RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 TIA1P31483 386 aaKnown RBP eCLIP12.58□□□□□ -0.4
VMP1-209ENST00000588915 ETF1P62495 437 aaKnown RBP12.58□□□□□ -0.4
VMP1-209ENST00000588915 SIRPAP78324 504 aa12.58□□□□□ -0.4
VMP1-209ENST00000588915 PPP2R2BQ00005 443 aa12.58□□□□□ -0.4
VMP1-209ENST00000588915 SLC7A5Q01650 507 aa12.58□□□□□ -0.4
VMP1-209ENST00000588915 C17orf67Q0P5P2 114 aa12.58□□□□□ -0.4
VMP1-209ENST00000588915 PON3Q15166 354 aa12.58□□□□□ -0.4
VMP1-209ENST00000588915 ZNF678Q5SXM1 525 aa12.58□□□□□ -0.4
VMP1-209ENST00000588915 LGSNQ5TDP6 509 aa12.58□□□□□ -0.4
VMP1-209ENST00000588915 C8orf74Q6P047 294 aa12.58□□□□□ -0.4
VMP1-209ENST00000588915 ZNF550Q7Z398 422 aa12.58□□□□□ -0.4
VMP1-209ENST00000588915 FNDC9Q8TBE3 224 aa12.58□□□□□ -0.4
VMP1-209ENST00000588915 DUSP19Q8WTR2 217 aa12.58□□□□□ -0.4
VMP1-209ENST00000588915 C1GALT1C1Q96EU7 318 aa12.58□□□□□ -0.4
VMP1-209ENST00000588915 PERPQ96FX8 193 aa12.58□□□□□ -0.4
VMP1-209ENST00000588915 ACPTQ9BZG2 426 aa12.58□□□□□ -0.4
VMP1-209ENST00000588915 OR10A4Q9H209 315 aa12.58□□□□□ -0.4
VMP1-209ENST00000588915 CDC42EP4Q9H3Q1 356 aaKnown RBP12.58□□□□□ -0.4
VMP1-209ENST00000588915 C3orf14Q9HBI5 128 aa12.58□□□□□ -0.4
VMP1-209ENST00000588915 Q9N2J8 555 aa12.58□□□□□ -0.4
VMP1-209ENST00000588915 ZNF701Q9NV72 531 aaPredicted RBP12.58□□□□□ -0.4
VMP1-209ENST00000588915 PAQR5Q9NXK6 330 aaPredicted RBP12.58□□□□□ -0.4
VMP1-209ENST00000588915 MED11Q9P086 117 aa12.58□□□□□ -0.4
VMP1-209ENST00000588915 RAI1Q7Z5J4 1906 aaPredicted RBP12.57□□□□□ -0.4
VMP1-209ENST00000588915 TRIM49D1C9J1S8 452 aa12.57□□□□□ -0.4
VMP1-209ENST00000588915 H0YC42 278 aa12.57□□□□□ -0.4
VMP1-209ENST00000588915 SEC14L5O43304 696 aa12.57□□□□□ -0.4
VMP1-209ENST00000588915 NME6O75414 186 aaPredicted RBP12.57□□□□□ -0.4
VMP1-209ENST00000588915 PSMG1O95456 288 aa12.57□□□□□ -0.4
VMP1-209ENST00000588915 CNOT4O95628 575 aaKnown RBP12.57□□□□□ -0.4
VMP1-209ENST00000588915 IL33O95760 270 aa12.57□□□□□ -0.4
VMP1-209ENST00000588915 ENO1P06733 434 aaKnown RBP12.57□□□□□ -0.4
VMP1-209ENST00000588915 ANXA4P09525 319 aaPredicted RBP12.57□□□□□ -0.4
VMP1-209ENST00000588915 CHN1P15882 459 aa12.57□□□□□ -0.4
VMP1-209ENST00000588915 TCEA1P23193 301 aaKnown RBP12.57□□□□□ -0.4
VMP1-209ENST00000588915 PTH2RP49190 550 aa12.57□□□□□ -0.4
VMP1-209ENST00000588915 NR1H2P55055 460 aa12.57□□□□□ -0.4
VMP1-209ENST00000588915 TPD52P55327 224 aaPredicted RBP12.57□□□□□ -0.4
VMP1-209ENST00000588915 PKNOX1P55347 436 aa12.57□□□□□ -0.4
VMP1-209ENST00000588915 CLDN20P56880 219 aa12.57□□□□□ -0.4
VMP1-209ENST00000588915 ZNF155Q12901 538 aaPredicted RBP12.57□□□□□ -0.4
VMP1-209ENST00000588915 ZNHIT3Q15649 155 aaPredicted RBP12.57□□□□□ -0.4
VMP1-209ENST00000588915 SGCBQ16585 318 aa12.57□□□□□ -0.4
VMP1-209ENST00000588915 TMEM44Q2T9K0 475 aa12.57□□□□□ -0.4
VMP1-209ENST00000588915 UNC50Q53HI1 259 aa12.57□□□□□ -0.4
VMP1-209ENST00000588915 TCHHL1Q5QJ38 904 aaPredicted RBP12.57□□□□□ -0.4
VMP1-209ENST00000588915 TIFABQ6ZNK6 161 aa12.57□□□□□ -0.4
VMP1-209ENST00000588915 GPRIN3Q6ZVF9 776 aa12.57□□□□□ -0.4
VMP1-209ENST00000588915 SLC22A9Q8IVM8 553 aa12.57□□□□□ -0.4
VMP1-209ENST00000588915 OR6K3Q8NGY3 331 aa12.57□□□□□ -0.4
VMP1-209ENST00000588915 SPATA3Q8NHX4 192 aa12.57□□□□□ -0.4
VMP1-209ENST00000588915 DCAKDQ8WVC6 231 aa12.57□□□□□ -0.4
VMP1-209ENST00000588915 TMEM171Q8WVE6 324 aa12.57□□□□□ -0.4
VMP1-209ENST00000588915 ANP32BQ92688 251 aaKnown RBP12.57□□□□□ -0.4
VMP1-209ENST00000588915 APIPQ96GX9 242 aa12.57□□□□□ -0.4
VMP1-209ENST00000588915 GMPPAQ96IJ6 420 aaPredicted RBP12.57□□□□□ -0.4
VMP1-209ENST00000588915 HS3ST6Q96QI5 342 aa12.57□□□□□ -0.4
VMP1-209ENST00000588915 LMF2Q9BU23 707 aaKnown RBP12.57□□□□□ -0.4
VMP1-209ENST00000588915 KLHL4Q9C0H6 718 aa12.57□□□□□ -0.4
VMP1-209ENST00000588915 GLRX2Q9NS18 164 aa12.57□□□□□ -0.4
VMP1-209ENST00000588915 EMC9Q9Y3B6 208 aa12.57□□□□□ -0.4
VMP1-209ENST00000588915 TRIM64A6NGJ6 449 aa12.56□□□□□ -0.4
VMP1-209ENST00000588915 TRIM64BA6NI03 449 aa12.56□□□□□ -0.4
VMP1-209ENST00000588915 C17orf51A8MQB3 221 aa12.56□□□□□ -0.4
VMP1-209ENST00000588915 POC1B-GALNT4F8VUJ3 575 aa12.56□□□□□ -0.4
VMP1-209ENST00000588915 H3BML4 177 aa12.56□□□□□ -0.4
VMP1-209ENST00000588915 SMAD7O15105 426 aaKnown RBP12.56□□□□□ -0.4
VMP1-209ENST00000588915 KLF4O43474 513 aa12.56□□□□□ -0.4
VMP1-209ENST00000588915 ZNF17P17021 662 aa12.56□□□□□ -0.4
VMP1-209ENST00000588915 PCSK6P29122 969 aa12.56□□□□□ -0.4
VMP1-209ENST00000588915 PRR5P85299 388 aa12.56□□□□□ -0.4
VMP1-209ENST00000588915 CKAP4Q07065 602 aaKnown RBP12.56□□□□□ -0.4
VMP1-209ENST00000588915 ZNF763Q0D2J5 394 aa12.56□□□□□ -0.4
VMP1-209ENST00000588915 C2orf80Q0P641 193 aa12.56□□□□□ -0.4
VMP1-209ENST00000588915 LCP2Q13094 533 aa12.56□□□□□ -0.4
VMP1-209ENST00000588915 SH2D4BQ5SQS7 431 aa12.56□□□□□ -0.4
VMP1-209ENST00000588915 TEX35Q5T0J7 233 aa12.56□□□□□ -0.4
VMP1-209ENST00000588915 C22orf34Q6ZV56 151 aa12.56□□□□□ -0.4
VMP1-209ENST00000588915 CNPY4Q8N129 248 aa12.56□□□□□ -0.4
VMP1-209ENST00000588915 OR2L13Q8N349 312 aa12.56□□□□□ -0.4
VMP1-209ENST00000588915 ZNF611Q8N823 705 aa12.56□□□□□ -0.4
VMP1-209ENST00000588915 FAM76AQ8TAV0 307 aa12.56□□□□□ -0.4
VMP1-209ENST00000588915 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.56□□□□□ -0.4
VMP1-209ENST00000588915 ZC3HAV1LQ96H79 300 aaKnown RBP12.56□□□□□ -0.4
VMP1-209ENST00000588915 MDFIQ99750 246 aa12.56□□□□□ -0.4
VMP1-209ENST00000588915 CXorf56Q9H5V9 222 aa12.56□□□□□ -0.4
VMP1-209ENST00000588915 DMGDHQ9UI17 866 aaKnown RBP12.56□□□□□ -0.4
VMP1-209ENST00000588915 ROS1P08922 2347 aa12.56□□□□□ -0.4
VMP1-209ENST00000588915 FBN3Q75N90 2809 aa12.55□□□□□ -0.4
VMP1-209ENST00000588915 ZANQ9Y493 2812 aa12.55□□□□□ -0.4
VMP1-209ENST00000588915 A0A087WZY1 265 aa12.55□□□□□ -0.4
VMP1-209ENST00000588915 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.55□□□□□ -0.4
VMP1-209ENST00000588915 KIAA1324LA8MWY0 1029 aaPredicted RBP12.55□□□□□ -0.4
VMP1-209ENST00000588915 H3BQF6 201 aa12.55□□□□□ -0.4
VMP1-209ENST00000588915 UPK1AO00322 258 aa12.55□□□□□ -0.4
VMP1-209ENST00000588915 DLX3O60479 287 aa12.55□□□□□ -0.4
VMP1-209ENST00000588915 SS18L1O75177 396 aaPredicted RBP12.55□□□□□ -0.4
VMP1-209ENST00000588915 KCNH1O95259 989 aa12.55□□□□□ -0.4
VMP1-209ENST00000588915 JUNP05412 331 aaKnown RBP12.55□□□□□ -0.4
VMP1-209ENST00000588915 THBDP07204 575 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms