RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 PIF1Q9H611 641 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 TMEM38AQ9H6F2 299 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 METTL7AQ9H8H3 244 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 ZNF71Q9NQZ8 489 aaPredicted RBP12.52□□□□□ -0.41
VMP1-210ENST00000589823 SACM1LQ9NTJ5 587 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 FBXO34Q9NWN3 711 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 CMTM6Q9NX76 183 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 CNIH4Q9P003 139 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 WDR45Q9Y484 360 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 CHCHD2Q9Y6H1 151 aaPredicted RBP12.52□□□□□ -0.41
VMP1-210ENST00000589823 PKD1L2Q7Z442 2459 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 ZZEF1O43149 2961 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 PRAMEF27A3QJZ7 478 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 NME4O00746 187 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 DNAJA2O60884 412 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 ICOSLGO75144 302 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 SP1P08047 785 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 CHRM4P08173 479 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 GUSBP08236 651 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 TFPTP0C1Z6 253 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 CCL3P10147 92 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 RASSF2P50749 326 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 EEFSECP57772 596 aaKnown RBP12.51□□□□□ -0.41
VMP1-210ENST00000589823 CDK6Q00534 326 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 LIPEQ05469 1076 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 FUT5Q11128 374 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 SCARB2Q14108 478 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 ZNF766Q5HY98 468 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 SLC25A25Q6KCM7 469 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 REEP3Q6NUK4 255 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 ERICH5Q6P6B1 374 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 RINLQ6ZS11 566 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 MDGA2Q7Z553 956 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 IFNEQ86WN2 208 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 CALHM3Q86XJ0 350 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 SLC30A8Q8IWU4 369 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 FBXW8Q8N3Y1 598 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 ZNF527Q8NB42 609 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 TMEM178AQ8NBL3 297 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 PSD4Q8NDX1 1056 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 SLC38A5Q8WUX1 472 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 MAL2Q969L2 176 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 WBP1Q96G27 269 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 NODALQ96S42 347 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 SLC25A18Q9H1K4 315 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 CACYBPQ9HB71 228 aaKnown RBP12.51□□□□□ -0.41
VMP1-210ENST00000589823 KLHL1Q9NR64 748 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 UBQLN4Q9NRR5 601 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 KLRF1Q9NZS2 232 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 TMEM181Q9P2C4 612 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 ABCD2Q9UBJ2 740 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 MKLN1Q9UL63 735 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 LHX6Q9UPM6 363 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 ANGPT4Q9Y264 503 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 KLF13Q9Y2Y9 288 aaPredicted RBP12.51□□□□□ -0.41
VMP1-210ENST00000589823 PCDHGA10Q9Y5H3 936 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 CSAG2Q9Y5P2 127 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 MGAQ8IWI9 3026 aa12.51□□□□□ -0.41
VMP1-210ENST00000589823 USP24Q9UPU5 2620 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 DSPP15924 2871 aaKnown RBP12.5□□□□□ -0.41
VMP1-210ENST00000589823 A0A0G2JPF8 293 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 PRAMEF25A6NGN4 478 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 FAM220BPB1ANY3 271 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 HNRNPCL2B2RXH8 293 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 HNRNPCL3B7ZW38 293 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 SCDO00767 359 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 GYG2O15488 501 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 KIAA0513O60268 411 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 FCMRO60667 390 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 HNRNPCL4P0DMR1 293 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 EVI2BP34910 448 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 CPOXP36551 454 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 DCTP40126 519 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 CD97P48960 835 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 GZMMP51124 257 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 ATP12AP54707 1039 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 CHRNEQ04844 493 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 ZNF169Q14929 603 aaPredicted RBP12.5□□□□□ -0.41
VMP1-210ENST00000589823 ADRM1Q16186 407 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 VMACQ2NL98 169 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 GRAMD1BQ3KR37 738 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 SAMD4BQ5PRF9 694 aaKnown RBP12.5□□□□□ -0.41
VMP1-210ENST00000589823 TBCELQ5QJ74 424 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 PRAMEF20Q5VT98 475 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 PRAMEF8Q5VWM4 474 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 PRAMEF7Q5VXH5 474 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 DESI1Q6ICB0 168 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 TMEM81Q6P7N7 255 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 BNC2Q6ZN30 1099 aaPredicted RBP12.5□□□□□ -0.41
VMP1-210ENST00000589823 FRRS1Q6ZNA5 592 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 Q6ZS92 163 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 ZAR1Q86SH2 424 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 ZNF227Q86WZ6 799 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 PTOV1Q86YD1 416 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 ZZZ3Q8IYH5 903 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 ZNF619Q8N2I2 560 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 RBMXL3Q8N7X1 1067 aaKnown RBP12.5□□□□□ -0.41
VMP1-210ENST00000589823 HIPK4Q8NE63 616 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 OR2T12Q8NG77 320 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 BBS10Q8TAM1 723 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms