RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 OR4D11Q8NGI4 311 aa6.93□□□□□ -1.3
ZNF540-206ENST00000589117 OR52P1PQ8NH57 321 aa6.93□□□□□ -1.3
ZNF540-206ENST00000589117 NT5CQ8TCD5 201 aa6.93□□□□□ -1.3
ZNF540-206ENST00000589117 ZFPM2Q8WW38 1151 aa6.93□□□□□ -1.3
ZNF540-206ENST00000589117 ACOT11Q8WXI4 607 aaPredicted RBP6.93□□□□□ -1.3
ZNF540-206ENST00000589117 ITFG2Q969R8 447 aa6.93□□□□□ -1.3
ZNF540-206ENST00000589117 ZNF582Q96NG8 517 aaPredicted RBP6.93□□□□□ -1.3
ZNF540-206ENST00000589117 MS4A4EQ96PG1 132 aa6.93□□□□□ -1.3
ZNF540-206ENST00000589117 SERINC2Q96SA4 455 aa6.93□□□□□ -1.3
ZNF540-206ENST00000589117 NRTNQ99748 197 aa6.93□□□□□ -1.3
ZNF540-206ENST00000589117 COQ7Q99807 217 aa6.93□□□□□ -1.3
ZNF540-206ENST00000589117 KXD1Q9BQD3 176 aa6.93□□□□□ -1.3
ZNF540-206ENST00000589117 KLHL25Q9H0H3 589 aa6.93□□□□□ -1.3
ZNF540-206ENST00000589117 HHATLQ9HCP6 504 aa6.93□□□□□ -1.3
ZNF540-206ENST00000589117 EQTNQ9NQ60 294 aa6.93□□□□□ -1.3
ZNF540-206ENST00000589117 MRPS18AQ9NVS2 196 aaKnown RBP6.93□□□□□ -1.3
ZNF540-206ENST00000589117 TAS2R16Q9NYV7 291 aa6.93□□□□□ -1.3
ZNF540-206ENST00000589117 PTGFRNQ9P2B2 879 aa6.93□□□□□ -1.3
ZNF540-206ENST00000589117 MYO7AQ13402 2215 aa6.93□□□□□ -1.3
ZNF540-206ENST00000589117 KIF26AQ9ULI4 1882 aaPredicted RBP6.92□□□□□ -1.3
ZNF540-206ENST00000589117 A0A087WUU8 490 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 TMEM129A0AVI4 362 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 PRKYO43930 277 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 GPX5O75715 221 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 APBB3O95704 486 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 LAMP2P13473 410 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 CPEP16870 476 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 GRK5P34947 590 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 ATP6V1E1P36543 226 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 SOX3P41225 446 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 KIR2DL1P43626 348 aaPredicted RBP6.92□□□□□ -1.3
ZNF540-206ENST00000589117 BNC1Q01954 994 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 POU4F3Q15319 338 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 SSX1Q16384 188 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 PLEKHM3Q6ZWE6 761 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 CCDC190Q86UF4 302 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 RANBP3LQ86VV4 465 aaPredicted RBP6.92□□□□□ -1.3
ZNF540-206ENST00000589117 SNX29P2Q8IUI4 249 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 TRIM48Q8IWZ4 208 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 PHC2Q8IXK0 858 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 CDK20Q8IZL9 346 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 OR8H2Q8N162 312 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 FBXL6Q8N531 539 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 CLDN22Q8N7P3 220 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 OR52I1Q8NGK6 324 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 OR9A2Q8NGT5 310 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 SLC9A6Q92581 669 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 HTRA1Q92743 480 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 RERGQ96A58 199 aaPredicted RBP6.92□□□□□ -1.3
ZNF540-206ENST00000589117 SIPA1Q96FS4 1042 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 KCTD7Q96MP8 289 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 WDR92Q96MX6 357 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 ARHGDIGQ99819 225 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 KCNS3Q9BQ31 491 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 MACROD1Q9BQ69 325 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 PLA2G2FQ9BZM2 168 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 MKRN2Q9H000 416 aaKnown RBP6.92□□□□□ -1.3
ZNF540-206ENST00000589117 SLC38A1Q9H2H9 487 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 FGF20Q9NP95 211 aaPredicted RBP6.92□□□□□ -1.3
ZNF540-206ENST00000589117 SPHK1Q9NYA1 384 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 NTMQ9P121 344 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 TESQ9UGI8 421 aaKnown RBP6.92□□□□□ -1.3
ZNF540-206ENST00000589117 PCOLCE2Q9UKZ9 415 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 TRAPPC4Q9Y296 219 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 HIF3AQ9Y2N7 669 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 LSM2Q9Y333 95 aaKnown RBP6.92□□□□□ -1.3
ZNF540-206ENST00000589117 WDR45Q9Y484 360 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 MYO10Q9HD67 2058 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 KIAA0100Q14667 2235 aaKnown RBP6.92□□□□□ -1.3
ZNF540-206ENST00000589117 CCDC88CQ9P219 2028 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 LAMA2P24043 3122 aaKnown RBP6.92□□□□□ -1.3
ZNF540-206ENST00000589117 TRAV20A0A0B4J274 112 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 GRXCR1A8MXD5 290 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 K7EQS6 105 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 TM4SF5O14894 197 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 OR5F1O95221 314 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 RASGRP1O95267 797 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 HOXB2P14652 356 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 FUT4P22083 530 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 FPR3P25089 353 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 NTF4P34130 210 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 RPS19P39019 145 aaKnown RBP6.92□□□□□ -1.3
ZNF540-206ENST00000589117 CRYBB2P43320 205 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 AVPR1BP47901 424 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 TNFRSF17Q02223 184 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 CHRNEQ04844 493 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 SLC13A2Q13183 592 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 PLK5Q496M5 336 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 MINDY4Q4G0A6 757 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 MANEAQ5SRI9 462 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 LIPKQ5VXJ0 399 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 CDC73Q6P1J9 531 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 HSDL2Q6YN16 418 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 TMEM184AQ6ZMB5 413 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 AKAP14Q86UN6 197 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 PAQR7Q86WK9 346 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 FAM20CQ8IXL6 584 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 IQCF1Q8N6M8 205 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 UFD1Q92890 307 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 UCN3Q969E3 161 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms