RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 SOX30O94993 753 aa13.66□□□□□ -0.22
ACTN4-211ENST00000589528 IL3P08700 152 aa13.66□□□□□ -0.22
ACTN4-211ENST00000589528 RBP1P09455 135 aa13.66□□□□□ -0.22
ACTN4-211ENST00000589528 RFX3P48380 749 aa13.66□□□□□ -0.22
ACTN4-211ENST00000589528 GNG11P61952 73 aa13.66□□□□□ -0.22
ACTN4-211ENST00000589528 CAPRIN1Q14444 709 aaKnown RBP13.66□□□□□ -0.22
ACTN4-211ENST00000589528 GUSBP1Q15486 140 aa13.66□□□□□ -0.22
ACTN4-211ENST00000589528 DECR1Q16698 335 aa13.66□□□□□ -0.22
ACTN4-211ENST00000589528 RNF138Q8WVD3 245 aa13.66□□□□□ -0.22
ACTN4-211ENST00000589528 FBXW5Q969U6 566 aa13.66□□□□□ -0.22
ACTN4-211ENST00000589528 C1GALT1C1Q96EU7 318 aa13.66□□□□□ -0.22
ACTN4-211ENST00000589528 HBEGFQ99075 208 aa13.66□□□□□ -0.22
ACTN4-211ENST00000589528 VPS29Q9UBQ0 182 aa13.66□□□□□ -0.22
ACTN4-211ENST00000589528 NFU1Q9UMS0 254 aa13.66□□□□□ -0.22
ACTN4-211ENST00000589528 UTP11Q9Y3A2 253 aaKnown RBP13.66□□□□□ -0.22
ACTN4-211ENST00000589528 CUBNO60494 3623 aa13.65□□□□□ -0.22
ACTN4-211ENST00000589528 CD5LO43866 347 aa13.65□□□□□ -0.22
ACTN4-211ENST00000589528 SYNGR4O95473 234 aa13.65□□□□□ -0.22
ACTN4-211ENST00000589528 MPIP34949 423 aa13.65□□□□□ -0.22
ACTN4-211ENST00000589528 CAV1Q03135 178 aa13.65□□□□□ -0.22
ACTN4-211ENST00000589528 HEPACAMQ14CZ8 416 aa13.65□□□□□ -0.22
ACTN4-211ENST00000589528 ZNHIT3Q15649 155 aaPredicted RBP13.65□□□□□ -0.22
ACTN4-211ENST00000589528 CHRFAM7AQ494W8 412 aa13.65□□□□□ -0.22
ACTN4-211ENST00000589528 DUSP19Q8WTR2 217 aa13.65□□□□□ -0.22
ACTN4-211ENST00000589528 ZBED6CLQ96FA7 236 aaPredicted RBP13.65□□□□□ -0.22
ACTN4-211ENST00000589528 GPR78Q96P69 363 aa13.65□□□□□ -0.22
ACTN4-211ENST00000589528 BBS4Q96RK4 519 aa13.65□□□□□ -0.22
ACTN4-211ENST00000589528 TMEM204Q9BSN7 226 aa13.65□□□□□ -0.22
ACTN4-211ENST00000589528 TBL1XR1Q9BZK7 514 aa13.65□□□□□ -0.22
ACTN4-211ENST00000589528 PAQR5Q9NXK6 330 aaPredicted RBP13.65□□□□□ -0.22
ACTN4-211ENST00000589528 GRHL1Q9NZI5 618 aa13.65□□□□□ -0.22
ACTN4-211ENST00000589528 RNF14Q9UBS8 474 aa13.65□□□□□ -0.22
ACTN4-211ENST00000589528 MCM8Q9UJA3 840 aa13.65□□□□□ -0.22
ACTN4-211ENST00000589528 MRTO4Q9UKD2 239 aaKnown RBP13.65□□□□□ -0.22
ACTN4-211ENST00000589528 VDAC3Q9Y277 283 aa13.65□□□□□ -0.22
ACTN4-211ENST00000589528 RNF115Q9Y4L5 304 aa13.65□□□□□ -0.22
ACTN4-211ENST00000589528 A0A1W2PP18 115 aa13.64□□□□□ -0.23
ACTN4-211ENST00000589528 RAD51CO43502 376 aa13.64□□□□□ -0.23
ACTN4-211ENST00000589528 PCDH7O60245 1069 aa13.64□□□□□ -0.23
ACTN4-211ENST00000589528 FADS1O60427 444 aa13.64□□□□□ -0.23
ACTN4-211ENST00000589528 PLOD3O60568 738 aa13.64□□□□□ -0.23
ACTN4-211ENST00000589528 C8BP07358 591 aa13.64□□□□□ -0.23
ACTN4-211ENST00000589528 CDKN1AP38936 164 aa13.64□□□□□ -0.23
ACTN4-211ENST00000589528 SLC6A8P48029 635 aa13.64□□□□□ -0.23
ACTN4-211ENST00000589528 PSMD4P55036 377 aaKnown RBP13.64□□□□□ -0.23
ACTN4-211ENST00000589528 CTU2Q2VPK5 515 aaKnown RBP13.64□□□□□ -0.23
ACTN4-211ENST00000589528 GLYR1Q49A26 553 aaPredicted RBP13.64□□□□□ -0.23
ACTN4-211ENST00000589528 CYP27C1Q4G0S4 372 aa13.64□□□□□ -0.23
ACTN4-211ENST00000589528 LETMD1Q6P1Q0 360 aa13.64□□□□□ -0.23
ACTN4-211ENST00000589528 RPS27LQ71UM5 84 aaKnown RBP13.64□□□□□ -0.23
ACTN4-211ENST00000589528 MARCH3Q86UD3 253 aa13.64□□□□□ -0.23
ACTN4-211ENST00000589528 HIPK1Q86Z02 1210 aa13.64□□□□□ -0.23
ACTN4-211ENST00000589528 OR7G2Q8NG99 324 aa13.64□□□□□ -0.23
ACTN4-211ENST00000589528 FBXO25Q8TCJ0 367 aa13.64□□□□□ -0.23
ACTN4-211ENST00000589528 HS6ST2Q96MM7 605 aa13.64□□□□□ -0.23
ACTN4-211ENST00000589528 OR10A4Q9H209 315 aa13.64□□□□□ -0.23
ACTN4-211ENST00000589528 C12orf49Q9H741 205 aa13.64□□□□□ -0.23
ACTN4-211ENST00000589528 Q9N2J8 555 aa13.64□□□□□ -0.23
ACTN4-211ENST00000589528 NGBQ9NPG2 151 aa13.64□□□□□ -0.23
ACTN4-211ENST00000589528 GLRX2Q9NS18 164 aa13.64□□□□□ -0.23
ACTN4-211ENST00000589528 FAM120CQ9NX05 1096 aaKnown RBP13.64□□□□□ -0.23
ACTN4-211ENST00000589528 XPR1Q9UBH6 696 aa13.64□□□□□ -0.23
ACTN4-211ENST00000589528 GPR52Q9Y2T5 361 aa13.64□□□□□ -0.23
ACTN4-211ENST00000589528 SHISA8B8ZZ34 492 aa13.63□□□□□ -0.23
ACTN4-211ENST00000589528 SS18L1O75177 396 aaPredicted RBP13.63□□□□□ -0.23
ACTN4-211ENST00000589528 KRT6AP02538 564 aa13.63□□□□□ -0.23
ACTN4-211ENST00000589528 KRT6BP04259 564 aa13.63□□□□□ -0.23
ACTN4-211ENST00000589528 FESP07332 822 aa13.63□□□□□ -0.23
ACTN4-211ENST00000589528 CD3EP07766 207 aa13.63□□□□□ -0.23
ACTN4-211ENST00000589528 HSD3B1P14060 373 aa13.63□□□□□ -0.23
ACTN4-211ENST00000589528 TSPAN8P19075 237 aa13.63□□□□□ -0.23
ACTN4-211ENST00000589528 HSD3B2P26439 372 aa13.63□□□□□ -0.23
ACTN4-211ENST00000589528 ACVR1BP36896 505 aa13.63□□□□□ -0.23
ACTN4-211ENST00000589528 KRT6CP48668 564 aa13.63□□□□□ -0.23
ACTN4-211ENST00000589528 CDH13P55290 713 aa13.63□□□□□ -0.23
ACTN4-211ENST00000589528 PSG6Q00889 435 aa13.63□□□□□ -0.23
ACTN4-211ENST00000589528 ACSM2AQ08AH3 577 aa13.63□□□□□ -0.23
ACTN4-211ENST00000589528 FAPQ12884 760 aa13.63□□□□□ -0.23
ACTN4-211ENST00000589528 TSNAXIP1Q2TAA8 658 aa13.63□□□□□ -0.23
ACTN4-211ENST00000589528 ACSM2BQ68CK6 577 aa13.63□□□□□ -0.23
ACTN4-211ENST00000589528 WDR75Q8IWA0 830 aaKnown RBP13.63□□□□□ -0.23
ACTN4-211ENST00000589528 PLD6Q8N2A8 252 aaKnown RBP13.63□□□□□ -0.23
ACTN4-211ENST00000589528 CEP112Q8N8E3 955 aa13.63□□□□□ -0.23
ACTN4-211ENST00000589528 STEAP2Q8NFT2 490 aa13.63□□□□□ -0.23
ACTN4-211ENST00000589528 OR10D3Q8NH80 312 aa13.63□□□□□ -0.23
ACTN4-211ENST00000589528 RAB3IL1Q8TBN0 382 aa13.63□□□□□ -0.23
ACTN4-211ENST00000589528 ALG2Q9H553 416 aa13.63□□□□□ -0.23
ACTN4-211ENST00000589528 ESRP2Q9H6T0 727 aaKnown RBP13.63□□□□□ -0.23
ACTN4-211ENST00000589528 SLC35C2Q9NQQ7 365 aa13.63□□□□□ -0.23
ACTN4-211ENST00000589528 FLRT3Q9NZU0 649 aa13.63□□□□□ -0.23
ACTN4-211ENST00000589528 LIPT1Q9Y234 373 aa13.63□□□□□ -0.23
ACTN4-211ENST00000589528 SNX8Q9Y5X2 465 aa13.63□□□□□ -0.23
ACTN4-211ENST00000589528 HMX2A2RU54 273 aa13.62□□□□□ -0.23
ACTN4-211ENST00000589528 A8MV72 311 aaPredicted RBP13.62□□□□□ -0.23
ACTN4-211ENST00000589528 NDUFB5O43674 189 aa13.62□□□□□ -0.23
ACTN4-211ENST00000589528 OR4F21O95013 312 aa13.62□□□□□ -0.23
ACTN4-211ENST00000589528 TUBBP07437 444 aa13.62□□□□□ -0.23
ACTN4-211ENST00000589528 SOD3P08294 240 aa13.62□□□□□ -0.23
ACTN4-211ENST00000589528 PSMB1P20618 241 aaKnown RBP13.62□□□□□ -0.23
ACTN4-211ENST00000589528 IL11P20809 199 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms