Q6PIW4 674 aa13.63□□□□□ -0.23
LIG1-215ENST00000597901 SZRD1Q7Z422 152 aa13.63□□□□□ -0.23
LIG1-215ENST00000597901 GALNT10Q86SR1 603 aa13.63□□□□□ -0.23
LIG1-215ENST00000597901 NATD1Q8N6N6 113 aa13.63□□□□□ -0.23
LIG1-215ENST00000597901 FNDC5Q8NAU1 212 aa13.63□□□□□ -0.23
LIG1-215ENST00000597901 OR5M1Q8NGP8 315 aa13.63□□□□□ -0.23
LIG1-215ENST00000597901 ZBTB9Q96C00 473 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms