RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 BMP5P22003 454 aa18.18■□□□□ 0.5
TRAPPC6A-203ENST00000587818 GCKP35557 465 aa18.18■□□□□ 0.5
TRAPPC6A-203ENST00000587818 HPCAL1P37235 193 aa18.18■□□□□ 0.5
TRAPPC6A-203ENST00000587818 MAP3K8P41279 467 aa18.18■□□□□ 0.5
TRAPPC6A-203ENST00000587818 GFRA1P56159 465 aa18.18■□□□□ 0.5
TRAPPC6A-203ENST00000587818 PDCD2Q16342 344 aaPredicted RBP18.18■□□□□ 0.5
TRAPPC6A-203ENST00000587818 GRAMD1BQ3KR37 738 aa18.18■□□□□ 0.5
TRAPPC6A-203ENST00000587818 CPTPQ5TA50 214 aa18.18■□□□□ 0.5
TRAPPC6A-203ENST00000587818 NSUN5P2Q63ZY6 315 aa18.18■□□□□ 0.5
TRAPPC6A-203ENST00000587818 FIGNL1Q6PIW4 674 aa18.18■□□□□ 0.5
TRAPPC6A-203ENST00000587818 LRIG3Q6UXM1 1119 aa18.18■□□□□ 0.5
TRAPPC6A-203ENST00000587818 APOOLQ6UXV4 268 aa18.18■□□□□ 0.5
TRAPPC6A-203ENST00000587818 IFNEQ86WN2 208 aa18.18■□□□□ 0.5
TRAPPC6A-203ENST00000587818 LACC1Q8IV20 430 aa18.18■□□□□ 0.5
TRAPPC6A-203ENST00000587818 HOMEZQ8IX15 550 aa18.18■□□□□ 0.5
TRAPPC6A-203ENST00000587818 DMRTC2Q8IXT2 367 aaPredicted RBP18.18■□□□□ 0.5
TRAPPC6A-203ENST00000587818 RELL2Q8NC24 303 aaPredicted RBP18.18■□□□□ 0.5
TRAPPC6A-203ENST00000587818 OR2M3Q8NG83 312 aa18.18■□□□□ 0.5
TRAPPC6A-203ENST00000587818 SFXN2Q96NB2 322 aa18.18■□□□□ 0.5
TRAPPC6A-203ENST00000587818 SSU72Q9NP77 194 aaKnown RBP18.18■□□□□ 0.5
TRAPPC6A-203ENST00000587818 SIRT3Q9NTG7 399 aaPredicted RBP18.18■□□□□ 0.5
TRAPPC6A-203ENST00000587818 MRTO4Q9UKD2 239 aaKnown RBP18.18■□□□□ 0.5
TRAPPC6A-203ENST00000587818 FAM47E-STBD1D6RA91 191 aa18.17■□□□□ 0.5
TRAPPC6A-203ENST00000587818 H0Y3Z8 333 aa18.17■□□□□ 0.5
TRAPPC6A-203ENST00000587818 BIRC5O15392 142 aa18.17■□□□□ 0.5
TRAPPC6A-203ENST00000587818 KCNH1O95259 989 aa18.17■□□□□ 0.5
TRAPPC6A-203ENST00000587818 IL2RAP01589 272 aa18.17■□□□□ 0.5
TRAPPC6A-203ENST00000587818 IFI6P09912 130 aa18.17■□□□□ 0.5
TRAPPC6A-203ENST00000587818 DHRS4L1P0CG22 281 aa18.17■□□□□ 0.5
TRAPPC6A-203ENST00000587818 CPN1P15169 458 aa18.17■□□□□ 0.5
TRAPPC6A-203ENST00000587818 HK1P19367 917 aa18.17■□□□□ 0.5
TRAPPC6A-203ENST00000587818 SSTR2P30874 369 aa18.17■□□□□ 0.5
TRAPPC6A-203ENST00000587818 SLC1A6P48664 564 aa18.17■□□□□ 0.5
TRAPPC6A-203ENST00000587818 ZNF136P52737 540 aa18.17■□□□□ 0.5
TRAPPC6A-203ENST00000587818 DUSP5Q16690 384 aa18.17■□□□□ 0.5
TRAPPC6A-203ENST00000587818 POMZP3Q6PJE2 187 aa18.17■□□□□ 0.5
TRAPPC6A-203ENST00000587818 ENPP6Q6UWR7 440 aa18.17■□□□□ 0.5
TRAPPC6A-203ENST00000587818 ZAR1Q86SH2 424 aa18.17■□□□□ 0.5
TRAPPC6A-203ENST00000587818 ANKRD42Q8N9B4 389 aa18.17■□□□□ 0.5
TRAPPC6A-203ENST00000587818 FADS6Q8N9I5 356 aa18.17■□□□□ 0.5
TRAPPC6A-203ENST00000587818 CDRT4Q8N9R6 151 aa18.17■□□□□ 0.5
TRAPPC6A-203ENST00000587818 C9orf106Q8NAJ2 232 aa18.17■□□□□ 0.5
TRAPPC6A-203ENST00000587818 HOXB13Q92826 284 aaPredicted RBP18.17■□□□□ 0.5
TRAPPC6A-203ENST00000587818 FAM120BQ96EK7 910 aaKnown RBP18.17■□□□□ 0.5
TRAPPC6A-203ENST00000587818 SDHAF3Q9NRP4 125 aa18.17■□□□□ 0.5
TRAPPC6A-203ENST00000587818 NTMQ9P121 344 aa18.17■□□□□ 0.5
TRAPPC6A-203ENST00000587818 EIF3LQ9Y262 564 aaKnown RBP18.17■□□□□ 0.5
TRAPPC6A-203ENST00000587818 SNX8Q9Y5X2 465 aa18.17■□□□□ 0.5
TRAPPC6A-203ENST00000587818 ADGRG4Q8IZF6 3080 aa18.17■□□□□ 0.5
TRAPPC6A-203ENST00000587818 DOCK7Q96N67 2140 aa18.17■□□□□ 0.5
TRAPPC6A-203ENST00000587818 CD8B2A6NJW9 211 aa18.16■□□□□ 0.5
TRAPPC6A-203ENST00000587818 TM9SF1O15321 606 aa18.16■□□□□ 0.5
TRAPPC6A-203ENST00000587818 C6orf47O95873 294 aa18.16■□□□□ 0.5
TRAPPC6A-203ENST00000587818 TIMP3P35625 211 aa18.16■□□□□ 0.5
TRAPPC6A-203ENST00000587818 CLK3P49761 638 aaKnown RBP18.16■□□□□ 0.5
TRAPPC6A-203ENST00000587818 LHX2P50458 406 aa18.16■□□□□ 0.5
TRAPPC6A-203ENST00000587818 B3GALT5-AS1P59052 145 aa18.16■□□□□ 0.5
TRAPPC6A-203ENST00000587818 STX3Q13277 289 aa18.16■□□□□ 0.5
TRAPPC6A-203ENST00000587818 RCAN2Q14206 197 aa18.16■□□□□ 0.5
TRAPPC6A-203ENST00000587818 SF3B4Q15427 424 aaKnown RBP eCLIP18.16■□□□□ 0.54e-6■■□□□ 12
TRAPPC6A-203ENST00000587818 PGS1Q32NB8 556 aa18.16■□□□□ 0.5
TRAPPC6A-203ENST00000587818 SLC25A35Q3KQZ1 300 aa18.16■□□□□ 0.5
TRAPPC6A-203ENST00000587818 CCNJQ5T5M9 372 aa18.16■□□□□ 0.5
TRAPPC6A-203ENST00000587818 MFSD12Q6NUT3 480 aa18.16■□□□□ 0.5
TRAPPC6A-203ENST00000587818 OR4C3Q8NH37 302 aa18.16■□□□□ 0.5
TRAPPC6A-203ENST00000587818 ZPLD1Q8TCW7 415 aa18.16■□□□□ 0.5
TRAPPC6A-203ENST00000587818 CHMP6Q96FZ7 201 aa18.16■□□□□ 0.5
TRAPPC6A-203ENST00000587818 SORT1Q99523 831 aa18.16■□□□□ 0.5
TRAPPC6A-203ENST00000587818 AKTIPQ9H8T0 292 aa18.16■□□□□ 0.5
TRAPPC6A-203ENST00000587818 CALHM2Q9HA72 323 aa18.16■□□□□ 0.5
TRAPPC6A-203ENST00000587818 ZCCHC3Q9NUD5 404 aaKnown RBP18.16■□□□□ 0.5
TRAPPC6A-203ENST00000587818 PNPOQ9NVS9 261 aa18.16■□□□□ 0.5
TRAPPC6A-203ENST00000587818 FAM120CQ9NX05 1096 aaKnown RBP18.16■□□□□ 0.5
TRAPPC6A-203ENST00000587818 MRPS18CQ9Y3D5 142 aaKnown RBP18.16■□□□□ 0.5
TRAPPC6A-203ENST00000587818 RAP2CQ9Y3L5 183 aa18.16■□□□□ 0.5
TRAPPC6A-203ENST00000587818 PDZD2O15018 2839 aa18.16■□□□□ 0.5
TRAPPC6A-203ENST00000587818 TTC36A6NLP5 189 aa18.15■□□□□ 0.5
TRAPPC6A-203ENST00000587818 KCNK2O95069 426 aa18.15■□□□□ 0.5
TRAPPC6A-203ENST00000587818 ANGPTL1O95841 491 aa18.15■□□□□ 0.5
TRAPPC6A-203ENST00000587818 ALOX5P09917 674 aa18.15■□□□□ 0.5
TRAPPC6A-203ENST00000587818 UQCRC1P31930 480 aa18.15■□□□□ 0.5
TRAPPC6A-203ENST00000587818 RPL14P50914 215 aaKnown RBP18.15■□□□□ 0.5
TRAPPC6A-203ENST00000587818 PSMD4P55036 377 aaKnown RBP18.15■□□□□ 0.5
TRAPPC6A-203ENST00000587818 DSCR4P56555 118 aaPredicted RBP18.15■□□□□ 0.5
TRAPPC6A-203ENST00000587818 EMX2Q04743 252 aa18.15■□□□□ 0.5
TRAPPC6A-203ENST00000587818 FOXF2Q12947 444 aa18.15■□□□□ 0.5
TRAPPC6A-203ENST00000587818 RIMKLAQ8IXN7 391 aa18.15■□□□□ 0.5
TRAPPC6A-203ENST00000587818 GATSQ8NAP1 163 aa18.15■□□□□ 0.5
TRAPPC6A-203ENST00000587818 FAM110BQ8TC76 370 aa18.15■□□□□ 0.5
TRAPPC6A-203ENST00000587818 OR5P2Q8WZ92 322 aa18.15■□□□□ 0.5
TRAPPC6A-203ENST00000587818 JADE3Q92613 823 aa18.15■□□□□ 0.5
TRAPPC6A-203ENST00000587818 COQ8BQ96D53 544 aa18.15■□□□□ 0.5
TRAPPC6A-203ENST00000587818 C14orf79Q96F83 325 aa18.15■□□□□ 0.5
TRAPPC6A-203ENST00000587818 G6PC3Q9BUM1 346 aa18.15■□□□□ 0.5
TRAPPC6A-203ENST00000587818 TBL1XR1Q9BZK7 514 aa18.15■□□□□ 0.5
TRAPPC6A-203ENST00000587818 CXorf36Q9H7Y0 433 aa18.15■□□□□ 0.5
TRAPPC6A-203ENST00000587818 ABCG2Q9UNQ0 655 aa18.15■□□□□ 0.5
TRAPPC6A-203ENST00000587818 CLCA1A8K7I4 914 aa18.14■□□□□ 0.49
TRAPPC6A-203ENST00000587818 DVL2O14641 736 aa18.14■□□□□ 0.49
TRAPPC6A-203ENST00000587818 ZWINTO95229 277 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms