RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 PMPCAQ10713 525 aa16.57■□□□□ 0.24
DDX39A-212ENST00000590260 LASP1Q14847 261 aaKnown RBP16.57■□□□□ 0.24
DDX39A-212ENST00000590260 ZNHIT3Q15649 155 aaPredicted RBP16.57■□□□□ 0.24
DDX39A-212ENST00000590260 CCNJQ5T5M9 372 aa16.57■□□□□ 0.24
DDX39A-212ENST00000590260 FIGNL1Q6PIW4 674 aa16.57■□□□□ 0.24
DDX39A-212ENST00000590260 SZRD1Q7Z422 152 aa16.57■□□□□ 0.24
DDX39A-212ENST00000590260 MARCH3Q86UD3 253 aa16.57■□□□□ 0.24
DDX39A-212ENST00000590260 CCDC71Q8IV32 467 aaPredicted RBP16.57■□□□□ 0.24
DDX39A-212ENST00000590260 ULK2Q8IYT8 1036 aa16.57■□□□□ 0.24
DDX39A-212ENST00000590260 KIRREL3Q8IZU9 778 aa16.57■□□□□ 0.24
DDX39A-212ENST00000590260 OR8J2Q8NGG1 315 aa16.57■□□□□ 0.24
DDX39A-212ENST00000590260 OR4C3Q8NH37 302 aa16.57■□□□□ 0.24
DDX39A-212ENST00000590260 OR5AK3PQ8NH89 298 aa16.57■□□□□ 0.24
DDX39A-212ENST00000590260 TESCQ96BS2 214 aa16.57■□□□□ 0.24
DDX39A-212ENST00000590260 KLHDC3Q9BQ90 382 aa16.57■□□□□ 0.24
DDX39A-212ENST00000590260 PRDM14Q9GZV8 571 aa16.57■□□□□ 0.24
DDX39A-212ENST00000590260 EXO5Q9H790 373 aa16.57■□□□□ 0.24
DDX39A-212ENST00000590260 VIPAS39Q9H9C1 493 aa16.57■□□□□ 0.24
DDX39A-212ENST00000590260 ATAD3AQ9NVI7 634 aa16.57■□□□□ 0.24
DDX39A-212ENST00000590260 FAM120CQ9NX05 1096 aaKnown RBP16.57■□□□□ 0.24
DDX39A-212ENST00000590260 KLF2Q9Y5W3 355 aaPredicted RBP16.57■□□□□ 0.24
DDX39A-212ENST00000590260 SNX8Q9Y5X2 465 aa16.57■□□□□ 0.24
DDX39A-212ENST00000590260 CRYBG3Q68DQ2 2970 aa16.57■□□□□ 0.24
DDX39A-212ENST00000590260 CELSR2Q9HCU4 2923 aa16.57■□□□□ 0.24
DDX39A-212ENST00000590260 ARHGAP21Q5T5U3 1957 aa16.57■□□□□ 0.24
DDX39A-212ENST00000590260 C15orf38-AP3S2A0A0A6YYH1 394 aa16.56■□□□□ 0.24
DDX39A-212ENST00000590260 PRSS44E7EML9 344 aa16.56■□□□□ 0.24
DDX39A-212ENST00000590260 TOXO94900 526 aa16.56■□□□□ 0.24
DDX39A-212ENST00000590260 CLDN14O95500 239 aa16.56■□□□□ 0.24
DDX39A-212ENST00000590260 ZFP36L2P47974 494 aaKnown RBP16.56■□□□□ 0.24
DDX39A-212ENST00000590260 RFX3P48380 749 aa16.56■□□□□ 0.24
DDX39A-212ENST00000590260 SMSP52788 366 aa16.56■□□□□ 0.24
DDX39A-212ENST00000590260 NME5P56597 212 aa16.56■□□□□ 0.24
DDX39A-212ENST00000590260 B3GALT5-AS1P59052 145 aa16.56■□□□□ 0.24
DDX39A-212ENST00000590260 ZNF630Q2M218 657 aaPredicted RBP16.56■□□□□ 0.24
DDX39A-212ENST00000590260 SPANXN4Q5MJ08 99 aa16.56■□□□□ 0.24
DDX39A-212ENST00000590260 WLSQ5T9L3 541 aa16.56■□□□□ 0.24
DDX39A-212ENST00000590260 ZCCHC12Q6PEW1 402 aa16.56■□□□□ 0.24
DDX39A-212ENST00000590260 HDXQ7Z353 690 aa16.56■□□□□ 0.24
DDX39A-212ENST00000590260 ANKRD46Q86W74 232 aa16.56■□□□□ 0.24
DDX39A-212ENST00000590260 NATD1Q8N6N6 113 aa16.56■□□□□ 0.24
DDX39A-212ENST00000590260 OR2M3Q8NG83 312 aa16.56■□□□□ 0.24
DDX39A-212ENST00000590260 CDS1Q92903 461 aa16.56■□□□□ 0.24
DDX39A-212ENST00000590260 SDCCAG3Q96C92 435 aa16.56■□□□□ 0.24
DDX39A-212ENST00000590260 WDYHV1Q96HA8 205 aa16.56■□□□□ 0.24
DDX39A-212ENST00000590260 OR52B2Q96RD2 323 aa16.56■□□□□ 0.24
DDX39A-212ENST00000590260 DPY30Q9C005 99 aa16.56■□□□□ 0.24
DDX39A-212ENST00000590260 SLCO1B3Q9NPD5 702 aa16.56■□□□□ 0.24
DDX39A-212ENST00000590260 ABCG2Q9UNQ0 655 aa16.56■□□□□ 0.24
DDX39A-212ENST00000590260 PCNX1Q96RV3 2341 aa16.56■□□□□ 0.24
DDX39A-212ENST00000590260 MED12Q93074 2177 aa16.55■□□□□ 0.24
DDX39A-212ENST00000590260 NUP214P35658 2090 aaPredicted RBP16.55■□□□□ 0.24
DDX39A-212ENST00000590260 UNC79Q9P2D8 2635 aa16.55■□□□□ 0.24
DDX39A-212ENST00000590260 A0A0G2JNJ9 132 aa16.55■□□□□ 0.24
DDX39A-212ENST00000590260 RNASET2O00584 256 aaKnown RBP16.55■□□□□ 0.24
DDX39A-212ENST00000590260 WDR1O75083 606 aa16.55■□□□□ 0.24
DDX39A-212ENST00000590260 HTR1EP28566 365 aa16.55■□□□□ 0.24
DDX39A-212ENST00000590260 SRD5A2P31213 254 aa16.55■□□□□ 0.24
DDX39A-212ENST00000590260 RPS26P62854 115 aaKnown RBP16.55■□□□□ 0.24
DDX39A-212ENST00000590260 PRR5P85299 388 aa16.55■□□□□ 0.24
DDX39A-212ENST00000590260 TP53BP2Q13625 1128 aa16.55■□□□□ 0.24
DDX39A-212ENST00000590260 TOMM20Q15388 145 aa16.55■□□□□ 0.24
DDX39A-212ENST00000590260 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.55■□□□□ 0.24
DDX39A-212ENST00000590260 LSM12Q3MHD2 195 aaKnown RBP16.55■□□□□ 0.24
DDX39A-212ENST00000590260 C1orf185Q5T7R7 199 aa16.55■□□□□ 0.24
DDX39A-212ENST00000590260 SP5Q6BEB4 398 aaPredicted RBP16.55■□□□□ 0.24
DDX39A-212ENST00000590260 CDC73Q6P1J9 531 aa16.55■□□□□ 0.24
DDX39A-212ENST00000590260 LIX1LQ8IVB5 337 aa16.55■□□□□ 0.24
DDX39A-212ENST00000590260 TRIM42Q8IWZ5 723 aa16.55■□□□□ 0.24
DDX39A-212ENST00000590260 SFXN5Q8TD22 340 aa16.55■□□□□ 0.24
DDX39A-212ENST00000590260 MARK4Q96L34 752 aa16.55■□□□□ 0.24
DDX39A-212ENST00000590260 PRPF18Q99633 342 aaKnown RBP16.55■□□□□ 0.24
DDX39A-212ENST00000590260 G6PC3Q9BUM1 346 aa16.55■□□□□ 0.24
DDX39A-212ENST00000590260 DSN1Q9H410 356 aa16.55■□□□□ 0.24
DDX39A-212ENST00000590260 PIGUQ9H490 435 aa16.55■□□□□ 0.24
DDX39A-212ENST00000590260 MED11Q9P086 117 aa16.55■□□□□ 0.24
DDX39A-212ENST00000590260 Q9UFV3 132 aa16.55■□□□□ 0.24
DDX39A-212ENST00000590260 PCDHGB3Q9Y5G1 929 aa16.55■□□□□ 0.24
DDX39A-212ENST00000590260 FIGNL2A6NMB9 653 aa16.54■□□□□ 0.24
DDX39A-212ENST00000590260 KCNH1O95259 989 aa16.54■□□□□ 0.24
DDX39A-212ENST00000590260 OXSR1O95747 527 aaPredicted RBP16.54■□□□□ 0.24
DDX39A-212ENST00000590260 ALOX5P09917 674 aa16.54■□□□□ 0.24
DDX39A-212ENST00000590260 DDX5P17844 614 aaKnown RBP16.54■□□□□ 0.24
DDX39A-212ENST00000590260 KIR3DL1P43629 444 aa16.54■□□□□ 0.24
DDX39A-212ENST00000590260 PRIM2P49643 509 aa16.54■□□□□ 0.24
DDX39A-212ENST00000590260 DGKQP52824 942 aa16.54■□□□□ 0.24
DDX39A-212ENST00000590260 TFF3Q07654 80 aa16.54■□□□□ 0.24
DDX39A-212ENST00000590260 STX5Q13190 355 aa16.54■□□□□ 0.24
DDX39A-212ENST00000590260 VPS26BQ4G0F5 336 aa16.54■□□□□ 0.24
DDX39A-212ENST00000590260 TMEM211Q6ICI0 200 aa16.54■□□□□ 0.24
DDX39A-212ENST00000590260 B3GNT6Q6ZMB0 384 aa16.54■□□□□ 0.24
DDX39A-212ENST00000590260 SPATA19Q7Z5L4 167 aa16.54■□□□□ 0.24
DDX39A-212ENST00000590260 ACBD4Q8NC06 268 aa16.54■□□□□ 0.24
DDX39A-212ENST00000590260 NAXEQ8NCW5 288 aa16.54■□□□□ 0.24
DDX39A-212ENST00000590260 OR56A1Q8NGH5 318 aa16.54■□□□□ 0.24
DDX39A-212ENST00000590260 OR5D16Q8NGK9 328 aa16.54■□□□□ 0.24
DDX39A-212ENST00000590260 PIWIL2Q8TC59 973 aaKnown RBP16.54■□□□□ 0.24
DDX39A-212ENST00000590260 DUSP19Q8WTR2 217 aa16.54■□□□□ 0.24
DDX39A-212ENST00000590260 STACQ99469 402 aa16.54■□□□□ 0.24
DDX39A-212ENST00000590260 ACTRT3Q9BYD9 372 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms