RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 GLOD5A6NK44 160 aa8.6□□□□□ -1.03
BRCA1-226ENST00000591534 CLCA1A8K7I4 914 aa8.6□□□□□ -1.03
BRCA1-226ENST00000591534 CCDC22O60826 627 aa8.6□□□□□ -1.03
BRCA1-226ENST00000591534 EDF1O60869 148 aaKnown RBP8.6□□□□□ -1.03
BRCA1-226ENST00000591534 CBR3O75828 277 aa8.6□□□□□ -1.03
BRCA1-226ENST00000591534 UBOX5O94941 541 aa8.6□□□□□ -1.03
BRCA1-226ENST00000591534 SEMA3DO95025 777 aa8.6□□□□□ -1.03
BRCA1-226ENST00000591534 CLDN9O95484 217 aa8.6□□□□□ -1.03
BRCA1-226ENST00000591534 ENO1P06733 434 aaKnown RBP8.6□□□□□ -1.03
BRCA1-226ENST00000591534 TMIGD3P0DMS9 266 aaPredicted RBP8.6□□□□□ -1.03
BRCA1-226ENST00000591534 BMP7P18075 431 aa8.6□□□□□ -1.03
BRCA1-226ENST00000591534 CHMP24386 653 aa8.6□□□□□ -1.03
BRCA1-226ENST00000591534 CASP3P42574 277 aa8.6□□□□□ -1.03
BRCA1-226ENST00000591534 XKP51811 444 aa8.6□□□□□ -1.03
BRCA1-226ENST00000591534 ZNF136P52737 540 aa8.6□□□□□ -1.03
BRCA1-226ENST00000591534 HNRNPH2P55795 449 aaKnown RBP8.6□□□□□ -1.03
BRCA1-226ENST00000591534 FBXW4P57775 412 aa8.6□□□□□ -1.03
BRCA1-226ENST00000591534 DCAF7P61962 342 aa8.6□□□□□ -1.03
BRCA1-226ENST00000591534 PSPHP78330 225 aa8.6□□□□□ -1.03
BRCA1-226ENST00000591534 FUT7Q11130 342 aa8.6□□□□□ -1.03
BRCA1-226ENST00000591534 PCLAFQ15004 111 aa8.6□□□□□ -1.03
BRCA1-226ENST00000591534 PCBP2Q15366 365 aaKnown RBP eCLIP8.6□□□□□ -1.032e-7■■■□□ 17.1
BRCA1-226ENST00000591534 CPSF6Q16630 551 aaKnown RBP eCLIP8.6□□□□□ -1.03
BRCA1-226ENST00000591534 PFKFB4Q16877 469 aa8.6□□□□□ -1.03
BRCA1-226ENST00000591534 TIGD3Q6B0B8 471 aa8.6□□□□□ -1.03
BRCA1-226ENST00000591534 TTC19Q6DKK2 380 aaPredicted RBP8.6□□□□□ -1.03
BRCA1-226ENST00000591534 SLC30A6Q6NXT4 461 aa8.6□□□□□ -1.03
BRCA1-226ENST00000591534 AAGABQ6PD74 315 aa8.6□□□□□ -1.03
BRCA1-226ENST00000591534 VHLLQ6RSH7 139 aa8.6□□□□□ -1.03
BRCA1-226ENST00000591534 DGAT2L6Q6ZPD8 337 aa8.6□□□□□ -1.03
BRCA1-226ENST00000591534 RPS27LQ71UM5 84 aaKnown RBP8.6□□□□□ -1.03
BRCA1-226ENST00000591534 NUP54Q7Z3B4 507 aa8.6□□□□□ -1.03
BRCA1-226ENST00000591534 C10orf107Q8IVU9 208 aa8.6□□□□□ -1.03
BRCA1-226ENST00000591534 ZNF441Q8N8Z8 693 aa8.6□□□□□ -1.03
BRCA1-226ENST00000591534 CCDC197Q8NCU1 140 aa8.6□□□□□ -1.03
BRCA1-226ENST00000591534 NAXEQ8NCW5 288 aa8.6□□□□□ -1.03
BRCA1-226ENST00000591534 MBD3L2Q8NHZ7 208 aaPredicted RBP8.6□□□□□ -1.03
BRCA1-226ENST00000591534 FAM46AQ96IP4 442 aaKnown RBP8.6□□□□□ -1.03
BRCA1-226ENST00000591534 C18orf12Q96KH6 178 aa8.6□□□□□ -1.03
BRCA1-226ENST00000591534 ZNF317Q96PQ6 595 aaPredicted RBP8.6□□□□□ -1.03
BRCA1-226ENST00000591534 CCT8L2Q96SF2 557 aa8.6□□□□□ -1.03
BRCA1-226ENST00000591534 RBM24Q9BX46 236 aaKnown RBP8.6□□□□□ -1.03
BRCA1-226ENST00000591534 SORBS1Q9BX66 1292 aaKnown RBP8.6□□□□□ -1.03
BRCA1-226ENST00000591534 UBQLN3Q9H347 655 aa8.6□□□□□ -1.03
BRCA1-226ENST00000591534 PIGMQ9H3S5 423 aa8.6□□□□□ -1.03
BRCA1-226ENST00000591534 IPPKQ9H8X2 491 aa8.6□□□□□ -1.03
BRCA1-226ENST00000591534 DLL4Q9NR61 685 aa8.6□□□□□ -1.03
BRCA1-226ENST00000591534 CPSF2Q9P2I0 782 aaKnown RBP8.6□□□□□ -1.03
BRCA1-226ENST00000591534 ADAM29Q9UKF5 820 aa8.6□□□□□ -1.03
BRCA1-226ENST00000591534 ARL2BPQ9Y2Y0 163 aa8.6□□□□□ -1.03
BRCA1-226ENST00000591534 ABCA2Q9BZC7 2435 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.59□□□□□ -1.03
BRCA1-226ENST00000591534 G3V2L1 256 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 H0Y3Z8 333 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 RGS13O14921 159 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 ACOX3O15254 700 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 PDPK1O15530 556 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 HNRNPCL1O60812 293 aaKnown RBP8.59□□□□□ -1.03
BRCA1-226ENST00000591534 SNNO75324 88 aaPredicted RBP8.59□□□□□ -1.03
BRCA1-226ENST00000591534 EEDO75530 441 aaKnown RBP8.59□□□□□ -1.03
BRCA1-226ENST00000591534 PPM1BO75688 479 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 ATP5HO75947 161 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 SUPT7LO94864 414 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 LRATO95237 230 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 SIX3O95343 332 aaPredicted RBP8.59□□□□□ -1.03
BRCA1-226ENST00000591534 AIFM1O95831 613 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 TP53P04637 393 aaPredicted RBP8.59□□□□□ -1.03
BRCA1-226ENST00000591534 SBK3P0C264 359 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 CPN1P15169 458 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 PORP16435 677 aaPredicted RBP8.59□□□□□ -1.03
BRCA1-226ENST00000591534 DDX5P17844 614 aaKnown RBP8.59□□□□□ -1.03
BRCA1-226ENST00000591534 NT5EP21589 574 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 ABCD3P28288 659 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 SSTR4P31391 388 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 BSGP35613 385 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 RASSF2P50749 326 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 RPL14P50914 215 aaKnown RBP8.59□□□□□ -1.03
BRCA1-226ENST00000591534 MNAT1P51948 309 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 NAGLUP54802 743 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 IFT88Q13099 833 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 GTF2H2Q13888 395 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 SPDYAQ5MJ70 313 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 GTF2H2CQ6P1K8 395 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 TMEM81Q6P7N7 255 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 Q6ZS46 218 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 FRMD7Q6ZUT3 714 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 CHMP1BQ7LBR1 199 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 SPATA21Q7Z572 469 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 MMP21Q8N119 569 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 LILRB2Q8N423 598 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 CCNYL1Q8N7R7 359 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 L3MBTL4Q8NA19 623 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 OR14L1PQ8NHC6 308 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 LINC01560Q8TB33 94 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 SMPDL3BQ92485 455 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 TMCO6Q96DC7 493 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 WDYHV1Q96HA8 205 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 METTL2AQ96IZ6 378 aaKnown RBP8.59□□□□□ -1.03
BRCA1-226ENST00000591534 UGT2B28Q9BY64 529 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 RABEP2Q9H5N1 569 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms