RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 FUT5Q11128 374 aa12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 SNCBQ16143 134 aa12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 CYP27C1Q4G0S4 372 aa12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 CCNJQ5T5M9 372 aa12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 FAM69BQ5VUD6 431 aa12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 FIGNL1Q6PIW4 674 aa12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 HSDL2Q6YN16 418 aa12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 OLIG3Q7RTU3 272 aa12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 ARMC8Q8IUR7 673 aa12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 IL22RA1Q8N6P7 574 aa12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 SPPL2AQ8TCT8 520 aa12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 RASSF5Q8WWW0 418 aa12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 TAMM41Q96BW9 452 aa12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 RMND5BQ96G75 393 aaPredicted RBP12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 LCORQ96JN0 433 aaPredicted RBP12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 GAL3ST4Q96RP7 486 aa12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 WDR77Q9BQA1 342 aaPredicted RBP12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 CHID1Q9BWS9 393 aa12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 ZNF700Q9H0M5 742 aa12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 MAGIXQ9H6Y5 334 aa12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 POLE3Q9NRF9 147 aa12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 ARMC1Q9NVT9 282 aa12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 STX18Q9P2W9 335 aaKnown RBP12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 SEC14L3Q9UDX4 400 aa12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 KCND3Q9UK17 655 aa12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 MRTO4Q9UKD2 239 aaKnown RBP12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 CBLCQ9ULV8 474 aa12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 ZNF232Q9UNY5 417 aa12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 GPR55Q9Y2T6 319 aaPredicted RBP12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 WDR45Q9Y484 360 aa12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 GPC6Q9Y625 555 aaPredicted RBP12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 CREBBPQ92793 2442 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 BSNQ9UPA5 3926 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 LOC101059948A0A1B0GTJ6 334 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 CDRT15L2A8MXV6 281 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 H3BNX3 289 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 FCMRO60667 390 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 ZFAND5O76080 213 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 KCNK2O95069 426 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 MFN2O95140 757 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 OPN1SWP03999 348 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 CT45A8P0DMV1 189 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 CT45A9P0DMV2 189 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 STAT5AP42229 794 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 RFX3P48380 749 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 NR0B1P51843 470 aaKnown RBP12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 RPS18P62269 152 aaKnown RBP12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 GPR68Q15743 365 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 EXT1Q16394 746 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 C4orf17Q53FE4 359 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 CT45A2Q5DJT8 189 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 IRAK1BP1Q5VVH5 260 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 IGF2-ASQ6U949 168 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 NDUFAF7Q7L592 441 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 PEX5LQ8IYB4 626 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 SMYD1Q8NB12 490 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 PAPD5Q8NDF8 572 aaKnown RBP12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 OR5L2Q8NGL0 311 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 OR10Q1Q8NGQ4 319 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 FAM110BQ8TC76 370 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 KCNE4Q8WWG9 221 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 PMM1Q92871 262 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 NKD1Q969G9 470 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 ADIPOR1Q96A54 375 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 KIAA1143Q96AT1 154 aaPredicted RBP12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 HSH2DQ96JZ2 352 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 G6PC3Q9BUM1 346 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 SLC38A1Q9H2H9 487 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 RUBCNLQ9H714 662 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 THSD1Q9NS62 852 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 NKX1-2Q9UD57 310 aaPredicted RBP12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 BAG5Q9UL15 447 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 MKLN1Q9UL63 735 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 PPIEQ9UNP9 301 aaKnown RBP12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 DTX4Q9Y2E6 619 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 IFT52Q9Y366 437 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 HS3ST3B1Q9Y662 390 aa12.08□□□□□ -0.48
SHKBP1-209ENST00000595803 IGHV1-45A0A0A0MS14 117 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 NSG1A0A0A6YYJ2 146 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 TRBV11-1A0A0K0K1C0 115 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 FRG2CA6NGY1 282 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 KLK10O43240 276 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 TPST1O60507 370 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 TIPRLO75663 272 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 GUSBP08236 651 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 FCGR1AP12314 374 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 FASP25445 335 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 KRT20P35900 424 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 PIGAP37287 484 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 PSMD4P55036 377 aaKnown RBP12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 RNF4P78317 190 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 PCOLCEQ15113 449 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 EBPQ15125 230 aaKnown RBP12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 NNATQ16517 81 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 DECR1Q16698 335 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 BTBD16Q32M84 506 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 IFI44LQ53G44 452 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 ZNF311Q5JNZ3 666 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 TYW3Q6IPR3 259 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms