RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 FAM173AQ9BQD7 235 aa17.71■□□□□ 0.43
PNKP-207ENST00000596014 SLC25A37Q9NYZ2 338 aa17.71■□□□□ 0.43
PNKP-207ENST00000596014 SHANK1Q9Y566 2161 aa17.71■□□□□ 0.43
PNKP-207ENST00000596014 OR12D1P0DN82 309 aa17.71■□□□□ 0.42
PNKP-207ENST00000596014 TBCELQ5QJ74 424 aa17.71■□□□□ 0.42
PNKP-207ENST00000596014 CCNJQ5T5M9 372 aa17.71■□□□□ 0.42
PNKP-207ENST00000596014 TMEM81Q6P7N7 255 aa17.71■□□□□ 0.42
PNKP-207ENST00000596014 GALNT10Q86SR1 603 aa17.71■□□□□ 0.42
PNKP-207ENST00000596014 MSRB3Q8IXL7 192 aa17.71■□□□□ 0.42
PNKP-207ENST00000596014 DPP10Q8N608 796 aa17.71■□□□□ 0.42
PNKP-207ENST00000596014 RAB8BQ92930 207 aa17.71■□□□□ 0.42
PNKP-207ENST00000596014 AURKBQ96GD4 344 aaPredicted RBP17.71■□□□□ 0.42
PNKP-207ENST00000596014 ANGPTL4Q9BY76 406 aa17.71■□□□□ 0.42
PNKP-207ENST00000596014 METTL7AQ9H8H3 244 aa17.71■□□□□ 0.42
PNKP-207ENST00000596014 ASF1BQ9NVP2 202 aa17.71■□□□□ 0.42
PNKP-207ENST00000596014 FBXO34Q9NWN3 711 aa17.71■□□□□ 0.42
PNKP-207ENST00000596014 LOC100653049A0A140TA62 436 aa17.7■□□□□ 0.42
PNKP-207ENST00000596014 CLIC1O00299 241 aa17.7■□□□□ 0.42
PNKP-207ENST00000596014 GYG2O15488 501 aa17.7■□□□□ 0.42
PNKP-207ENST00000596014 ASNA1O43681 348 aa17.7■□□□□ 0.42
PNKP-207ENST00000596014 HS6ST1O60243 411 aa17.7■□□□□ 0.42
PNKP-207ENST00000596014 KRT34O76011 436 aa17.7■□□□□ 0.42
PNKP-207ENST00000596014 MVDP53602 400 aa17.7■□□□□ 0.42
PNKP-207ENST00000596014 MAPRE2Q15555 327 aa17.7■□□□□ 0.42
PNKP-207ENST00000596014 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.7■□□□□ 0.42
PNKP-207ENST00000596014 COX20Q5RI15 118 aa17.7■□□□□ 0.42
PNKP-207ENST00000596014 FAM180AQ6UWF9 173 aa17.7■□□□□ 0.42
PNKP-207ENST00000596014 DLEU7Q6UYE1 221 aa17.7■□□□□ 0.42
PNKP-207ENST00000596014 ZFP62Q8NB50 900 aaPredicted RBP17.7■□□□□ 0.42
PNKP-207ENST00000596014 POGLUT1Q8NBL1 392 aa17.7■□□□□ 0.42
PNKP-207ENST00000596014 DNAJB8Q8NHS0 232 aa17.7■□□□□ 0.42
PNKP-207ENST00000596014 XAGE5Q8WWM1 108 aa17.7■□□□□ 0.42
PNKP-207ENST00000596014 NTNG2Q96CW9 530 aa17.7■□□□□ 0.42
PNKP-207ENST00000596014 BARD1Q99728 777 aaKnown RBP17.7■□□□□ 0.42
PNKP-207ENST00000596014 DOHHQ9BU89 302 aa17.7■□□□□ 0.42
PNKP-207ENST00000596014 G6PC3Q9BUM1 346 aa17.7■□□□□ 0.42
PNKP-207ENST00000596014 CADM1Q9BY67 442 aaKnown RBP17.7■□□□□ 0.42
PNKP-207ENST00000596014 FLRT3Q9NZU0 649 aa17.7■□□□□ 0.42
PNKP-207ENST00000596014 VAPAQ9P0L0 249 aa17.7■□□□□ 0.42
PNKP-207ENST00000596014 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.7■□□□□ 0.42
PNKP-207ENST00000596014 FBP2O00757 339 aa17.69■□□□□ 0.42
PNKP-207ENST00000596014 ICOSLGO75144 302 aa17.69■□□□□ 0.42
PNKP-207ENST00000596014 AGR2O95994 175 aa17.69■□□□□ 0.42
PNKP-207ENST00000596014 CRYABP02511 175 aaKnown RBP17.69■□□□□ 0.42
PNKP-207ENST00000596014 RFC3P40938 356 aa17.69■□□□□ 0.42
PNKP-207ENST00000596014 PTGDSP41222 190 aa17.69■□□□□ 0.42
PNKP-207ENST00000596014 KHKP50053 298 aa17.69■□□□□ 0.42
PNKP-207ENST00000596014 TLE1Q04724 770 aa17.69■□□□□ 0.42
PNKP-207ENST00000596014 FOXO1Q12778 655 aa17.69■□□□□ 0.42
PNKP-207ENST00000596014 SNTA1Q13424 505 aa17.69■□□□□ 0.42
PNKP-207ENST00000596014 DCST2Q5T1A1 773 aa17.69■□□□□ 0.42
PNKP-207ENST00000596014 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.69■□□□□ 0.42
PNKP-207ENST00000596014 ZAR1Q86SH2 424 aa17.69■□□□□ 0.42
PNKP-207ENST00000596014 SNX32Q86XE0 403 aa17.69■□□□□ 0.42
PNKP-207ENST00000596014 FAR1Q8WVX9 515 aa17.69■□□□□ 0.42
PNKP-207ENST00000596014 AGPAT4Q9NRZ5 378 aa17.69■□□□□ 0.42
PNKP-207ENST00000596014 EXD2Q9NVH0 621 aa17.69■□□□□ 0.42
PNKP-207ENST00000596014 TUBA8Q9NY65 449 aaPredicted RBP17.69■□□□□ 0.42
PNKP-207ENST00000596014 KLRF1Q9NZS2 232 aa17.69■□□□□ 0.42
PNKP-207ENST00000596014 TRBV5-3A0A0A0MS03 114 aa17.68■□□□□ 0.42
PNKP-207ENST00000596014 PRAMEF25A6NGN4 478 aa17.68■□□□□ 0.42
PNKP-207ENST00000596014 HMGN4O00479 90 aa17.68■□□□□ 0.42
PNKP-207ENST00000596014 SLC28A2O43868 658 aa17.68■□□□□ 0.42
PNKP-207ENST00000596014 SNX4O95219 450 aa17.68■□□□□ 0.42
PNKP-207ENST00000596014 UTS2O95399 124 aa17.68■□□□□ 0.42
PNKP-207ENST00000596014 MAGEA8P43361 318 aa17.68■□□□□ 0.42
PNKP-207ENST00000596014 TXNL4AP83876 142 aaKnown RBP17.68■□□□□ 0.42
PNKP-207ENST00000596014 ARHGAP11BQ3KRB8 267 aa17.68■□□□□ 0.42
PNKP-207ENST00000596014 RNFT1Q5M7Z0 435 aa17.68■□□□□ 0.42
PNKP-207ENST00000596014 HEPHL1Q6MZM0 1159 aa17.68■□□□□ 0.42
PNKP-207ENST00000596014 SLC30A6Q6NXT4 461 aa17.68■□□□□ 0.42
PNKP-207ENST00000596014 CHDHQ8NE62 594 aaPredicted RBP17.68■□□□□ 0.42
PNKP-207ENST00000596014 RNF138Q8WVD3 245 aa17.68■□□□□ 0.42
PNKP-207ENST00000596014 SDF2Q99470 211 aa17.68■□□□□ 0.42
PNKP-207ENST00000596014 TAS2R1Q9NYW7 299 aa17.68■□□□□ 0.42
PNKP-207ENST00000596014 FADS1O60427 444 aa17.67■□□□□ 0.42
PNKP-207ENST00000596014 TRIM3O75382 744 aaPredicted RBP17.67■□□□□ 0.42
PNKP-207ENST00000596014 EVI2BP34910 448 aa17.67■□□□□ 0.42
PNKP-207ENST00000596014 ANXA11P50995 505 aaKnown RBP17.67■□□□□ 0.42
PNKP-207ENST00000596014 CYLC2Q14093 348 aaPredicted RBP17.67■□□□□ 0.42
PNKP-207ENST00000596014 COQ5Q5HYK3 327 aa17.67■□□□□ 0.42
PNKP-207ENST00000596014 ATAD3BQ5T9A4 648 aa17.67■□□□□ 0.42
PNKP-207ENST00000596014 ZNF324BQ6AW86 544 aaPredicted RBP17.67■□□□□ 0.42
PNKP-207ENST00000596014 C16orf62Q7Z3J2 963 aa17.67■□□□□ 0.42
PNKP-207ENST00000596014 DHDDSQ86SQ9 333 aa17.67■□□□□ 0.42
PNKP-207ENST00000596014 OR52N2Q8NGI0 321 aa17.67■□□□□ 0.42
PNKP-207ENST00000596014 OR4C3Q8NH37 302 aa17.67■□□□□ 0.42
PNKP-207ENST00000596014 RP9Q8TA86 221 aaKnown RBP17.67■□□□□ 0.42
PNKP-207ENST00000596014 MCUR1Q96AQ8 359 aa17.67■□□□□ 0.42
PNKP-207ENST00000596014 OSBPL11Q9BXB4 747 aa17.67■□□□□ 0.42
PNKP-207ENST00000596014 GALNT9Q9HCQ5 603 aa17.67■□□□□ 0.42
PNKP-207ENST00000596014 FREM3P0C091 2139 aa17.67■□□□□ 0.42
PNKP-207ENST00000596014 PRAMEF27A3QJZ7 478 aa17.67■□□□□ 0.42
PNKP-207ENST00000596014 C2orf72A6NCS6 295 aa17.67■□□□□ 0.42
PNKP-207ENST00000596014 BBIP1A8MTZ0 92 aa17.67■□□□□ 0.42
PNKP-207ENST00000596014 B2RBV5 119 aa17.67■□□□□ 0.42
PNKP-207ENST00000596014 GSC2O15499 205 aa17.67■□□□□ 0.42
PNKP-207ENST00000596014 GLSO94925 669 aaPredicted RBP17.67■□□□□ 0.42
PNKP-207ENST00000596014 AK1P00568 194 aa17.67■□□□□ 0.42
PNKP-207ENST00000596014 ZNF24P17028 368 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms