RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 LDAHQ9H6V9 325 aa16.44■□□□□ 0.22
VAT1-208ENST00000590924 CNIH4Q9P003 139 aa16.44■□□□□ 0.22
VAT1-208ENST00000590924 TNFRSF10DQ9UBN6 386 aa16.44■□□□□ 0.22
VAT1-208ENST00000590924 BCAP29Q9UHQ4 241 aa16.44■□□□□ 0.22
VAT1-208ENST00000590924 CHCHD2Q9Y6H1 151 aaPredicted RBP16.44■□□□□ 0.22
VAT1-208ENST00000590924 AKAP6Q13023 2319 aa16.44■□□□□ 0.22
VAT1-208ENST00000590924 TRGV5A0A0B4J1U4 118 aa16.43■□□□□ 0.22
VAT1-208ENST00000590924 C2orf92A0A1B0GVN3 265 aa16.43■□□□□ 0.22
VAT1-208ENST00000590924 LRRC3CA6NJW4 275 aa16.43■□□□□ 0.22
VAT1-208ENST00000590924 UPK1AO00322 258 aa16.43■□□□□ 0.22
VAT1-208ENST00000590924 EMC8O43402 210 aa16.43■□□□□ 0.22
VAT1-208ENST00000590924 CCDC22O60826 627 aa16.43■□□□□ 0.22
VAT1-208ENST00000590924 PSMG1O95456 288 aa16.43■□□□□ 0.22
VAT1-208ENST00000590924 HOXD4P09016 255 aaPredicted RBP16.43■□□□□ 0.22
VAT1-208ENST00000590924 GLI4P10075 376 aa16.43■□□□□ 0.22
VAT1-208ENST00000590924 ENDOUP21128 410 aaKnown RBP16.43■□□□□ 0.22
VAT1-208ENST00000590924 MC3RP41968 323 aa16.43■□□□□ 0.22
VAT1-208ENST00000590924 EMDP50402 254 aa16.43■□□□□ 0.22
VAT1-208ENST00000590924 PSPHP78330 225 aa16.43■□□□□ 0.22
VAT1-208ENST00000590924 PRR5P85299 388 aa16.43■□□□□ 0.22
VAT1-208ENST00000590924 RCAN2Q14206 197 aa16.43■□□□□ 0.22
VAT1-208ENST00000590924 NTRK2Q16620 822 aa16.43■□□□□ 0.22
VAT1-208ENST00000590924 TMEM107Q6UX40 140 aa16.43■□□□□ 0.22
VAT1-208ENST00000590924 FUNDC1Q8IVP5 155 aa16.43■□□□□ 0.22
VAT1-208ENST00000590924 FAM13CQ8NE31 585 aa16.43■□□□□ 0.22
VAT1-208ENST00000590924 OR52R1Q8NGF1 315 aa16.43■□□□□ 0.22
VAT1-208ENST00000590924 OR10Q1Q8NGQ4 319 aa16.43■□□□□ 0.22
VAT1-208ENST00000590924 DOK4Q8TEW6 326 aa16.43■□□□□ 0.22
VAT1-208ENST00000590924 EXO5Q9H790 373 aa16.43■□□□□ 0.22
VAT1-208ENST00000590924 RMND5AQ9H871 391 aa16.43■□□□□ 0.22
VAT1-208ENST00000590924 PROK2Q9HC23 129 aa16.43■□□□□ 0.22
VAT1-208ENST00000590924 SLC24A3Q9HC58 644 aa16.43■□□□□ 0.22
VAT1-208ENST00000590924 ZFP64Q9NPA5 681 aa16.43■□□□□ 0.22
VAT1-208ENST00000590924 SIRT3Q9NTG7 399 aaPredicted RBP16.43■□□□□ 0.22
VAT1-208ENST00000590924 DDX18Q9NVP1 670 aaKnown RBP16.43■□□□□ 0.22
VAT1-208ENST00000590924 QPCTLQ9NXS2 382 aa16.43■□□□□ 0.22
VAT1-208ENST00000590924 KCNN3Q9UGI6 736 aa16.43■□□□□ 0.22
VAT1-208ENST00000590924 ACAD8Q9UKU7 415 aa16.43■□□□□ 0.22
VAT1-208ENST00000590924 PCDHGB3Q9Y5G1 929 aa16.43■□□□□ 0.22
VAT1-208ENST00000590924 ANKHD1Q8IWZ3 2542 aaKnown RBP16.42■□□□□ 0.22
VAT1-208ENST00000590924 A0A0G2JNJ9 132 aa16.42■□□□□ 0.22
VAT1-208ENST00000590924 SLC22A2O15244 555 aa16.42■□□□□ 0.22
VAT1-208ENST00000590924 CFLARO15519 480 aa16.42■□□□□ 0.22
VAT1-208ENST00000590924 SOX30O94993 753 aa16.42■□□□□ 0.22
VAT1-208ENST00000590924 C6orf47O95873 294 aa16.42■□□□□ 0.22
VAT1-208ENST00000590924 GABRA1P14867 456 aa16.42■□□□□ 0.22
VAT1-208ENST00000590924 DRD5P21918 477 aa16.42■□□□□ 0.22
VAT1-208ENST00000590924 PPICP45877 212 aa16.42■□□□□ 0.22
VAT1-208ENST00000590924 CDK9P50750 372 aaKnown RBP16.42■□□□□ 0.22
VAT1-208ENST00000590924 DGKQP52824 942 aa16.42■□□□□ 0.22
VAT1-208ENST00000590924 HBA1P69905 142 aa16.42■□□□□ 0.22
VAT1-208ENST00000590924 DUSP8Q13202 625 aa16.42■□□□□ 0.22
VAT1-208ENST00000590924 EXOSC7Q15024 291 aaKnown RBP16.42■□□□□ 0.22
VAT1-208ENST00000590924 AGKQ53H12 422 aa16.42■□□□□ 0.22
VAT1-208ENST00000590924 C1orf185Q5T7R7 199 aa16.42■□□□□ 0.22
VAT1-208ENST00000590924 HLA-DQA1Q5Y7H0 255 aa16.42■□□□□ 0.22
VAT1-208ENST00000590924 ZCCHC12Q6PEW1 402 aa16.42■□□□□ 0.22
VAT1-208ENST00000590924 BHLHB9Q6PI77 547 aa16.42■□□□□ 0.22
VAT1-208ENST00000590924 SPNS3Q6ZMD2 512 aa16.42■□□□□ 0.22
VAT1-208ENST00000590924 ZNF441Q8N8Z8 693 aa16.42■□□□□ 0.22
VAT1-208ENST00000590924 OR10G3Q8NGC4 313 aa16.42■□□□□ 0.22
VAT1-208ENST00000590924 OR9I1Q8NGQ6 314 aa16.42■□□□□ 0.22
VAT1-208ENST00000590924 SFXN5Q8TD22 340 aa16.42■□□□□ 0.22
VAT1-208ENST00000590924 ADIPOR1Q96A54 375 aa16.42■□□□□ 0.22
VAT1-208ENST00000590924 FAM107BQ9H098 131 aa16.42■□□□□ 0.22
VAT1-208ENST00000590924 ACKR4Q9NPB9 350 aa16.42■□□□□ 0.22
VAT1-208ENST00000590924 SAR1AQ9NR31 198 aa16.42■□□□□ 0.22
VAT1-208ENST00000590924 CCDC167Q9P0B6 97 aa16.42■□□□□ 0.22
VAT1-208ENST00000590924 SPRR3Q9UBC9 169 aa16.42■□□□□ 0.22
VAT1-208ENST00000590924 Q9UFV3 132 aa16.42■□□□□ 0.22
VAT1-208ENST00000590924 CNOT11Q9UKZ1 510 aaKnown RBP16.42■□□□□ 0.22
VAT1-208ENST00000590924 KIAA1549Q9HCM3 1950 aa16.42■□□□□ 0.22
VAT1-208ENST00000590924 MED12Q93074 2177 aa16.41■□□□□ 0.22
VAT1-208ENST00000590924 FAM47E-STBD1D6RA91 191 aa16.41■□□□□ 0.22
VAT1-208ENST00000590924 RFPL3SP0C7P2 107 aa16.41■□□□□ 0.22
VAT1-208ENST00000590924 TRPC1P48995 793 aa16.41■□□□□ 0.22
VAT1-208ENST00000590924 CCT3P49368 545 aaKnown RBP16.41■□□□□ 0.22
VAT1-208ENST00000590924 TBCELQ5QJ74 424 aa16.41■□□□□ 0.22
VAT1-208ENST00000590924 TAGAPQ8N103 731 aa16.41■□□□□ 0.22
VAT1-208ENST00000590924 OR56A1Q8NGH5 318 aa16.41■□□□□ 0.22
VAT1-208ENST00000590924 HSPBAP1Q96EW2 488 aa16.41■□□□□ 0.22
VAT1-208ENST00000590924 CCT8L2Q96SF2 557 aa16.41■□□□□ 0.22
VAT1-208ENST00000590924 ZNF559Q9BR84 538 aa16.41■□□□□ 0.22
VAT1-208ENST00000590924 CXorf36Q9H7Y0 433 aa16.41■□□□□ 0.22
VAT1-208ENST00000590924 SLC52A3Q9NQ40 469 aa16.41■□□□□ 0.22
VAT1-208ENST00000590924 GPR55Q9Y2T6 319 aaPredicted RBP16.41■□□□□ 0.22
VAT1-208ENST00000590924 ANKRD33BA6NCL7 494 aa16.4■□□□□ 0.22
VAT1-208ENST00000590924 CCDC154A6NI56 674 aa16.4■□□□□ 0.22
VAT1-208ENST00000590924 CAPN14A8MX76 684 aa16.4■□□□□ 0.22
VAT1-208ENST00000590924 ACOX3O15254 700 aa16.4■□□□□ 0.22
VAT1-208ENST00000590924 FAM107AO95990 144 aa16.4■□□□□ 0.22
VAT1-208ENST00000590924 ZCCHC18P0CG32 403 aa16.4■□□□□ 0.22
VAT1-208ENST00000590924 EFNA1P20827 205 aaPredicted RBP16.4■□□□□ 0.22
VAT1-208ENST00000590924 UQCRC2P22695 453 aa16.4■□□□□ 0.22
VAT1-208ENST00000590924 ADH7P40394 386 aa16.4■□□□□ 0.22
VAT1-208ENST00000590924 RIPPLY3P57055 190 aa16.4■□□□□ 0.22
VAT1-208ENST00000590924 SF3A3Q12874 501 aaKnown RBP eCLIP16.4■□□□□ 0.22
VAT1-208ENST00000590924 SLC25A35Q3KQZ1 300 aa16.4■□□□□ 0.22
VAT1-208ENST00000590924 MTERF4Q7Z6M4 381 aaKnown RBP16.4■□□□□ 0.22
VAT1-208ENST00000590924 CLECL1Q8IZS7 167 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms