RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 COL6A3P12111 3177 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 DSPPQ9NZW4 1301 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 STMND1H3BQB6 276 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 DPM1O60762 260 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 CBFA2T3O75081 653 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 KCNK2O95069 426 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 TIAF1O95411 115 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 SEMG1P04279 462 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 H1F0P07305 194 aaKnown RBP5.74□□□□□ -1.49
LIG3-206ENST00000586058 FTH1P19P0C7X4 201 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 THRBP10828 461 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 CCL4P13236 92 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 ANXA8P13928 327 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 NID1P14543 1247 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 ITIH1P19827 911 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 CSRP1P21291 193 aaKnown RBP5.74□□□□□ -1.49
LIG3-206ENST00000586058 CD82P27701 267 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 RBMS1P29558 406 aaKnown RBP5.74□□□□□ -1.49
LIG3-206ENST00000586058 PIGAP37287 484 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 DCTP40126 519 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 PPICP45877 212 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 OR1E2P47887 323 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 MAN2A2P49641 1150 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 EMDP50402 254 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 LIMK1P53667 647 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 SLC37A1P57057 533 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 COPZ1P61923 177 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 SNRPNP63162 240 aaKnown RBP5.74□□□□□ -1.49
LIG3-206ENST00000586058 CHRNEQ04844 493 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 FUT5Q11128 374 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 ST3GAL3Q11203 375 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 COL9A2Q14055 689 aaPredicted RBP5.74□□□□□ -1.49
LIG3-206ENST00000586058 EFR3AQ14156 821 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 EXT1Q16394 746 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 NNATQ16517 81 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.74□□□□□ -1.49
LIG3-206ENST00000586058 DCST1Q5T197 706 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 TTC23Q5W5X9 447 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 TYW3Q6IPR3 259 aaKnown RBP5.74□□□□□ -1.49
LIG3-206ENST00000586058 PPP4R4Q6NUP7 873 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 SHQ1Q6PI26 577 aaKnown RBP5.74□□□□□ -1.49
LIG3-206ENST00000586058 DHRS13Q6UX07 377 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 FRRS1Q6ZNA5 592 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 COX15Q7KZN9 410 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 ZNF550Q7Z398 422 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 CPEB2Q7Z5Q1 589 aaKnown RBP5.74□□□□□ -1.49
LIG3-206ENST00000586058 WDR53Q7Z5U6 358 aaPredicted RBP5.74□□□□□ -1.49
LIG3-206ENST00000586058 ANKRD37Q7Z713 158 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 NLGN4XQ8N0W4 816 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 SLC34A3Q8N130 599 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 DHRSXQ8N5I4 330 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 GALNT6Q8NCL4 622 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 SETD9Q8NE22 299 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 C17orf47Q8NEP4 570 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 DEFB124Q8NES8 71 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 NLGN4YQ8NFZ3 816 aaPredicted RBP5.74□□□□□ -1.49
LIG3-206ENST00000586058 OR10Q1Q8NGQ4 319 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 OR2Y1Q8NGV0 311 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 RNF217Q8TC41 542 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 GIPC3Q8TF64 312 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 NRG4Q8WWG1 115 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 CYGBQ8WWM9 190 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 SLC38A4Q969I6 547 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 DTNBP1Q96EV8 351 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 SLC35A4Q96G79 324 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 SENP5Q96HI0 755 aaPredicted RBP5.74□□□□□ -1.49
LIG3-206ENST00000586058 VSTM2LQ96N03 204 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 SDF2Q99470 211 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 TEX12Q9BXU0 123 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 PRRG3Q9BZD7 231 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 TBL1XR1Q9BZK7 514 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 B3GNT4Q9C0J1 378 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 NDEL1Q9GZM8 345 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 WWTR1Q9GZV5 400 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 GABARAPL1Q9H0R8 117 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 ING2Q9H160 280 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 SLC38A1Q9H2H9 487 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 ANKRD19PQ9H560 264 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 COQ10BQ9H8M1 238 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 PDP1Q9P0J1 537 aaPredicted RBP5.74□□□□□ -1.49
LIG3-206ENST00000586058 KCND3Q9UK17 655 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 CDV3Q9UKY7 258 aaKnown RBP5.74□□□□□ -1.49
LIG3-206ENST00000586058 PADI1Q9ULC6 663 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 ABCG2Q9UNQ0 655 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 ERVK-11Q9UQG0 969 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 POFUT2Q9Y2G5 429 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 B3GALT1Q9Y5Z6 326 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 AP4B1Q9Y6B7 739 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 KIAA1549Q9HCM3 1950 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 TRIOO75962 3097 aa5.74□□□□□ -1.49
LIG3-206ENST00000586058 NSG1A0A0A6YYJ2 146 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 TRBV11-1A0A0K0K1C0 115 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 ARRDC5A6NEK1 342 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 AGAP5A6NIR3 686 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 VSTM2BA6NLU5 285 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 C21orf140B9A014 251 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 FAM47E-STBD1D6RA91 191 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 TGFBR3LH3BV60 316 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 M0R3H8 397 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 GTPBP1O00178 669 aaKnown RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms