RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 IMPDH1P20839 514 aa12.32□□□□□ -0.44
SHKBP1-208ENST00000595726 GPX3P22352 226 aa12.32□□□□□ -0.44
SHKBP1-208ENST00000595726 SRD5A2P31213 254 aa12.32□□□□□ -0.44
SHKBP1-208ENST00000595726 BUD31P41223 144 aaPredicted RBP12.32□□□□□ -0.44
SHKBP1-208ENST00000595726 PRKAA2P54646 552 aa12.32□□□□□ -0.44
SHKBP1-208ENST00000595726 CASP9P55211 416 aa12.32□□□□□ -0.44
SHKBP1-208ENST00000595726 BCL2A1Q16548 175 aa12.32□□□□□ -0.44
SHKBP1-208ENST00000595726 ADAM5Q6NVV9 412 aa12.32□□□□□ -0.44
SHKBP1-208ENST00000595726 CYP20A1Q6UW02 462 aa12.32□□□□□ -0.44
SHKBP1-208ENST00000595726 ATG4DQ86TL0 474 aaPredicted RBP12.32□□□□□ -0.44
SHKBP1-208ENST00000595726 SLC22A9Q8IVM8 553 aa12.32□□□□□ -0.44
SHKBP1-208ENST00000595726 FBXW5Q969U6 566 aa12.32□□□□□ -0.44
SHKBP1-208ENST00000595726 L3HYPDHQ96EM0 354 aa12.32□□□□□ -0.44
SHKBP1-208ENST00000595726 ZNF382Q96SR6 550 aa12.32□□□□□ -0.44
SHKBP1-208ENST00000595726 MRPL1Q9BYD6 325 aaKnown RBP12.32□□□□□ -0.44
SHKBP1-208ENST00000595726 ACTR6Q9GZN1 396 aa12.32□□□□□ -0.44
SHKBP1-208ENST00000595726 TMEM160Q9NX00 188 aa12.32□□□□□ -0.44
SHKBP1-208ENST00000595726 LPAR3Q9UBY5 353 aa12.32□□□□□ -0.44
SHKBP1-208ENST00000595726 CLEC4AQ9UMR7 237 aa12.32□□□□□ -0.44
SHKBP1-208ENST00000595726 SNX6Q9UNH7 406 aa12.32□□□□□ -0.44
SHKBP1-208ENST00000595726 EXPH5Q8NEV8 1989 aa12.32□□□□□ -0.44
SHKBP1-208ENST00000595726 G3V2L1 256 aa12.31□□□□□ -0.44
SHKBP1-208ENST00000595726 ABCB7O75027 752 aa12.31□□□□□ -0.44
SHKBP1-208ENST00000595726 AQP8O94778 261 aa12.31□□□□□ -0.44
SHKBP1-208ENST00000595726 SLU7O95391 586 aaKnown RBP12.31□□□□□ -0.44
SHKBP1-208ENST00000595726 PDYNP01213 254 aa12.31□□□□□ -0.44
SHKBP1-208ENST00000595726 CD8AP01732 235 aa12.31□□□□□ -0.44
SHKBP1-208ENST00000595726 PROCP04070 461 aa12.31□□□□□ -0.44
SHKBP1-208ENST00000595726 NR2F6P10588 404 aa12.31□□□□□ -0.44
SHKBP1-208ENST00000595726 PPP3CBP16298 524 aa12.31□□□□□ -0.44
SHKBP1-208ENST00000595726 NAGAP17050 411 aa12.31□□□□□ -0.44
SHKBP1-208ENST00000595726 S1PR1P21453 382 aa12.31□□□□□ -0.44
SHKBP1-208ENST00000595726 GALNSP34059 522 aa12.31□□□□□ -0.44
SHKBP1-208ENST00000595726 HMGCS1Q01581 520 aa12.31□□□□□ -0.44
SHKBP1-208ENST00000595726 ZNF844Q08AG5 666 aa12.31□□□□□ -0.44
SHKBP1-208ENST00000595726 SNTA1Q13424 505 aa12.31□□□□□ -0.44
SHKBP1-208ENST00000595726 PON3Q15166 354 aa12.31□□□□□ -0.44
SHKBP1-208ENST00000595726 GUSBP1Q15486 140 aa12.31□□□□□ -0.44
SHKBP1-208ENST00000595726 CTU2Q2VPK5 515 aaKnown RBP12.31□□□□□ -0.44
SHKBP1-208ENST00000595726 PGGHGQ32M88 737 aa12.31□□□□□ -0.44
SHKBP1-208ENST00000595726 SGO1Q5FBB7 561 aa12.31□□□□□ -0.44
SHKBP1-208ENST00000595726 TCHHL1Q5QJ38 904 aaPredicted RBP12.31□□□□□ -0.44
SHKBP1-208ENST00000595726 TMEM81Q6P7N7 255 aa12.31□□□□□ -0.44
SHKBP1-208ENST00000595726 FAM214BQ7L5A3 538 aa12.31□□□□□ -0.44
SHKBP1-208ENST00000595726 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.31□□□□□ -0.44
SHKBP1-208ENST00000595726 GALNT12Q8IXK2 581 aa12.31□□□□□ -0.44
SHKBP1-208ENST00000595726 CDYL2Q8N8U2 506 aa12.31□□□□□ -0.44
SHKBP1-208ENST00000595726 OR5M1Q8NGP8 315 aa12.31□□□□□ -0.44
SHKBP1-208ENST00000595726 OR2W6PQ8NHA6 318 aa12.31□□□□□ -0.44
SHKBP1-208ENST00000595726 SELENOMQ8WWX9 145 aa12.31□□□□□ -0.44
SHKBP1-208ENST00000595726 HBEGFQ99075 208 aa12.31□□□□□ -0.44
SHKBP1-208ENST00000595726 GSTO2Q9H4Y5 243 aa12.31□□□□□ -0.44
SHKBP1-208ENST00000595726 BRF2Q9HAW0 419 aa12.31□□□□□ -0.44
SHKBP1-208ENST00000595726 DKKL1Q9UK85 242 aa12.31□□□□□ -0.44
SHKBP1-208ENST00000595726 RNF115Q9Y4L5 304 aa12.31□□□□□ -0.44
SHKBP1-208ENST00000595726 A0A1W2PP18 115 aa12.3□□□□□ -0.44
SHKBP1-208ENST00000595726 UBFD1O14562 309 aaKnown RBP12.3□□□□□ -0.44
SHKBP1-208ENST00000595726 SEC14L5O43304 696 aa12.3□□□□□ -0.44
SHKBP1-208ENST00000595726 PLIN3O60664 434 aa12.3□□□□□ -0.44
SHKBP1-208ENST00000595726 TNFRSF21O75509 655 aa12.3□□□□□ -0.44
SHKBP1-208ENST00000595726 NUDT17P0C025 328 aa12.3□□□□□ -0.44
SHKBP1-208ENST00000595726 ZNF16P17020 682 aaPredicted RBP12.3□□□□□ -0.44
SHKBP1-208ENST00000595726 CFPP27918 469 aa12.3□□□□□ -0.44
SHKBP1-208ENST00000595726 CLDN20P56880 219 aa12.3□□□□□ -0.44
SHKBP1-208ENST00000595726 VLDLRP98155 873 aa12.3□□□□□ -0.44
SHKBP1-208ENST00000595726 PLCXD2Q0VAA5 305 aa12.3□□□□□ -0.44
SHKBP1-208ENST00000595726 GALNT1Q10472 559 aaPredicted RBP12.3□□□□□ -0.44
SHKBP1-208ENST00000595726 LCP2Q13094 533 aa12.3□□□□□ -0.44
SHKBP1-208ENST00000595726 EXOSC7Q15024 291 aaKnown RBP12.3□□□□□ -0.44
SHKBP1-208ENST00000595726 CCDC153Q494R4 210 aa12.3□□□□□ -0.44
SHKBP1-208ENST00000595726 WDR93Q6P2C0 686 aa12.3□□□□□ -0.44
SHKBP1-208ENST00000595726 FAM111BQ6SJ93 734 aa12.3□□□□□ -0.44
SHKBP1-208ENST00000595726 ZYG11AQ6WRX3 759 aa12.3□□□□□ -0.44
SHKBP1-208ENST00000595726 GPRIN3Q6ZVF9 776 aa12.3□□□□□ -0.44
SHKBP1-208ENST00000595726 COMMD6Q7Z4G1 85 aa12.3□□□□□ -0.44
SHKBP1-208ENST00000595726 METTL4Q8N3J2 472 aa12.3□□□□□ -0.44
SHKBP1-208ENST00000595726 OR10H5Q8NGA6 315 aa12.3□□□□□ -0.44
SHKBP1-208ENST00000595726 AENQ8WTP8 325 aaKnown RBP12.3□□□□□ -0.44
SHKBP1-208ENST00000595726 HTRA1Q92743 480 aa12.3□□□□□ -0.44
SHKBP1-208ENST00000595726 CCDC126Q96EE4 140 aa12.3□□□□□ -0.44
SHKBP1-208ENST00000595726 C1orf159Q96HA4 380 aa12.3□□□□□ -0.44
SHKBP1-208ENST00000595726 ITPAQ9BY32 194 aa12.3□□□□□ -0.44
SHKBP1-208ENST00000595726 ESRP2Q9H6T0 727 aaKnown RBP12.3□□□□□ -0.44
SHKBP1-208ENST00000595726 PLSCR4Q9NRQ2 329 aa12.3□□□□□ -0.44
SHKBP1-208ENST00000595726 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.3□□□□□ -0.44
SHKBP1-208ENST00000595726 ADAM29Q9UKF5 820 aa12.3□□□□□ -0.44
SHKBP1-208ENST00000595726 SLC12A4Q9UP95 1085 aa12.3□□□□□ -0.44
SHKBP1-208ENST00000595726 STK38LQ9Y2H1 464 aa12.3□□□□□ -0.44
SHKBP1-208ENST00000595726 ZNF337Q9Y3M9 751 aa12.3□□□□□ -0.44
SHKBP1-208ENST00000595726 V9GYY5 206 aaPredicted RBP12.3□□□□□ -0.44
SHKBP1-208ENST00000595726 FREM1Q5H8C1 2179 aa12.29□□□□□ -0.44
SHKBP1-208ENST00000595726 YLPM1P49750 1951 aaKnown RBP12.29□□□□□ -0.44
SHKBP1-208ENST00000595726 SLC35F4A4IF30 521 aa12.29□□□□□ -0.44
SHKBP1-208ENST00000595726 MANBAO00462 879 aa12.29□□□□□ -0.44
SHKBP1-208ENST00000595726 COPEO14579 308 aa12.29□□□□□ -0.44
SHKBP1-208ENST00000595726 LMX1BO60663 402 aa12.29□□□□□ -0.44
SHKBP1-208ENST00000595726 KLK1P06870 262 aa12.29□□□□□ -0.44
SHKBP1-208ENST00000595726 IGHV4-31P0DP07 118 aa12.29□□□□□ -0.44
SHKBP1-208ENST00000595726 MYL2P10916 166 aa12.29□□□□□ -0.44
SHKBP1-208ENST00000595726 PEPDP12955 493 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms