RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 RPS3AP61247 264 aaKnown RBP12.64□□□□□ -0.39
DNMT1-213ENST00000587604 PPP2R2BQ00005 443 aa12.64□□□□□ -0.39
DNMT1-213ENST00000587604 DECR1Q16698 335 aa12.64□□□□□ -0.39
DNMT1-213ENST00000587604 UNC50Q53HI1 259 aa12.64□□□□□ -0.39
DNMT1-213ENST00000587604 SH2D4BQ5SQS7 431 aa12.64□□□□□ -0.39
DNMT1-213ENST00000587604 ZNF678Q5SXM1 525 aa12.64□□□□□ -0.39
DNMT1-213ENST00000587604 ANKRD34AQ69YU3 496 aa12.64□□□□□ -0.39
DNMT1-213ENST00000587604 GALNT18Q6P9A2 607 aa12.64□□□□□ -0.39
DNMT1-213ENST00000587604 GPRIN3Q6ZVF9 776 aa12.64□□□□□ -0.39
DNMT1-213ENST00000587604 PLEKHM3Q6ZWE6 761 aa12.64□□□□□ -0.39
DNMT1-213ENST00000587604 FAM214BQ7L5A3 538 aa12.64□□□□□ -0.39
DNMT1-213ENST00000587604 METTL25Q8N6Q8 603 aa12.64□□□□□ -0.39
DNMT1-213ENST00000587604 OR5M1Q8NGP8 315 aa12.64□□□□□ -0.39
DNMT1-213ENST00000587604 DUSP19Q8WTR2 217 aa12.64□□□□□ -0.39
DNMT1-213ENST00000587604 GFM2Q969S9 779 aaKnown RBP12.64□□□□□ -0.39
DNMT1-213ENST00000587604 C1GALT1C1Q96EU7 318 aa12.64□□□□□ -0.39
DNMT1-213ENST00000587604 C11orf24Q96F05 449 aaPredicted RBP12.64□□□□□ -0.39
DNMT1-213ENST00000587604 BBS4Q96RK4 519 aa12.64□□□□□ -0.39
DNMT1-213ENST00000587604 RTN4RQ9BZR6 473 aa12.64□□□□□ -0.39
DNMT1-213ENST00000587604 KLHL4Q9C0H6 718 aa12.64□□□□□ -0.39
DNMT1-213ENST00000587604 TSPYL1Q9H0U9 437 aa12.64□□□□□ -0.39
DNMT1-213ENST00000587604 CDC42EP4Q9H3Q1 356 aaKnown RBP12.64□□□□□ -0.39
DNMT1-213ENST00000587604 PLSCR4Q9NRQ2 329 aa12.64□□□□□ -0.39
DNMT1-213ENST00000587604 FAM120CQ9NX05 1096 aaKnown RBP12.64□□□□□ -0.39
DNMT1-213ENST00000587604 SIRT5Q9NXA8 310 aa12.64□□□□□ -0.39
DNMT1-213ENST00000587604 DMGDHQ9UI17 866 aaKnown RBP12.64□□□□□ -0.39
DNMT1-213ENST00000587604 ZNF180Q9UJW8 692 aa12.64□□□□□ -0.39
DNMT1-213ENST00000587604 AP4B1Q9Y6B7 739 aa12.64□□□□□ -0.39
DNMT1-213ENST00000587604 ABCA1O95477 2261 aa12.63□□□□□ -0.39
DNMT1-213ENST00000587604 MYO1GB0I1T2 1018 aa12.63□□□□□ -0.39
DNMT1-213ENST00000587604 TRIM49D1C9J1S8 452 aa12.63□□□□□ -0.39
DNMT1-213ENST00000587604 FCGR2AP12318 317 aa12.63□□□□□ -0.39
DNMT1-213ENST00000587604 PPP3CBP16298 524 aa12.63□□□□□ -0.39
DNMT1-213ENST00000587604 TAC1P20366 129 aa12.63□□□□□ -0.39
DNMT1-213ENST00000587604 DDCP20711 480 aa12.63□□□□□ -0.39
DNMT1-213ENST00000587604 HMOX2P30519 316 aa12.63□□□□□ -0.39
DNMT1-213ENST00000587604 TIA1P31483 386 aaKnown RBP eCLIP12.63□□□□□ -0.39
DNMT1-213ENST00000587604 ETF1P62495 437 aaKnown RBP12.63□□□□□ -0.39
DNMT1-213ENST00000587604 ZNF155Q12901 538 aaPredicted RBP12.63□□□□□ -0.39
DNMT1-213ENST00000587604 STX5Q13190 355 aa12.63□□□□□ -0.39
DNMT1-213ENST00000587604 SGCBQ16585 318 aa12.63□□□□□ -0.39
DNMT1-213ENST00000587604 TEX35Q5T0J7 233 aa12.63□□□□□ -0.39
DNMT1-213ENST00000587604 C8orf74Q6P047 294 aa12.63□□□□□ -0.39
DNMT1-213ENST00000587604 SH2D5Q6ZV89 423 aa12.63□□□□□ -0.39
DNMT1-213ENST00000587604 DCAKDQ8WVC6 231 aa12.63□□□□□ -0.39
DNMT1-213ENST00000587604 IGFBPL1Q8WX77 278 aa12.63□□□□□ -0.39
DNMT1-213ENST00000587604 FLRT3Q9NZU0 649 aa12.63□□□□□ -0.39
DNMT1-213ENST00000587604 MRTO4Q9UKD2 239 aaKnown RBP12.63□□□□□ -0.39
DNMT1-213ENST00000587604 GRID1Q9ULK0 1009 aa12.63□□□□□ -0.39
DNMT1-213ENST00000587604 C19orf53Q9UNZ5 99 aaPredicted RBP12.63□□□□□ -0.39
DNMT1-213ENST00000587604 STAB1Q9NY15 2570 aa12.62□□□□□ -0.39
DNMT1-213ENST00000587604 IGLV3-32A0A0A0MS00 114 aa12.62□□□□□ -0.39
DNMT1-213ENST00000587604 INAFM1C9JVW0 142 aa12.62□□□□□ -0.39
DNMT1-213ENST00000587604 POC1B-GALNT4F8VUJ3 575 aa12.62□□□□□ -0.39
DNMT1-213ENST00000587604 KLF4O43474 513 aa12.62□□□□□ -0.39
DNMT1-213ENST00000587604 TMCC2O75069 709 aa12.62□□□□□ -0.39
DNMT1-213ENST00000587604 AQP8O94778 261 aa12.62□□□□□ -0.39
DNMT1-213ENST00000587604 IL33O95760 270 aa12.62□□□□□ -0.39
DNMT1-213ENST00000587604 JUNP05412 331 aaKnown RBP12.62□□□□□ -0.39
DNMT1-213ENST00000587604 ENO1P06733 434 aaKnown RBP12.62□□□□□ -0.39
DNMT1-213ENST00000587604 THBDP07204 575 aa12.62□□□□□ -0.39
DNMT1-213ENST00000587604 ANXA4P09525 319 aaPredicted RBP12.62□□□□□ -0.39
DNMT1-213ENST00000587604 IL11P20809 199 aa12.62□□□□□ -0.39
DNMT1-213ENST00000587604 IMPDH1P20839 514 aa12.62□□□□□ -0.39
DNMT1-213ENST00000587604 NCBP2P52298 156 aaKnown RBP eCLIP12.62□□□□□ -0.39
DNMT1-213ENST00000587604 PSMD4P55036 377 aaKnown RBP12.62□□□□□ -0.39
DNMT1-213ENST00000587604 C17orf67Q0P5P2 114 aa12.62□□□□□ -0.39
DNMT1-213ENST00000587604 C2orf80Q0P641 193 aa12.62□□□□□ -0.39
DNMT1-213ENST00000587604 TMEM44Q2T9K0 475 aa12.62□□□□□ -0.39
DNMT1-213ENST00000587604 BEX5Q5H9J7 111 aa12.62□□□□□ -0.39
DNMT1-213ENST00000587604 MARCH3Q86UD3 253 aa12.62□□□□□ -0.39
DNMT1-213ENST00000587604 TMEM237Q96Q45 408 aa12.62□□□□□ -0.39
DNMT1-213ENST00000587604 EBPLQ9BY08 206 aa12.62□□□□□ -0.39
DNMT1-213ENST00000587604 Q9N2J8 555 aa12.62□□□□□ -0.39
DNMT1-213ENST00000587604 ZNF701Q9NV72 531 aaPredicted RBP12.62□□□□□ -0.39
DNMT1-213ENST00000587604 TAS2R7Q9NYW3 318 aa12.62□□□□□ -0.39
DNMT1-213ENST00000587604 STOML1Q9UBI4 398 aa12.62□□□□□ -0.39
DNMT1-213ENST00000587604 STK38LQ9Y2H1 464 aa12.62□□□□□ -0.39
DNMT1-213ENST00000587604 EMC9Q9Y3B6 208 aa12.62□□□□□ -0.39
DNMT1-213ENST00000587604 CHD3Q12873 2000 aaKnown RBP12.61□□□□□ -0.39
DNMT1-213ENST00000587604 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.61□□□□□ -0.39
DNMT1-213ENST00000587604 SERTM1A2A2V5 107 aa12.61□□□□□ -0.39
DNMT1-213ENST00000587604 CCDC151A5D8V7 595 aa12.61□□□□□ -0.39
DNMT1-213ENST00000587604 UPK1AO00322 258 aa12.61□□□□□ -0.39
DNMT1-213ENST00000587604 DLX3O60479 287 aa12.61□□□□□ -0.39
DNMT1-213ENST00000587604 PSMG1O95456 288 aa12.61□□□□□ -0.39
DNMT1-213ENST00000587604 SNRPAP09012 282 aaKnown RBP12.61□□□□□ -0.39
DNMT1-213ENST00000587604 HTR6P50406 440 aa12.61□□□□□ -0.39
DNMT1-213ENST00000587604 NR1H2P55055 460 aa12.61□□□□□ -0.39
DNMT1-213ENST00000587604 PKNOX1P55347 436 aa12.61□□□□□ -0.39
DNMT1-213ENST00000587604 BTKQ06187 659 aa12.61□□□□□ -0.39
DNMT1-213ENST00000587604 CKAP4Q07065 602 aaKnown RBP12.61□□□□□ -0.39
DNMT1-213ENST00000587604 ZNF763Q0D2J5 394 aa12.61□□□□□ -0.39
DNMT1-213ENST00000587604 ZNHIT3Q15649 155 aaPredicted RBP12.61□□□□□ -0.39
DNMT1-213ENST00000587604 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.61□□□□□ -0.39
DNMT1-213ENST00000587604 PRSS53Q2L4Q9 553 aa12.61□□□□□ -0.39
DNMT1-213ENST00000587604 EXOC3L2Q2M3D2 409 aa12.61□□□□□ -0.39
DNMT1-213ENST00000587604 TMEM107Q6UX40 140 aa12.61□□□□□ -0.39
DNMT1-213ENST00000587604 SYT10Q6XYQ8 523 aa12.61□□□□□ -0.39
DNMT1-213ENST00000587604 GGNQ86UU5 652 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms