RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 BCAS4Q8TDM0 211 aa9.68□□□□□ -0.86
LIG1-210ENST00000596332 ADAMTS15Q8TE58 950 aa9.68□□□□□ -0.86
LIG1-210ENST00000596332 XAGE5Q8WWM1 108 aa9.68□□□□□ -0.86
LIG1-210ENST00000596332 LRRC58Q96CX6 371 aa9.68□□□□□ -0.86
LIG1-210ENST00000596332 RCN3Q96D15 328 aa9.68□□□□□ -0.86
LIG1-210ENST00000596332 SNRNP40Q96DI7 357 aaKnown RBP9.68□□□□□ -0.86
LIG1-210ENST00000596332 ZNF350Q9GZX5 532 aa9.68□□□□□ -0.86
LIG1-210ENST00000596332 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.68□□□□□ -0.86
LIG1-210ENST00000596332 SLC38A1Q9H2H9 487 aa9.68□□□□□ -0.86
LIG1-210ENST00000596332 KAT8Q9H7Z6 458 aaKnown RBP9.68□□□□□ -0.86
LIG1-210ENST00000596332 Q9N2J8 555 aa9.68□□□□□ -0.86
LIG1-210ENST00000596332 TUBA8Q9NY65 449 aaPredicted RBP9.68□□□□□ -0.86
LIG1-210ENST00000596332 USP22Q9UPT9 525 aa9.68□□□□□ -0.86
LIG1-210ENST00000596332 CHST2Q9Y4C5 530 aa9.68□□□□□ -0.86
LIG1-210ENST00000596332 EML6Q6ZMW3 1958 aa9.68□□□□□ -0.86
LIG1-210ENST00000596332 DSPPQ9NZW4 1301 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 NPIPA5A0A0B4J1W7 369 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 NPIPA7E9PJI5 369 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 MRASO14807 208 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 ANGPT2O15123 496 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 OIP5O43482 229 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 BCAS1O75363 584 aaPredicted RBP9.67□□□□□ -0.86
LIG1-210ENST00000596332 UTS2O95399 124 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 NPPAP01160 153 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 NGFRP08138 427 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 NPIPA8P0DM63 369 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 TBXA2RP21731 343 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 MST1P26927 711 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 MAGEA8P43361 318 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 NRG3P56975 720 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 PSPHP78330 225 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 CHRNEQ04844 493 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 STX5Q13190 355 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 NFYCQ13952 458 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 KRT72Q14CN4 511 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 HYAL4Q2M3T9 481 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 TRMT5Q32P41 509 aaKnown RBP9.67□□□□□ -0.86
LIG1-210ENST00000596332 KLHL26Q53HC5 615 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 GKAP1Q5VSY0 366 aaPredicted RBP9.67□□□□□ -0.86
LIG1-210ENST00000596332 PRAMEF20Q5VT98 475 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 BHLHB9Q6PI77 547 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 FRRS1Q6ZNA5 592 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 SZRD1Q7Z422 152 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 NET1Q7Z628 596 aaPredicted RBP9.67□□□□□ -0.86
LIG1-210ENST00000596332 SLC15A3Q8IY34 581 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 TRIML2Q8N7C3 387 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 COX18Q8N8Q8 333 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 CCDC197Q8NCU1 140 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 FAM13CQ8NE31 585 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 OR2M7Q8NG81 312 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 DNAJB8Q8NHS0 232 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 SLC38A5Q8WUX1 472 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 TM9SF4Q92544 642 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 MAL2Q969L2 176 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 ROPN1LQ96C74 230 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 ZNF583Q96ND8 569 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 LRRC37BQ96QE4 947 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 GALNT9Q9HCQ5 603 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 MRGBPQ9NV56 204 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 CMTM6Q9NX76 183 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 CNIH4Q9P003 139 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 ABI3Q9P2A4 366 aa9.67□□□□□ -0.86
LIG1-210ENST00000596332 FAF1Q9UNN5 650 aaPredicted RBP9.67□□□□□ -0.86
LIG1-210ENST00000596332 FAM208BQ5VWN6 2430 aa9.66□□□□□ -0.86
LIG1-210ENST00000596332 DUXAA6NLW8 204 aa9.66□□□□□ -0.86
LIG1-210ENST00000596332 BBIP1A8MTZ0 92 aa9.66□□□□□ -0.86
LIG1-210ENST00000596332 TMEM229AB2RXF0 380 aa9.66□□□□□ -0.86
LIG1-210ENST00000596332 UGT2B17O75795 530 aa9.66□□□□□ -0.86
LIG1-210ENST00000596332 WISP1O95388 367 aa9.66□□□□□ -0.86
LIG1-210ENST00000596332 H6PDO95479 791 aa9.66□□□□□ -0.86
LIG1-210ENST00000596332 KRT75O95678 551 aa9.66□□□□□ -0.86
LIG1-210ENST00000596332 OXSR1O95747 527 aaPredicted RBP9.66□□□□□ -0.86
LIG1-210ENST00000596332 EPPINO95925 133 aa9.66□□□□□ -0.86
LIG1-210ENST00000596332 CD46P15529 392 aa9.66□□□□□ -0.86
LIG1-210ENST00000596332 CHI3L1P36222 383 aaPredicted RBP9.66□□□□□ -0.86
LIG1-210ENST00000596332 CPOXP36551 454 aa9.66□□□□□ -0.86
LIG1-210ENST00000596332 RFC3P40938 356 aa9.66□□□□□ -0.86
LIG1-210ENST00000596332 CASRP41180 1078 aa9.66□□□□□ -0.86
LIG1-210ENST00000596332 MEOX1P50221 254 aa9.66□□□□□ -0.86
LIG1-210ENST00000596332 TDGF1P3P51864 188 aa9.66□□□□□ -0.86
LIG1-210ENST00000596332 CRYBA2P53672 197 aa9.66□□□□□ -0.86
LIG1-210ENST00000596332 MLLT10P55197 1068 aa9.66□□□□□ -0.86
LIG1-210ENST00000596332 MTPNP58546 118 aa9.66□□□□□ -0.86
LIG1-210ENST00000596332 SNTA1Q13424 505 aa9.66□□□□□ -0.86
LIG1-210ENST00000596332 ZNHIT3Q15649 155 aaPredicted RBP9.66□□□□□ -0.86
LIG1-210ENST00000596332 CD226Q15762 336 aa9.66□□□□□ -0.86
LIG1-210ENST00000596332 ZNF141Q15928 474 aa9.66□□□□□ -0.86
LIG1-210ENST00000596332 DECR1Q16698 335 aa9.66□□□□□ -0.86
LIG1-210ENST00000596332 C6orf89Q6UWU4 347 aa9.66□□□□□ -0.86
LIG1-210ENST00000596332 HACD2Q6Y1H2 254 aa9.66□□□□□ -0.86
LIG1-210ENST00000596332 MARCH3Q86UD3 253 aa9.66□□□□□ -0.86
LIG1-210ENST00000596332 CISD2Q8N5K1 135 aaKnown RBP9.66□□□□□ -0.86
LIG1-210ENST00000596332 TEX19Q8NA77 164 aa9.66□□□□□ -0.86
LIG1-210ENST00000596332 JADE3Q92613 823 aa9.66□□□□□ -0.86
LIG1-210ENST00000596332 TMEM125Q96AQ2 219 aa9.66□□□□□ -0.86
LIG1-210ENST00000596332 TRNT1Q96Q11 434 aaKnown RBP9.66□□□□□ -0.86
LIG1-210ENST00000596332 UBQLN3Q9H347 655 aa9.66□□□□□ -0.86
LIG1-210ENST00000596332 TIMMDC1Q9NPL8 285 aa9.66□□□□□ -0.86
LIG1-210ENST00000596332 SACM1LQ9NTJ5 587 aa9.66□□□□□ -0.86
LIG1-210ENST00000596332 ASF1BQ9NVP2 202 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms