RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 RPTNQ6XPR3 784 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 LIMS2Q7Z4I7 341 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 MAP3K3Q99759 626 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 MED18Q9BUE0 208 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 MBD1Q9UIS9 605 aaPredicted RBP14.26□□□□□ -0.13
CIRBP-228ENST00000590347 C1orf226A1L170 272 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 ABCD4O14678 606 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 FMO6PO60774 539 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 BCHEP06276 602 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 ELAVL4P26378 380 aaKnown RBP14.26□□□□□ -0.13
CIRBP-228ENST00000590347 HOXC13P31276 330 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 AHRP35869 848 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 TRIM23P36406 574 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 AKR1C3P42330 323 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 MTNR1AP48039 350 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 SLC6A11P48066 632 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 RGS4P49798 205 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 TBX4P57082 545 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 S100A12P80511 92 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 SERINC3Q13530 473 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 FRG2Q64ET8 278 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 METAP1DQ6UB28 335 aaPredicted RBP14.26□□□□□ -0.13
CIRBP-228ENST00000590347 RAB11FIP2Q7L804 512 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 OR52N1Q8NH53 320 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 C3orf49Q96BT1 292 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 FRG2BQ96QU4 278 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 ASB8Q9H765 288 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 FBXW2Q9UKT8 454 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 OARD1Q9Y530 152 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 AP1M2Q9Y6Q5 423 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 CACNA1CQ13936 2221 aa14.25□□□□□ -0.13
CIRBP-228ENST00000590347 GREM1O60565 184 aa14.25□□□□□ -0.13
CIRBP-228ENST00000590347 SLC2A10O95528 541 aa14.25□□□□□ -0.13
CIRBP-228ENST00000590347 HOXB6P17509 224 aaKnown RBP14.25□□□□□ -0.13
CIRBP-228ENST00000590347 ACVR1BP36896 505 aa14.25□□□□□ -0.13
CIRBP-228ENST00000590347 SRSF11Q05519 484 aaKnown RBP14.25□□□□□ -0.13
CIRBP-228ENST00000590347 GK2Q14410 553 aaPredicted RBP14.25□□□□□ -0.13
CIRBP-228ENST00000590347 ZNF660Q6AZW8 331 aaPredicted RBP14.25□□□□□ -0.13
CIRBP-228ENST00000590347 PGBD2Q6P3X8 592 aa14.25□□□□□ -0.13
CIRBP-228ENST00000590347 STK35Q8TDR2 534 aa14.25□□□□□ -0.13
CIRBP-228ENST00000590347 ADAMTS19Q8TE59 1207 aa14.25□□□□□ -0.13
CIRBP-228ENST00000590347 CMTM7Q96FZ5 175 aa14.25□□□□□ -0.13
CIRBP-228ENST00000590347 MS4A4EQ96PG1 132 aa14.25□□□□□ -0.13
CIRBP-228ENST00000590347 TRIB3Q96RU7 358 aa14.25□□□□□ -0.13
CIRBP-228ENST00000590347 ADAM2Q99965 735 aa14.25□□□□□ -0.13
CIRBP-228ENST00000590347 CINPQ9BW66 212 aaPredicted RBP14.25□□□□□ -0.13
CIRBP-228ENST00000590347 CNIH4Q9P003 139 aa14.25□□□□□ -0.13
CIRBP-228ENST00000590347 ATXN7L1Q9ULK2 861 aaPredicted RBP14.25□□□□□ -0.13
CIRBP-228ENST00000590347 IGLV3-25P01717 112 aa14.25□□□□□ -0.13
CIRBP-228ENST00000590347 HLA-DPB1P04440 258 aa14.25□□□□□ -0.13
CIRBP-228ENST00000590347 KLK3P07288 261 aaPredicted RBP14.25□□□□□ -0.13
CIRBP-228ENST00000590347 GABRA1P14867 456 aa14.25□□□□□ -0.13
CIRBP-228ENST00000590347 FPR3P25089 353 aa14.25□□□□□ -0.13
CIRBP-228ENST00000590347 SLC1A3P43003 542 aa14.25□□□□□ -0.13
CIRBP-228ENST00000590347 UBE2IP63279 158 aaKnown RBP14.25□□□□□ -0.13
CIRBP-228ENST00000590347 MTAPQ13126 283 aa14.25□□□□□ -0.13
CIRBP-228ENST00000590347 CMIPQ8IY22 773 aa14.25□□□□□ -0.13
CIRBP-228ENST00000590347 OR11G2Q8NGC1 345 aa14.25□□□□□ -0.13
CIRBP-228ENST00000590347 ZSCAN32Q9NX65 697 aa14.25□□□□□ -0.13
CIRBP-228ENST00000590347 TESQ9UGI8 421 aaKnown RBP14.25□□□□□ -0.13
CIRBP-228ENST00000590347 PLEKHM1Q9Y4G2 1056 aa14.25□□□□□ -0.13
CIRBP-228ENST00000590347 TRDV1A0A1B0GX56 115 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 AGAP14A8MT82 685 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 DUSP11O75319 330 aaKnown RBP14.24□□□□□ -0.13
CIRBP-228ENST00000590347 PRKAR2AP13861 404 aaKnown RBP14.24□□□□□ -0.13
CIRBP-228ENST00000590347 KCNE1P15382 129 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 RPE65Q16518 533 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 MANEAQ5SRI9 462 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 PLBD1Q6P4A8 553 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 TRIM40Q6P9F5 258 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 NCEH1Q6PIU2 408 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 LINGO2Q7L985 606 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 OAFQ86UD1 273 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 ARIH2OSQ8N7S6 290 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 FAM124BQ9H5Z6 455 aaPredicted RBP14.24□□□□□ -0.13
CIRBP-228ENST00000590347 SPHK1Q9NYA1 384 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 DERAQ9Y315 318 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 DNAH14Q0VDD8 3507 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 MAGEB4O15481 346 aaPredicted RBP14.24□□□□□ -0.13
CIRBP-228ENST00000590347 SLC19A2O60779 497 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 PEX14O75381 377 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 ZNF35P13682 527 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 CD22P20273 847 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 LIMS1P48059 325 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 GIPRP48546 466 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 STXBP1P61764 594 aaKnown RBP14.24□□□□□ -0.13
CIRBP-228ENST00000590347 CDC42EP1Q00587 391 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 SP140Q13342 867 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 FAM26DQ5JW98 314 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 C12orf73Q69YU5 71 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 SLC30A6Q6NXT4 461 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 KCT2Q8NC54 265 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 OR51G2Q8NGK0 314 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 OR14A16Q8NHC5 309 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 CA5BP1Q8WTZ4 195 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 MED8Q96G25 268 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 SCLYQ96I15 445 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 ARHGAP9Q9BRR9 750 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 ABCC13Q9NSE7 274 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 PHF11Q9UIL8 331 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms