RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 SLC22A8Q8TCC7 542 aa18.11■□□□□ 0.49
LSM4-203ENST00000593829 TP53INP1Q96A56 240 aa18.11■□□□□ 0.49
LSM4-203ENST00000593829 CENPNQ96H22 339 aaPredicted RBP18.11■□□□□ 0.49
LSM4-203ENST00000593829 TUBA1CQ9BQE3 449 aa18.11■□□□□ 0.49
LSM4-203ENST00000593829 PALMDQ9NP74 551 aa18.11■□□□□ 0.49
LSM4-203ENST00000593829 ACSS1Q9NUB1 689 aaPredicted RBP18.11■□□□□ 0.49
LSM4-203ENST00000593829 ATAD3AQ9NVI7 634 aa18.11■□□□□ 0.49
LSM4-203ENST00000593829 PRODH2Q9UF12 536 aa18.11■□□□□ 0.49
LSM4-203ENST00000593829 A8MVJ9 347 aa18.1■□□□□ 0.49
LSM4-203ENST00000593829 RASAL1O95294 804 aa18.1■□□□□ 0.49
LSM4-203ENST00000593829 FASP25445 335 aa18.1■□□□□ 0.49
LSM4-203ENST00000593829 SOX3P41225 446 aa18.1■□□□□ 0.49
LSM4-203ENST00000593829 FRKP42685 505 aaPredicted RBP18.1■□□□□ 0.49
LSM4-203ENST00000593829 MANFP55145 182 aaKnown RBP18.1■□□□□ 0.49
LSM4-203ENST00000593829 DUSP8Q13202 625 aa18.1■□□□□ 0.49
LSM4-203ENST00000593829 TBCELQ5QJ74 424 aa18.1■□□□□ 0.49
LSM4-203ENST00000593829 RPUSD3Q6P087 351 aaKnown RBP18.1■□□□□ 0.49
LSM4-203ENST00000593829 OPN5Q6U736 354 aa18.1■□□□□ 0.49
LSM4-203ENST00000593829 EPHX4Q8IUS5 362 aa18.1■□□□□ 0.49
LSM4-203ENST00000593829 CYP4Z2PQ8N1L4 340 aa18.1■□□□□ 0.49
LSM4-203ENST00000593829 CBR4Q8N4T8 237 aa18.1■□□□□ 0.49
LSM4-203ENST00000593829 SIMC1Q8NDZ2 872 aa18.1■□□□□ 0.49
LSM4-203ENST00000593829 OR7G2Q8NG99 324 aa18.1■□□□□ 0.49
LSM4-203ENST00000593829 C5orf34Q96MH7 638 aa18.1■□□□□ 0.49
LSM4-203ENST00000593829 RYDENQ9NUL5 291 aaKnown RBP18.1■□□□□ 0.49
LSM4-203ENST00000593829 TBC1D23Q9NUY8 699 aa18.1■□□□□ 0.49
LSM4-203ENST00000593829 HPF1Q9NWY4 346 aa18.1■□□□□ 0.49
LSM4-203ENST00000593829 ERVK-11Q9UQG0 969 aa18.1■□□□□ 0.49
LSM4-203ENST00000593829 PCDHGB6Q9Y5F9 930 aa18.1■□□□□ 0.49
LSM4-203ENST00000593829 NME4O00746 187 aa18.1■□□□□ 0.49
LSM4-203ENST00000593829 LAMP1P11279 417 aa18.1■□□□□ 0.49
LSM4-203ENST00000593829 ZNF12P17014 697 aa18.1■□□□□ 0.49
LSM4-203ENST00000593829 MLLT10P55197 1068 aa18.1■□□□□ 0.49
LSM4-203ENST00000593829 TMEM107Q6UX40 140 aa18.1■□□□□ 0.49
LSM4-203ENST00000593829 IL20RBQ6UXL0 311 aa18.1■□□□□ 0.49
LSM4-203ENST00000593829 ZNF551Q7Z340 670 aaPredicted RBP18.1■□□□□ 0.49
LSM4-203ENST00000593829 TAGAPQ8N103 731 aa18.1■□□□□ 0.49
LSM4-203ENST00000593829 NATD1Q8N6N6 113 aa18.1■□□□□ 0.49
LSM4-203ENST00000593829 ZNF441Q8N8Z8 693 aa18.1■□□□□ 0.49
LSM4-203ENST00000593829 C17orf47Q8NEP4 570 aa18.1■□□□□ 0.49
LSM4-203ENST00000593829 PNPT1Q8TCS8 783 aaKnown RBP18.1■□□□□ 0.49
LSM4-203ENST00000593829 TSPEARQ8WU66 669 aa18.1■□□□□ 0.49
LSM4-203ENST00000593829 ADIPOR1Q96A54 375 aa18.1■□□□□ 0.49
LSM4-203ENST00000593829 TMEM125Q96AQ2 219 aa18.1■□□□□ 0.49
LSM4-203ENST00000593829 COQ8BQ96D53 544 aa18.1■□□□□ 0.49
LSM4-203ENST00000593829 DPY30Q9C005 99 aa18.1■□□□□ 0.49
LSM4-203ENST00000593829 ANKRA2Q9H9E1 313 aa18.1■□□□□ 0.49
LSM4-203ENST00000593829 A0A087WV62 115 aa18.09■□□□□ 0.49
LSM4-203ENST00000593829 ZNF354AO60765 605 aaPredicted RBP18.09■□□□□ 0.49
LSM4-203ENST00000593829 SLC25A12O75746 678 aa18.09■□□□□ 0.49
LSM4-203ENST00000593829 ALDOCP09972 364 aaKnown RBP18.09■□□□□ 0.49
LSM4-203ENST00000593829 PSMA4P25789 261 aaKnown RBP18.09■□□□□ 0.49
LSM4-203ENST00000593829 GPC1P35052 558 aa18.09■□□□□ 0.49
LSM4-203ENST00000593829 MC3RP41968 323 aa18.09■□□□□ 0.49
LSM4-203ENST00000593829 MRPL19P49406 292 aaKnown RBP18.09■□□□□ 0.49
LSM4-203ENST00000593829 EMDP50402 254 aa18.09■□□□□ 0.49
LSM4-203ENST00000593829 TLE1Q04724 770 aa18.09■□□□□ 0.49
LSM4-203ENST00000593829 HSPB3Q12988 150 aa18.09■□□□□ 0.49
LSM4-203ENST00000593829 FHL5Q5TD97 284 aa18.09■□□□□ 0.49
LSM4-203ENST00000593829 SLC25A25Q6KCM7 469 aa18.09■□□□□ 0.49
LSM4-203ENST00000593829 ZNF227Q86WZ6 799 aa18.09■□□□□ 0.49
LSM4-203ENST00000593829 ZNF786Q8N393 782 aa18.09■□□□□ 0.49
LSM4-203ENST00000593829 ZBTB8BQ8NAP8 495 aaPredicted RBP18.09■□□□□ 0.49
LSM4-203ENST00000593829 TMEM178AQ8NBL3 297 aa18.09■□□□□ 0.49
LSM4-203ENST00000593829 PAPD5Q8NDF8 572 aaKnown RBP18.09■□□□□ 0.49
LSM4-203ENST00000593829 ELP4Q96EB1 424 aa18.09■□□□□ 0.49
LSM4-203ENST00000593829 SCMH1Q96GD3 660 aa18.09■□□□□ 0.49
LSM4-203ENST00000593829 MAP10Q9P2G4 905 aa18.09■□□□□ 0.49
LSM4-203ENST00000593829 DTX4Q9Y2E6 619 aa18.09■□□□□ 0.49
LSM4-203ENST00000593829 NADKO95544 446 aaPredicted RBP18.08■□□□□ 0.49
LSM4-203ENST00000593829 SP1P08047 785 aa18.08■□□□□ 0.49
LSM4-203ENST00000593829 INHBBP09529 407 aa18.08■□□□□ 0.49
LSM4-203ENST00000593829 IFI6P09912 130 aa18.08■□□□□ 0.49
LSM4-203ENST00000593829 NR0B1P51843 470 aaKnown RBP18.08■□□□□ 0.49
LSM4-203ENST00000593829 INPP5JQ15735 1006 aaPredicted RBP18.08■□□□□ 0.49
LSM4-203ENST00000593829 RETREG3Q86VR2 466 aa18.08■□□□□ 0.49
LSM4-203ENST00000593829 ADGRG5Q8IZF4 528 aa18.08■□□□□ 0.49
LSM4-203ENST00000593829 CISD2Q8N5K1 135 aaKnown RBP18.08■□□□□ 0.49
LSM4-203ENST00000593829 CPT1CQ8TCG5 803 aa18.08■□□□□ 0.49
LSM4-203ENST00000593829 NUDT8Q8WV74 236 aa18.08■□□□□ 0.49
LSM4-203ENST00000593829 ITPAQ9BY32 194 aa18.08■□□□□ 0.49
LSM4-203ENST00000593829 BHLHE41Q9C0J9 482 aaPredicted RBP18.08■□□□□ 0.49
LSM4-203ENST00000593829 KLHL1Q9NR64 748 aa18.08■□□□□ 0.49
LSM4-203ENST00000593829 AIG1Q9NVV5 245 aa18.08■□□□□ 0.49
LSM4-203ENST00000593829 GID8Q9NWU2 228 aa18.08■□□□□ 0.49
LSM4-203ENST00000593829 TAS2R9Q9NYW1 312 aa18.08■□□□□ 0.49
LSM4-203ENST00000593829 C19orf53Q9UNZ5 99 aaPredicted RBP18.08■□□□□ 0.49
LSM4-203ENST00000593829 ACOX3O15254 700 aa18.08■□□□□ 0.48
LSM4-203ENST00000593829 MAGEB3O15480 346 aa18.08■□□□□ 0.48
LSM4-203ENST00000593829 COQ9O75208 318 aa18.08■□□□□ 0.48
LSM4-203ENST00000593829 IDO1P14902 403 aa18.08■□□□□ 0.48
LSM4-203ENST00000593829 DCAF7P61962 342 aa18.08■□□□□ 0.48
LSM4-203ENST00000593829 MLC1Q15049 377 aa18.08■□□□□ 0.48
LSM4-203ENST00000593829 INAQ16352 499 aa18.08■□□□□ 0.48
LSM4-203ENST00000593829 PGS1Q32NB8 556 aa18.08■□□□□ 0.48
LSM4-203ENST00000593829 CAMKMTQ7Z624 323 aa18.08■□□□□ 0.48
LSM4-203ENST00000593829 SLC15A3Q8IY34 581 aa18.08■□□□□ 0.48
LSM4-203ENST00000593829 SNRNP40Q96DI7 357 aaKnown RBP18.08■□□□□ 0.48
LSM4-203ENST00000593829 PHF12Q96QT6 1004 aa18.08■□□□□ 0.48
LSM4-203ENST00000593829 DUSP26Q9BV47 211 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms