RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 C10orf107Q8IVU9 208 aa16.96■□□□□ 0.31
TRIM47-205ENST00000587774 EIF1ADQ8N9N8 165 aaKnown RBP16.96■□□□□ 0.31
TRIM47-205ENST00000587774 OR5M1Q8NGP8 315 aa16.96■□□□□ 0.31
TRIM47-205ENST00000587774 OR2T11Q8NH01 316 aa16.96■□□□□ 0.31
TRIM47-205ENST00000587774 CIDECQ96AQ7 238 aaPredicted RBP16.96■□□□□ 0.31
TRIM47-205ENST00000587774 METTL2AQ96IZ6 378 aaKnown RBP16.96■□□□□ 0.31
TRIM47-205ENST00000587774 ALPK1Q96QP1 1244 aa16.96■□□□□ 0.31
TRIM47-205ENST00000587774 YIPF4Q9BSR8 244 aa16.96■□□□□ 0.31
TRIM47-205ENST00000587774 PPCSQ9HAB8 311 aa16.96■□□□□ 0.31
TRIM47-205ENST00000587774 LRTM1Q9HBL6 345 aa16.96■□□□□ 0.31
TRIM47-205ENST00000587774 EQTNQ9NQ60 294 aa16.96■□□□□ 0.31
TRIM47-205ENST00000587774 C1orf109Q9NX04 203 aa16.96■□□□□ 0.31
TRIM47-205ENST00000587774 EDARQ9UNE0 448 aa16.96■□□□□ 0.31
TRIM47-205ENST00000587774 FIS1Q9Y3D6 152 aa16.96■□□□□ 0.31
TRIM47-205ENST00000587774 NSD1Q96L73 2696 aaPredicted RBP16.95■□□□□ 0.3
TRIM47-205ENST00000587774 NAV3Q8IVL0 2385 aa16.95■□□□□ 0.3
TRIM47-205ENST00000587774 GXYLT2A0PJZ3 443 aa16.95■□□□□ 0.3
TRIM47-205ENST00000587774 SLC22A20A6NK97 555 aa16.95■□□□□ 0.3
TRIM47-205ENST00000587774 A8MXE2 369 aa16.95■□□□□ 0.3
TRIM47-205ENST00000587774 H0YC42 278 aa16.95■□□□□ 0.3
TRIM47-205ENST00000587774 H3BML4 177 aa16.95■□□□□ 0.3
TRIM47-205ENST00000587774 PDPK1O15530 556 aa16.95■□□□□ 0.3
TRIM47-205ENST00000587774 DIAPH2O60879 1101 aa16.95■□□□□ 0.3
TRIM47-205ENST00000587774 RAF1P04049 648 aa16.95■□□□□ 0.3
TRIM47-205ENST00000587774 IFI6P09912 130 aa16.95■□□□□ 0.3
TRIM47-205ENST00000587774 PEPDP12955 493 aa16.95■□□□□ 0.3
TRIM47-205ENST00000587774 CD99P14209 185 aa16.95■□□□□ 0.3
TRIM47-205ENST00000587774 SDC1P18827 310 aa16.95■□□□□ 0.3
TRIM47-205ENST00000587774 DIO3P55073 304 aa16.95■□□□□ 0.3
TRIM47-205ENST00000587774 TPD52P55327 224 aaPredicted RBP16.95■□□□□ 0.3
TRIM47-205ENST00000587774 CLDN15P56746 228 aa16.95■□□□□ 0.3
TRIM47-205ENST00000587774 ZNF385BQ569K4 471 aa16.95■□□□□ 0.3
TRIM47-205ENST00000587774 VWA1Q6PCB0 445 aa16.95■□□□□ 0.3
TRIM47-205ENST00000587774 MARCH3Q86UD3 253 aa16.95■□□□□ 0.3
TRIM47-205ENST00000587774 PIK3R3Q92569 461 aa16.95■□□□□ 0.3
TRIM47-205ENST00000587774 MBD6Q96DN6 1003 aa16.95■□□□□ 0.3
TRIM47-205ENST00000587774 C1GALT1C1Q96EU7 318 aa16.95■□□□□ 0.3
TRIM47-205ENST00000587774 FCRL1Q96LA6 429 aa16.95■□□□□ 0.3
TRIM47-205ENST00000587774 DACH2Q96NX9 599 aa16.95■□□□□ 0.3
TRIM47-205ENST00000587774 CCT7Q99832 543 aa16.95■□□□□ 0.3
TRIM47-205ENST00000587774 TUBB1Q9H4B7 451 aa16.95■□□□□ 0.3
TRIM47-205ENST00000587774 PLEKHF2Q9H8W4 249 aa16.95■□□□□ 0.3
TRIM47-205ENST00000587774 SDHAF3Q9NRP4 125 aa16.95■□□□□ 0.3
TRIM47-205ENST00000587774 MRTO4Q9UKD2 239 aaKnown RBP16.95■□□□□ 0.3
TRIM47-205ENST00000587774 OR2M5A3KFT3 312 aa16.94■□□□□ 0.3
TRIM47-205ENST00000587774 SLC28A1O00337 649 aa16.94■□□□□ 0.3
TRIM47-205ENST00000587774 AZIN1O14977 448 aa16.94■□□□□ 0.3
TRIM47-205ENST00000587774 SEC14L5O43304 696 aa16.94■□□□□ 0.3
TRIM47-205ENST00000587774 RGS14O43566 566 aa16.94■□□□□ 0.3
TRIM47-205ENST00000587774 GOSR1O95249 250 aa16.94■□□□□ 0.3
TRIM47-205ENST00000587774 ATE1O95260 518 aa16.94■□□□□ 0.3
TRIM47-205ENST00000587774 IGKV1D-16P01601 117 aa16.94■□□□□ 0.3
TRIM47-205ENST00000587774 HRGP04196 525 aa16.94■□□□□ 0.3
TRIM47-205ENST00000587774 KLK2P20151 261 aa16.94■□□□□ 0.3
TRIM47-205ENST00000587774 GABRA3P34903 492 aa16.94■□□□□ 0.3
TRIM47-205ENST00000587774 GPC1P35052 558 aa16.94■□□□□ 0.3
TRIM47-205ENST00000587774 SUCLG1P53597 346 aaKnown RBP16.94■□□□□ 0.3
TRIM47-205ENST00000587774 PSMD4P55036 377 aaKnown RBP16.94■□□□□ 0.3
TRIM47-205ENST00000587774 RPL38P63173 70 aaKnown RBP16.94■□□□□ 0.3
TRIM47-205ENST00000587774 Q6ZSR9 355 aa16.94■□□□□ 0.3
TRIM47-205ENST00000587774 CHMP1BQ7LBR1 199 aa16.94■□□□□ 0.3
TRIM47-205ENST00000587774 MEIOBQ8N635 442 aa16.94■□□□□ 0.3
TRIM47-205ENST00000587774 CNEP1R1Q8N9A8 125 aa16.94■□□□□ 0.3
TRIM47-205ENST00000587774 DUSP19Q8WTR2 217 aa16.94■□□□□ 0.3
TRIM47-205ENST00000587774 ZNF764Q96H86 408 aaPredicted RBP16.94■□□□□ 0.3
TRIM47-205ENST00000587774 TSSK3Q96PN8 268 aa16.94■□□□□ 0.3
TRIM47-205ENST00000587774 GATA5Q9BWX5 397 aaPredicted RBP16.94■□□□□ 0.3
TRIM47-205ENST00000587774 TBL1XR1Q9BZK7 514 aa16.94■□□□□ 0.3
TRIM47-205ENST00000587774 PTGES2Q9H7Z7 377 aa16.94■□□□□ 0.3
TRIM47-205ENST00000587774 ZNF337Q9Y3M9 751 aa16.94■□□□□ 0.3
TRIM47-205ENST00000587774 A0A1W2PPR1 153 aa16.93■□□□□ 0.3
TRIM47-205ENST00000587774 MSTNO14793 375 aa16.93■□□□□ 0.3
TRIM47-205ENST00000587774 AKAP10O43572 662 aa16.93■□□□□ 0.3
TRIM47-205ENST00000587774 GMFGO60234 142 aa16.93■□□□□ 0.3
TRIM47-205ENST00000587774 SMNDC1O75940 238 aaKnown RBP eCLIP16.93■□□□□ 0.3
TRIM47-205ENST00000587774 KCNH1O95259 989 aa16.93■□□□□ 0.3
TRIM47-205ENST00000587774 UTS2O95399 124 aa16.93■□□□□ 0.3
TRIM47-205ENST00000587774 NEFHP12036 1026 aa16.93■□□□□ 0.3
TRIM47-205ENST00000587774 MAP3K8P41279 467 aa16.93■□□□□ 0.3
TRIM47-205ENST00000587774 CLK3P49761 638 aaKnown RBP16.93■□□□□ 0.3
TRIM47-205ENST00000587774 CLDN20P56880 219 aa16.93■□□□□ 0.3
TRIM47-205ENST00000587774 PPP2R2AP63151 447 aa16.93■□□□□ 0.3
TRIM47-205ENST00000587774 EEF1A1P68104 462 aaKnown RBP16.93■□□□□ 0.3
TRIM47-205ENST00000587774 SLC18A2Q05940 514 aa16.93■□□□□ 0.3
TRIM47-205ENST00000587774 FOXD4Q12950 439 aaPredicted RBP16.93■□□□□ 0.3
TRIM47-205ENST00000587774 GRAMD1BQ3KR37 738 aa16.93■□□□□ 0.3
TRIM47-205ENST00000587774 EEF1A1P5Q5VTE0 462 aa16.93■□□□□ 0.3
TRIM47-205ENST00000587774 KANK2Q63ZY3 851 aa16.93■□□□□ 0.3
TRIM47-205ENST00000587774 OR2A2Q6IF42 318 aa16.93■□□□□ 0.3
TRIM47-205ENST00000587774 APOOLQ6UXV4 268 aa16.93■□□□□ 0.3
TRIM47-205ENST00000587774 RNF165Q6ZSG1 346 aa16.93■□□□□ 0.3
TRIM47-205ENST00000587774 CAMKMTQ7Z624 323 aa16.93■□□□□ 0.3
TRIM47-205ENST00000587774 CLHC1Q8NHS4 586 aa16.93■□□□□ 0.3
TRIM47-205ENST00000587774 FBXO30Q8TB52 745 aa16.93■□□□□ 0.3
TRIM47-205ENST00000587774 FIG4Q92562 907 aa16.93■□□□□ 0.3
TRIM47-205ENST00000587774 HOXB13Q92826 284 aaPredicted RBP16.93■□□□□ 0.3
TRIM47-205ENST00000587774 PPCDCQ96CD2 204 aa16.93■□□□□ 0.3
TRIM47-205ENST00000587774 STARD4Q96DR4 205 aa16.93■□□□□ 0.3
TRIM47-205ENST00000587774 PINK1Q9BXM7 581 aa16.93■□□□□ 0.3
TRIM47-205ENST00000587774 REEP4Q9H6H4 257 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms