RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 HEPHL1Q6MZM0 1159 aa10.64□□□□□ -0.71
BRCA1-225ENST00000586385 PHC2Q8IXK0 858 aa10.64□□□□□ -0.71
BRCA1-225ENST00000586385 CDYL2Q8N8U2 506 aa10.64□□□□□ -0.71
BRCA1-225ENST00000586385 RAB3IL1Q8TBN0 382 aa10.64□□□□□ -0.71
BRCA1-225ENST00000586385 C16orf78Q8WTQ4 265 aa10.64□□□□□ -0.71
BRCA1-225ENST00000586385 DUSP19Q8WTR2 217 aa10.64□□□□□ -0.71
BRCA1-225ENST00000586385 TMEM171Q8WVE6 324 aa10.64□□□□□ -0.71
BRCA1-225ENST00000586385 PLPPR2Q96GM1 343 aa10.64□□□□□ -0.71
BRCA1-225ENST00000586385 FUT8Q9BYC5 575 aa10.64□□□□□ -0.71
BRCA1-225ENST00000586385 PFDN4Q9NQP4 134 aa10.64□□□□□ -0.71
BRCA1-225ENST00000586385 NINJ2Q9NZG7 142 aa10.64□□□□□ -0.71
BRCA1-225ENST00000586385 TMCO1Q9UM00 188 aa10.64□□□□□ -0.71
BRCA1-225ENST00000586385 SNX6Q9UNH7 406 aa10.64□□□□□ -0.71
BRCA1-225ENST00000586385 ABCG2Q9UNQ0 655 aa10.64□□□□□ -0.71
BRCA1-225ENST00000586385 OR10H1Q9Y4A9 318 aa10.64□□□□□ -0.71
BRCA1-225ENST00000586385 PCNX3Q9H6A9 2034 aa10.63□□□□□ -0.71
BRCA1-225ENST00000586385 MXRA5Q9NR99 2828 aa10.63□□□□□ -0.71
BRCA1-225ENST00000586385 MYO1GB0I1T2 1018 aa10.63□□□□□ -0.71
BRCA1-225ENST00000586385 LINC01387J3KSC0 135 aa10.63□□□□□ -0.71
BRCA1-225ENST00000586385 UPK1AO00322 258 aa10.63□□□□□ -0.71
BRCA1-225ENST00000586385 SS18L1O75177 396 aaPredicted RBP10.63□□□□□ -0.71
BRCA1-225ENST00000586385 SMIM24O75264 130 aa10.63□□□□□ -0.71
BRCA1-225ENST00000586385 SOD3P08294 240 aa10.63□□□□□ -0.71
BRCA1-225ENST00000586385 IL11P20809 199 aa10.63□□□□□ -0.71
BRCA1-225ENST00000586385 PSMA4P25789 261 aaKnown RBP10.63□□□□□ -0.71
BRCA1-225ENST00000586385 KRT20P35900 424 aa10.63□□□□□ -0.71
BRCA1-225ENST00000586385 EEFSECP57772 596 aaKnown RBP10.63□□□□□ -0.71
BRCA1-225ENST00000586385 PSPHP78330 225 aa10.63□□□□□ -0.71
BRCA1-225ENST00000586385 CLCQ05315 142 aa10.63□□□□□ -0.71
BRCA1-225ENST00000586385 ZNF155Q12901 538 aaPredicted RBP10.63□□□□□ -0.71
BRCA1-225ENST00000586385 FGFBP1Q14512 234 aa10.63□□□□□ -0.71
BRCA1-225ENST00000586385 GLYR1Q49A26 553 aaPredicted RBP10.63□□□□□ -0.71
BRCA1-225ENST00000586385 CYP27C1Q4G0S4 372 aa10.63□□□□□ -0.71
BRCA1-225ENST00000586385 SH2D4BQ5SQS7 431 aa10.63□□□□□ -0.71
BRCA1-225ENST00000586385 LGSNQ5TDP6 509 aa10.63□□□□□ -0.71
BRCA1-225ENST00000586385 GALNT18Q6P9A2 607 aa10.63□□□□□ -0.71
BRCA1-225ENST00000586385 SEZ6L2Q6UXD5 910 aa10.63□□□□□ -0.71
BRCA1-225ENST00000586385 ATG4DQ86TL0 474 aaPredicted RBP10.63□□□□□ -0.71
BRCA1-225ENST00000586385 WFDC8Q8IUA0 241 aa10.63□□□□□ -0.71
BRCA1-225ENST00000586385 FAM9CQ8IZT9 166 aa10.63□□□□□ -0.71
BRCA1-225ENST00000586385 OR6K3Q8NGY3 331 aa10.63□□□□□ -0.71
BRCA1-225ENST00000586385 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.63□□□□□ -0.71
BRCA1-225ENST00000586385 AKAP1Q92667 903 aaKnown RBP eCLIP10.63□□□□□ -0.71
BRCA1-225ENST00000586385 DTNBP1Q96EV8 351 aa10.63□□□□□ -0.71
BRCA1-225ENST00000586385 MRPL57Q9BQC6 102 aaKnown RBP10.63□□□□□ -0.71
BRCA1-225ENST00000586385 EBPLQ9BY08 206 aa10.63□□□□□ -0.71
BRCA1-225ENST00000586385 FAM120CQ9NX05 1096 aaKnown RBP10.63□□□□□ -0.71
BRCA1-225ENST00000586385 C19orf53Q9UNZ5 99 aaPredicted RBP10.63□□□□□ -0.71
BRCA1-225ENST00000586385 UTP11Q9Y3A2 253 aaKnown RBP10.63□□□□□ -0.71
BRCA1-225ENST00000586385 AP4B1Q9Y6B7 739 aa10.63□□□□□ -0.71
BRCA1-225ENST00000586385 ABCA1O95477 2261 aa10.63□□□□□ -0.71
BRCA1-225ENST00000586385 CHD3Q12873 2000 aaKnown RBP10.62□□□□□ -0.71
BRCA1-225ENST00000586385 A0A087WV62 115 aa10.62□□□□□ -0.71
BRCA1-225ENST00000586385 GXYLT2A0PJZ3 443 aa10.62□□□□□ -0.71
BRCA1-225ENST00000586385 GMFGO60234 142 aa10.62□□□□□ -0.71
BRCA1-225ENST00000586385 TMCC2O75069 709 aa10.62□□□□□ -0.71
BRCA1-225ENST00000586385 IL33O95760 270 aa10.62□□□□□ -0.71
BRCA1-225ENST00000586385 OPN1LWP04000 364 aa10.62□□□□□ -0.71
BRCA1-225ENST00000586385 JUNP05412 331 aaKnown RBP10.62□□□□□ -0.71
BRCA1-225ENST00000586385 DANCRP0C864 163 aa10.62□□□□□ -0.71
BRCA1-225ENST00000586385 HSD3B1P14060 373 aa10.62□□□□□ -0.71
BRCA1-225ENST00000586385 PPP3CBP16298 524 aa10.62□□□□□ -0.71
BRCA1-225ENST00000586385 HSD3B2P26439 372 aa10.62□□□□□ -0.71
BRCA1-225ENST00000586385 TIA1P31483 386 aaKnown RBP eCLIP10.62□□□□□ -0.71
BRCA1-225ENST00000586385 MRPS22P82650 360 aaKnown RBP10.62□□□□□ -0.71
BRCA1-225ENST00000586385 SLC7A5Q01650 507 aa10.62□□□□□ -0.71
BRCA1-225ENST00000586385 DMTNQ08495 405 aa10.62□□□□□ -0.71
BRCA1-225ENST00000586385 CSTF3Q12996 717 aaKnown RBP10.62□□□□□ -0.71
BRCA1-225ENST00000586385 CLEC12BQ2HXU8 276 aa10.62□□□□□ -0.71
BRCA1-225ENST00000586385 MFSD12Q6NUT3 480 aa10.62□□□□□ -0.71
BRCA1-225ENST00000586385 TMEM107Q6UX40 140 aa10.62□□□□□ -0.71
BRCA1-225ENST00000586385 DNM1P46Q6ZS02 220 aa10.62□□□□□ -0.71
BRCA1-225ENST00000586385 OR2L13Q8N349 312 aa10.62□□□□□ -0.71
BRCA1-225ENST00000586385 OR10D3Q8NH80 312 aa10.62□□□□□ -0.71
BRCA1-225ENST00000586385 NEUROG1Q92886 237 aa10.62□□□□□ -0.71
BRCA1-225ENST00000586385 GMPPAQ96IJ6 420 aaPredicted RBP10.62□□□□□ -0.71
BRCA1-225ENST00000586385 TMEM237Q96Q45 408 aa10.62□□□□□ -0.71
BRCA1-225ENST00000586385 ZNF382Q96SR6 550 aa10.62□□□□□ -0.71
BRCA1-225ENST00000586385 REG4Q9BYZ8 158 aa10.62□□□□□ -0.71
BRCA1-225ENST00000586385 ACTR6Q9GZN1 396 aa10.62□□□□□ -0.71
BRCA1-225ENST00000586385 STMN4Q9H169 189 aaPredicted RBP10.62□□□□□ -0.71
BRCA1-225ENST00000586385 MRPL46Q9H2W6 279 aaKnown RBP10.62□□□□□ -0.71
BRCA1-225ENST00000586385 CXorf56Q9H5V9 222 aa10.62□□□□□ -0.71
BRCA1-225ENST00000586385 TAS2R9Q9NYW1 312 aa10.62□□□□□ -0.71
BRCA1-225ENST00000586385 DMGDHQ9UI17 866 aaKnown RBP10.62□□□□□ -0.71
BRCA1-225ENST00000586385 LAMP3Q9UQV4 416 aa10.62□□□□□ -0.71
BRCA1-225ENST00000586385 EIF1AYO14602 144 aaKnown RBP10.61□□□□□ -0.71
BRCA1-225ENST00000586385 UTS2O95399 124 aa10.61□□□□□ -0.71
BRCA1-225ENST00000586385 NTN1O95631 604 aa10.61□□□□□ -0.71
BRCA1-225ENST00000586385 ANGPTL1O95841 491 aa10.61□□□□□ -0.71
BRCA1-225ENST00000586385 COL6A2P12110 1019 aa10.61□□□□□ -0.71
BRCA1-225ENST00000586385 FCGR2AP12318 317 aa10.61□□□□□ -0.71
BRCA1-225ENST00000586385 PSMB1P20618 241 aaKnown RBP10.61□□□□□ -0.71
BRCA1-225ENST00000586385 DDCP20711 480 aa10.61□□□□□ -0.71
BRCA1-225ENST00000586385 MAP3K8P41279 467 aa10.61□□□□□ -0.71
BRCA1-225ENST00000586385 EIF1AXP47813 144 aaKnown RBP10.61□□□□□ -0.71
BRCA1-225ENST00000586385 RPS3AP61247 264 aaKnown RBP10.61□□□□□ -0.71
BRCA1-225ENST00000586385 RPS4XP62701 263 aaKnown RBP10.61□□□□□ -0.71
BRCA1-225ENST00000586385 PRR5P85299 388 aa10.61□□□□□ -0.71
BRCA1-225ENST00000586385 VEZF1Q14119 521 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms