RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 FOXA1P55317 472 aa21.56■■□□□ 1.04
LSM4-202ENST00000593564 LTBQ06643 244 aa21.56■■□□□ 1.04
LSM4-202ENST00000593564 FGFBP1Q14512 234 aa21.56■■□□□ 1.04
LSM4-202ENST00000593564 FAM76AQ8TAV0 307 aa21.56■■□□□ 1.04
LSM4-202ENST00000593564 C1GALT1C1Q96EU7 318 aa21.56■■□□□ 1.04
LSM4-202ENST00000593564 PIGQQ9BRB3 760 aa21.56■■□□□ 1.04
LSM4-202ENST00000593564 SLC39A3Q9BRY0 314 aa21.56■■□□□ 1.04
LSM4-202ENST00000593564 OPN3Q9H1Y3 402 aaPredicted RBP21.56■■□□□ 1.04
LSM4-202ENST00000593564 GLIPR2Q9H4G4 154 aa21.56■■□□□ 1.04
LSM4-202ENST00000593564 RNF122Q9H9V4 155 aa21.56■■□□□ 1.04
LSM4-202ENST00000593564 DDX18Q9NVP1 670 aaKnown RBP21.56■■□□□ 1.04
LSM4-202ENST00000593564 KLHL28Q9NXS3 571 aa21.56■■□□□ 1.04
LSM4-202ENST00000593564 MRTO4Q9UKD2 239 aaKnown RBP21.56■■□□□ 1.04
LSM4-202ENST00000593564 H0YC42 278 aa21.55■■□□□ 1.04
LSM4-202ENST00000593564 GOLGA8RI6L899 631 aa21.55■■□□□ 1.04
LSM4-202ENST00000593564 UBFD1O14562 309 aaKnown RBP21.55■■□□□ 1.04
LSM4-202ENST00000593564 ARHGEF9O43307 516 aa21.55■■□□□ 1.04
LSM4-202ENST00000593564 CRYGSP22914 178 aa21.55■■□□□ 1.04
LSM4-202ENST00000593564 CCKARP32238 428 aa21.55■■□□□ 1.04
LSM4-202ENST00000593564 UGT2B10P36537 528 aa21.55■■□□□ 1.04
LSM4-202ENST00000593564 CLK3P49761 638 aaKnown RBP21.55■■□□□ 1.04
LSM4-202ENST00000593564 TPD52P55327 224 aaPredicted RBP21.55■■□□□ 1.04
LSM4-202ENST00000593564 OCRLQ01968 901 aa21.55■■□□□ 1.04
LSM4-202ENST00000593564 ZNHIT3Q15649 155 aaPredicted RBP21.55■■□□□ 1.04
LSM4-202ENST00000593564 IMPG1Q17R60 797 aa21.55■■□□□ 1.04
LSM4-202ENST00000593564 TRIM46Q7Z4K8 759 aa21.55■■□□□ 1.04
LSM4-202ENST00000593564 CNPY4Q8N129 248 aa21.55■■□□□ 1.04
LSM4-202ENST00000593564 LRRC75A-AS1Q8N1F1 130 aa21.55■■□□□ 1.04
LSM4-202ENST00000593564 CCNYL1Q8N7R7 359 aa21.55■■□□□ 1.04
LSM4-202ENST00000593564 ZNF592Q92610 1267 aa21.55■■□□□ 1.04
LSM4-202ENST00000593564 ELP4Q96EB1 424 aa21.55■■□□□ 1.04
LSM4-202ENST00000593564 CCDC126Q96EE4 140 aa21.55■■□□□ 1.04
LSM4-202ENST00000593564 ZNF845Q96IR2 970 aaPredicted RBP21.55■■□□□ 1.04
LSM4-202ENST00000593564 AMDHD1Q96NU7 426 aa21.55■■□□□ 1.04
LSM4-202ENST00000593564 LMF2Q9BU23 707 aaKnown RBP21.55■■□□□ 1.04
LSM4-202ENST00000593564 MED18Q9BUE0 208 aa21.55■■□□□ 1.04
LSM4-202ENST00000593564 PINK1Q9BXM7 581 aa21.55■■□□□ 1.04
LSM4-202ENST00000593564 H3BML4 177 aa21.54■■□□□ 1.04
LSM4-202ENST00000593564 SEC14L5O43304 696 aa21.54■■□□□ 1.04
LSM4-202ENST00000593564 CGAP01215 116 aa21.54■■□□□ 1.04
LSM4-202ENST00000593564 IFI6P09912 130 aa21.54■■□□□ 1.04
LSM4-202ENST00000593564 CD8BP10966 210 aa21.54■■□□□ 1.04
LSM4-202ENST00000593564 POU2F1P14859 743 aa21.54■■□□□ 1.04
LSM4-202ENST00000593564 PSMD4P55036 377 aaKnown RBP21.54■■□□□ 1.04
LSM4-202ENST00000593564 SIRPAP78324 504 aa21.54■■□□□ 1.04
LSM4-202ENST00000593564 GLYR1Q49A26 553 aaPredicted RBP21.54■■□□□ 1.04
LSM4-202ENST00000593564 IKBIPQ70UQ0 350 aa21.54■■□□□ 1.04
LSM4-202ENST00000593564 OR5M1Q8NGP8 315 aa21.54■■□□□ 1.04
LSM4-202ENST00000593564 FNDC9Q8TBE3 224 aa21.54■■□□□ 1.04
LSM4-202ENST00000593564 DUSP19Q8WTR2 217 aa21.54■■□□□ 1.04
LSM4-202ENST00000593564 PIGTQ969N2 578 aa21.54■■□□□ 1.04
LSM4-202ENST00000593564 PSMC3IPQ9P2W1 217 aaPredicted RBP21.54■■□□□ 1.04
LSM4-202ENST00000593564 POLR3HQ9Y535 204 aaPredicted RBP21.54■■□□□ 1.04
LSM4-202ENST00000593564 ARID1AO14497 2285 aa21.54■■□□□ 1.04
LSM4-202ENST00000593564 IGLV3-32A0A0A0MS00 114 aa21.53■■□□□ 1.04
LSM4-202ENST00000593564 H3BQF6 201 aa21.53■■□□□ 1.04
LSM4-202ENST00000593564 SMPD2O60906 423 aa21.53■■□□□ 1.04
LSM4-202ENST00000593564 PYGBP11216 843 aa21.53■■□□□ 1.04
LSM4-202ENST00000593564 CLDN20P56880 219 aa21.53■■□□□ 1.04
LSM4-202ENST00000593564 NAA20P61599 178 aa21.53■■□□□ 1.04
LSM4-202ENST00000593564 PON3Q15166 354 aa21.53■■□□□ 1.04
LSM4-202ENST00000593564 GUSBP1Q15486 140 aa21.53■■□□□ 1.04
LSM4-202ENST00000593564 MARCH3Q86UD3 253 aa21.53■■□□□ 1.04
LSM4-202ENST00000593564 METTL25Q8N6Q8 603 aa21.53■■□□□ 1.04
LSM4-202ENST00000593564 MZB1Q8WU39 189 aa21.53■■□□□ 1.04
LSM4-202ENST00000593564 PIK3IP1Q96FE7 263 aa21.53■■□□□ 1.04
LSM4-202ENST00000593564 DCDC2Q9UHG0 476 aa21.53■■□□□ 1.04
LSM4-202ENST00000593564 EMCNQ9ULC0 261 aa21.53■■□□□ 1.04
LSM4-202ENST00000593564 AP4B1Q9Y6B7 739 aa21.53■■□□□ 1.04
LSM4-202ENST00000593564 TTC36A6NLP5 189 aa21.52■■□□□ 1.04
LSM4-202ENST00000593564 G3V2L1 256 aa21.52■■□□□ 1.04
LSM4-202ENST00000593564 C16orf97H3BN30 126 aa21.52■■□□□ 1.04
LSM4-202ENST00000593564 RSL1D1O76021 490 aaKnown RBP21.52■■□□□ 1.04
LSM4-202ENST00000593564 KCNJ5P48544 419 aa21.52■■□□□ 1.04
LSM4-202ENST00000593564 RPS3AP61247 264 aaKnown RBP21.52■■□□□ 1.04
LSM4-202ENST00000593564 Q5PR19 223 aa21.52■■□□□ 1.04
LSM4-202ENST00000593564 NOXRED1Q6NXP6 359 aa21.52■■□□□ 1.04
LSM4-202ENST00000593564 ZYG11AQ6WRX3 759 aa21.52■■□□□ 1.04
LSM4-202ENST00000593564 FRMD7Q6ZUT3 714 aa21.52■■□□□ 1.04
LSM4-202ENST00000593564 P3H2Q8IVL5 708 aa21.52■■□□□ 1.04
LSM4-202ENST00000593564 MARK4Q96L34 752 aa21.52■■□□□ 1.04
LSM4-202ENST00000593564 TBL1XR1Q9BZK7 514 aa21.52■■□□□ 1.04
LSM4-202ENST00000593564 C3orf14Q9HBI5 128 aa21.52■■□□□ 1.04
LSM4-202ENST00000593564 UTS2O95399 124 aa21.51■■□□□ 1.03
LSM4-202ENST00000593564 MYL2P10916 166 aa21.51■■□□□ 1.03
LSM4-202ENST00000593564 FCGR2AP12318 317 aa21.51■■□□□ 1.03
LSM4-202ENST00000593564 FPR1P21462 350 aa21.51■■□□□ 1.03
LSM4-202ENST00000593564 RFX3P48380 749 aa21.51■■□□□ 1.03
LSM4-202ENST00000593564 PRR5P85299 388 aa21.51■■□□□ 1.03
LSM4-202ENST00000593564 C17orf67Q0P5P2 114 aa21.51■■□□□ 1.03
LSM4-202ENST00000593564 ACKR1Q16570 336 aa21.51■■□□□ 1.03
LSM4-202ENST00000593564 TMEM44Q2T9K0 475 aa21.51■■□□□ 1.03
LSM4-202ENST00000593564 CLEC9AQ6UXN8 241 aa21.51■■□□□ 1.03
LSM4-202ENST00000593564 Q71RC1 249 aaPredicted RBP21.51■■□□□ 1.03
LSM4-202ENST00000593564 GFM2Q969S9 779 aaKnown RBP21.51■■□□□ 1.03
LSM4-202ENST00000593564 METTL2AQ96IZ6 378 aaKnown RBP21.51■■□□□ 1.03
LSM4-202ENST00000593564 ZNF395Q9H8N7 513 aaPredicted RBP21.51■■□□□ 1.03
LSM4-202ENST00000593564 RRAGDQ9NQL2 400 aaPredicted RBP21.51■■□□□ 1.03
LSM4-202ENST00000593564 PROCRQ9UNN8 238 aa21.51■■□□□ 1.03
LSM4-202ENST00000593564 FAM171A2A8MVW0 826 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms