RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 RNF138Q8WVD3 245 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 EFHD2Q96C19 240 aaPredicted RBP8.32□□□□□ -1.08
CIRBP-218ENST00000588344 TMEM41AQ96HV5 264 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 FRMD6Q96NE9 622 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 DOHHQ9BU89 302 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 TBL1XR1Q9BZK7 514 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 SAP130Q9H0E3 1048 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 TMEM38AQ9H6F2 299 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 IL1RL2Q9HB29 575 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 CACYBPQ9HB71 228 aaKnown RBP8.32□□□□□ -1.08
CIRBP-218ENST00000588344 ZFP64Q9NPA5 681 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 SLC6A13Q9NSD5 602 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 QPCTLQ9NXS2 382 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 SLC25A37Q9NYZ2 338 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 KLRF1Q9NZS2 232 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 SLAMF8Q9P0V8 285 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 SUCOQ9UBS9 1254 aaKnown RBP8.32□□□□□ -1.08
CIRBP-218ENST00000588344 B4GALT7Q9UBV7 327 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 TAGLN3Q9UI15 199 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 CSAG2Q9Y5P2 127 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.32□□□□□ -1.08
CIRBP-218ENST00000588344 CACNA1BQ00975 2339 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 A0A0G2JPF8 293 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 PRAMEF25A6NGN4 478 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 HNRNPCL2B2RXH8 293 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 HNRNPCL3B7ZW38 293 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 ALG1L2C9J202 215 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 AIM2O14862 343 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 SUV39H1O43463 412 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 FADS1O60427 444 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 HNRNPCL1O60812 293 aaKnown RBP8.31□□□□□ -1.08
CIRBP-218ENST00000588344 DNAJA2O60884 412 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 ICOSLGO75144 302 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 TRIM3O75382 744 aaPredicted RBP8.31□□□□□ -1.08
CIRBP-218ENST00000588344 NME6O75414 186 aaPredicted RBP8.31□□□□□ -1.08
CIRBP-218ENST00000588344 CBR3O75828 277 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 SORBS2O94875 1100 aaKnown RBP8.31□□□□□ -1.08
CIRBP-218ENST00000588344 UTS2O95399 124 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 TFPTP0C1Z6 253 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 HNRNPCL4P0DMR1 293 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 CCL3P10147 92 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 ESRRAP11474 423 aaPredicted RBP8.31□□□□□ -1.08
CIRBP-218ENST00000588344 CYP4B1P13584 511 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 ETFAP13804 333 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 SLC6A2P23975 617 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 MSX1P28360 303 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 ADH7P40394 386 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 RFX3P48380 749 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 MVDP53602 400 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 RPS26P62854 115 aaKnown RBP8.31□□□□□ -1.08
CIRBP-218ENST00000588344 ZNF630Q2M218 657 aaPredicted RBP8.31□□□□□ -1.08
CIRBP-218ENST00000588344 GPAT3Q53EU6 434 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 KLHL26Q53HC5 615 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 SOWAHCQ53LP3 525 aaPredicted RBP8.31□□□□□ -1.08
CIRBP-218ENST00000588344 COX20Q5RI15 118 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.31□□□□□ -1.08
CIRBP-218ENST00000588344 GCNT6Q5T4J0 391 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 TIGD3Q6B0B8 471 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 NANOGP8Q6NSW7 305 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 FAM180AQ6UWF9 173 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 TRPM8Q7Z2W7 1104 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.31□□□□□ -1.08
CIRBP-218ENST00000588344 TREML1Q86YW5 311 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 MSRB3Q8IXL7 192 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 PEX5LQ8IYB4 626 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 FITM2Q8N6M3 262 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 Q8NA96 180 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 OR1J4Q8NGS1 313 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 OR4C3Q8NH37 302 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 FBXO30Q8TB52 745 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 PNPT1Q8TCS8 783 aaKnown RBP8.31□□□□□ -1.08
CIRBP-218ENST00000588344 RAB8BQ92930 207 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 NTNG2Q96CW9 530 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 NSL1Q96IY1 281 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 ZNF597Q96LX8 424 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 NODALQ96S42 347 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 BARD1Q99728 777 aaKnown RBP8.31□□□□□ -1.08
CIRBP-218ENST00000588344 ECSITQ9BQ95 431 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 CPPED1Q9BRF8 314 aaPredicted RBP8.31□□□□□ -1.08
CIRBP-218ENST00000588344 SPATA5L1Q9BVQ7 753 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 OSBPL11Q9BXB4 747 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 ZNF350Q9GZX5 532 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 SERHL2Q9H4I8 314 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 ARMC7Q9H6L4 198 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 KAT8Q9H7Z6 458 aaKnown RBP8.31□□□□□ -1.08
CIRBP-218ENST00000588344 NANOGQ9H9S0 305 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 A4GALTQ9NPC4 353 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 ZNF232Q9UNY5 417 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 WDR45Q9Y484 360 aa8.31□□□□□ -1.08
CIRBP-218ENST00000588344 CCDC88CQ9P219 2028 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 C5orf58C9J3I9 102 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 NDUFB5O43674 189 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 SLC28A2O43868 658 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 TNFRSF21O75509 655 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 SERPINB7O75635 380 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 GLSO94925 669 aaPredicted RBP8.3□□□□□ -1.08
CIRBP-218ENST00000588344 OXSR1O95747 527 aaPredicted RBP8.3□□□□□ -1.08
CIRBP-218ENST00000588344 IGKV1D-16P01601 117 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 ETS2P15036 469 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 CD1EP15812 388 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms