RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 TRIB1Q96RU8 372 aa13.12□□□□□ -0.31
DDX39A-208ENST00000588692 GIMAP2Q9UG22 337 aa13.12□□□□□ -0.31
DDX39A-208ENST00000588692 KCNN3Q9UGI6 736 aa13.12□□□□□ -0.31
DDX39A-208ENST00000588692 DOCK7Q96N67 2140 aa13.12□□□□□ -0.31
DDX39A-208ENST00000588692 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.11□□□□□ -0.31
DDX39A-208ENST00000588692 H0Y3Z8 333 aa13.11□□□□□ -0.31
DDX39A-208ENST00000588692 DHRS4L1P0CG22 281 aa13.11□□□□□ -0.31
DDX39A-208ENST00000588692 CAPN3P20807 821 aa13.11□□□□□ -0.31
DDX39A-208ENST00000588692 DPP4P27487 766 aa13.11□□□□□ -0.31
DDX39A-208ENST00000588692 PRKAG1P54619 331 aa13.11□□□□□ -0.31
DDX39A-208ENST00000588692 TLE4Q04727 773 aa13.11□□□□□ -0.31
DDX39A-208ENST00000588692 PTGR1Q14914 329 aa13.11□□□□□ -0.31
DDX39A-208ENST00000588692 CHI3L2Q15782 390 aa13.11□□□□□ -0.31
DDX39A-208ENST00000588692 SMU1Q2TAY7 513 aa13.11□□□□□ -0.31
DDX39A-208ENST00000588692 IL23RQ5VWK5 629 aa13.11□□□□□ -0.31
DDX39A-208ENST00000588692 OR5M10Q6IEU7 315 aa13.11□□□□□ -0.31
DDX39A-208ENST00000588692 MFSD12Q6NUT3 480 aa13.11□□□□□ -0.31
DDX39A-208ENST00000588692 NAXEQ8NCW5 288 aa13.11□□□□□ -0.31
DDX39A-208ENST00000588692 GIMAP5Q96F15 307 aa13.11□□□□□ -0.31
DDX39A-208ENST00000588692 RMND5BQ96G75 393 aaPredicted RBP13.11□□□□□ -0.31
DDX39A-208ENST00000588692 PRPF18Q99633 342 aaKnown RBP13.11□□□□□ -0.31
DDX39A-208ENST00000588692 C1orf50Q9BV19 199 aa13.11□□□□□ -0.31
DDX39A-208ENST00000588692 TBL1XR1Q9BZK7 514 aa13.11□□□□□ -0.31
DDX39A-208ENST00000588692 CENPHQ9H3R5 247 aa13.11□□□□□ -0.31
DDX39A-208ENST00000588692 PTGES2Q9H7Z7 377 aa13.11□□□□□ -0.31
DDX39A-208ENST00000588692 MCCC2Q9HCC0 563 aa13.11□□□□□ -0.31
DDX39A-208ENST00000588692 EIF3LQ9Y262 564 aaKnown RBP13.11□□□□□ -0.31
DDX39A-208ENST00000588692 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.11□□□□□ -0.31
DDX39A-208ENST00000588692 PDZD2O15018 2839 aa13.11□□□□□ -0.31
DDX39A-208ENST00000588692 A0A1W2PRB8 838 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 UTS2O95399 124 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 PRPS1L1P21108 318 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 BMP5P22003 454 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 LCN1P31025 176 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 RFX3P48380 749 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 PRIM2P49643 509 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 LHX2P50458 406 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 ASCL1P50553 236 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 ABCE1P61221 599 aaKnown RBP13.1□□□□□ -0.31
DDX39A-208ENST00000588692 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.1□□□□□ -0.31
DDX39A-208ENST00000588692 FBXL19-AS1Q494R0 122 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 CPTPQ5TA50 214 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 ADGRE4PQ86SQ3 457 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 LURAP1LQ8IV03 231 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 OR2M3Q8NG83 312 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 OR7A2PQ8NGA2 310 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 PIK3R3Q92569 461 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 SLC9A6Q92581 669 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 FAM120BQ96EK7 910 aaKnown RBP13.1□□□□□ -0.31
DDX39A-208ENST00000588692 ZFP3Q96NJ6 502 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 UCN2Q96RP3 112 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 ZCCHC3Q9NUD5 404 aaKnown RBP13.1□□□□□ -0.31
DDX39A-208ENST00000588692 ASIC5Q9NY37 505 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 NOP53Q9NZM5 478 aaKnown RBP13.1□□□□□ -0.31
DDX39A-208ENST00000588692 RAP2CQ9Y3L5 183 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 MED12Q93074 2177 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 KIAA1549Q9HCM3 1950 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 GXYLT2A0PJZ3 443 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 WDR91A4D1P6 747 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 KDM4EB2RXH2 506 aaPredicted RBP13.1□□□□□ -0.31
DDX39A-208ENST00000588692 B4DXG7 233 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 LINC01387J3KSC0 135 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 ZIC3O60481 467 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 IL18BPO95998 194 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 NGFRP08138 427 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 ALOX5P09917 674 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 ACP2P11117 423 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 ZNF708P17019 499 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 OPRM1P35372 400 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 ZNF136P52737 540 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 WNT3P56703 355 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 C21orf58P58505 322 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 EMX2Q04743 252 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 C17orf67Q0P5P2 114 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 BCL2A1Q16548 175 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 LSM12Q3MHD2 195 aaKnown RBP13.1□□□□□ -0.31
DDX39A-208ENST00000588692 EXOSC6Q5RKV6 272 aaKnown RBP13.1□□□□□ -0.31
DDX39A-208ENST00000588692 CES4AQ5XG92 561 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 RIMKLAQ8IXN7 391 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 ZNF781Q8N8C0 355 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 RELL2Q8NC24 303 aaPredicted RBP13.1□□□□□ -0.31
DDX39A-208ENST00000588692 SLC16A11Q8NCK7 471 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 GOT1L1Q8NHS2 421 aaPredicted RBP13.1□□□□□ -0.31
DDX39A-208ENST00000588692 PSMA8Q8TAA3 256 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 OR5P2Q8WZ92 322 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 COQ8BQ96D53 544 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 TM9SF2Q99805 663 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 TUBA1CQ9BQE3 449 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 BHLHE41Q9C0J9 482 aaPredicted RBP13.1□□□□□ -0.31
DDX39A-208ENST00000588692 ACBD3Q9H3P7 528 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 DSN1Q9H410 356 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 NEUROD4Q9HD90 331 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 DUSP22Q9NRW4 184 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 SIRT3Q9NTG7 399 aaPredicted RBP13.1□□□□□ -0.31
DDX39A-208ENST00000588692 GIN1Q9NXP7 522 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 FLRT3Q9NZU0 649 aa13.1□□□□□ -0.31
DDX39A-208ENST00000588692 FOXD3Q9UJU5 478 aaPredicted RBP13.1□□□□□ -0.31
DDX39A-208ENST00000588692 ANKHD1Q8IWZ3 2542 aaKnown RBP13.09□□□□□ -0.31
DDX39A-208ENST00000588692 IGLV3-32A0A0A0MS00 114 aa13.09□□□□□ -0.31
DDX39A-208ENST00000588692 SYT5O00445 386 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms