RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 CA13Q8N1Q1 262 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 ZNF619Q8N2I2 560 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 C19orf47Q8N9M1 422 aaKnown RBP9.29□□□□□ -0.92
VPS25-202ENST00000589219 CDRT4Q8N9R6 151 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 B3GNT7Q8NFL0 401 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 OR52P1PQ8NH57 321 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 PIGXQ8TBF5 258 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 TEX47Q8TBZ9 253 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 FNDC8Q8TC99 324 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 DYNC2LI1Q8TCX1 351 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 ZDHHC1Q8WTX9 485 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 DIO2Q92813 273 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 KLHDC7BQ96G42 594 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 SCNM1Q9BWG6 230 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 RSPO3Q9BXY4 272 aaPredicted RBP9.29□□□□□ -0.92
VPS25-202ENST00000589219 ZNF350Q9GZX5 532 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 TCEAL2Q9H3H9 227 aaPredicted RBP9.29□□□□□ -0.92
VPS25-202ENST00000589219 PIGUQ9H490 435 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 MTHFD2LQ9H903 347 aaPredicted RBP9.29□□□□□ -0.92
VPS25-202ENST00000589219 IL21RQ9HBE5 538 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 FSCN3Q9NQT6 498 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 POLE3Q9NRF9 147 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 DUSP22Q9NRW4 184 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 GPR83Q9NYM4 423 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 ZNF232Q9UNY5 417 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 WASF3Q9UPY6 502 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 RPL36Q9Y3U8 105 aaKnown RBP9.29□□□□□ -0.92
VPS25-202ENST00000589219 WDR45Q9Y484 360 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 LOC105369274A0A096LPK9 316 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 LOC102723532A0A0G2JNH3 316 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 SPAARA0A1B0GVQ0 90 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 LILRA5A6NI73 299 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 SNTNA6NMZ2 147 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 METTL12A8MUP2 240 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 EFCAB9A8MZ26 197 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 CLDN25C9JDP6 229 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 M0R082 166 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 SNPHO15079 494 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 BCAT2O15382 392 aaPredicted RBP9.28□□□□□ -0.92
VPS25-202ENST00000589219 AIREO43918 545 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 KIAA0513O60268 411 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 CYP7B1O75881 506 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 UBXN7O94888 489 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 SOX14O95416 240 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 ZBTB11O95625 1053 aaPredicted RBP9.28□□□□□ -0.92
VPS25-202ENST00000589219 GPR75O95800 540 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 PTHP01270 115 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 TP53P04637 393 aaPredicted RBP9.28□□□□□ -0.92
VPS25-202ENST00000589219 RPLP0P05388 317 aaKnown RBP9.28□□□□□ -0.92
VPS25-202ENST00000589219 DBIP07108 87 aaKnown RBP9.28□□□□□ -0.92
VPS25-202ENST00000589219 CELA2BP08218 269 aaPredicted RBP9.28□□□□□ -0.92
VPS25-202ENST00000589219 GUSBP08236 651 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 STSP08842 583 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 CD59P13987 128 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 ZNF12P17014 697 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 FUT4P22083 530 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 MMP11P24347 488 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 MAOBP27338 520 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 C21orf33P30042 268 aaPredicted RBP9.28□□□□□ -0.92
VPS25-202ENST00000589219 LSSP48449 732 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 PCYT1AP49585 367 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 CLK1P49759 484 aaKnown RBP9.28□□□□□ -0.92
VPS25-202ENST00000589219 RHAGQ02094 409 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 ZNF91Q05481 1191 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 TSPAN31Q12999 210 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 DUSP8Q13202 625 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 ELOCQ15369 112 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 DECR1Q16698 335 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 TMEM236Q5W0B7 351 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 PLAG1Q6DJT9 500 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 TYW3Q6IPR3 259 aaKnown RBP9.28□□□□□ -0.92
VPS25-202ENST00000589219 RASSF6Q6ZTQ3 369 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 RANBP3LQ86VV4 465 aaPredicted RBP9.28□□□□□ -0.92
VPS25-202ENST00000589219 VRK2Q86Y07 508 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 OR4N4Q8N0Y3 316 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 FAM26EQ8N5C1 309 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 KDF1Q8NAX2 398 aaPredicted RBP9.28□□□□□ -0.92
VPS25-202ENST00000589219 NDNFQ8TB73 568 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 PATE1Q8WXA2 126 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 ACOT11Q8WXI4 607 aaPredicted RBP9.28□□□□□ -0.92
VPS25-202ENST00000589219 CDS1Q92903 461 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 ZHX1-C8orf76Q96EF9 292 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 SLC35A4Q96G79 324 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 SLC6A18Q96N87 628 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 WFDC6Q9BQY6 131 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 LRRC61Q9BV99 259 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 TEX12Q9BXU0 123 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 MIR1-1HGQ9H1L0 117 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 ARMC7Q9H6L4 198 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 FBXO8Q9NRD0 319 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 SELENONQ9NZV5 590 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 CCDC59Q9P031 241 aaKnown RBP9.28□□□□□ -0.92
VPS25-202ENST00000589219 MKLN1Q9UL63 735 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 KCNE3Q9Y6H6 103 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 A3GALT2U3KPV4 340 aa9.28□□□□□ -0.92
VPS25-202ENST00000589219 NUP214P35658 2090 aaPredicted RBP9.27□□□□□ -0.93
VPS25-202ENST00000589219 A0A1B0GVG6 124 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 HYKKA2RU49 373 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 ZNF860A6NHJ4 632 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 C1QTNF9BB2RNN3 333 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms