RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 FBXO30Q8TB52 745 aa19.46■□□□□ 0.71
PPP4R1-228ENST00000584074 SLC9A6Q92581 669 aa19.46■□□□□ 0.71
PPP4R1-228ENST00000584074 RMND5BQ96G75 393 aaPredicted RBP19.46■□□□□ 0.71
PPP4R1-228ENST00000584074 SFXN2Q96NB2 322 aa19.46■□□□□ 0.71
PPP4R1-228ENST00000584074 CALHM2Q9HA72 323 aa19.46■□□□□ 0.71
PPP4R1-228ENST00000584074 C3orf14Q9HBI5 128 aa19.46■□□□□ 0.71
PPP4R1-228ENST00000584074 MED11Q9P086 117 aa19.46■□□□□ 0.71
PPP4R1-228ENST00000584074 MBD3L4A6NDZ8 208 aaPredicted RBP19.45■□□□□ 0.7
PPP4R1-228ENST00000584074 MBD3L3A6NE82 208 aaPredicted RBP19.45■□□□□ 0.7
PPP4R1-228ENST00000584074 MBD3L5A6NJ08 208 aaPredicted RBP19.45■□□□□ 0.7
PPP4R1-228ENST00000584074 TTC36A6NLP5 189 aa19.45■□□□□ 0.7
PPP4R1-228ENST00000584074 H0Y3Z8 333 aa19.45■□□□□ 0.7
PPP4R1-228ENST00000584074 DVL2O14641 736 aa19.45■□□□□ 0.7
PPP4R1-228ENST00000584074 NKX2-2O95096 273 aa19.45■□□□□ 0.7
PPP4R1-228ENST00000584074 KCNH1O95259 989 aa19.45■□□□□ 0.7
PPP4R1-228ENST00000584074 UTS2O95399 124 aa19.45■□□□□ 0.7
PPP4R1-228ENST00000584074 HSPA4LO95757 839 aa19.45■□□□□ 0.7
PPP4R1-228ENST00000584074 LAMP1P11279 417 aa19.45■□□□□ 0.7
PPP4R1-228ENST00000584074 LHX2P50458 406 aa19.45■□□□□ 0.7
PPP4R1-228ENST00000584074 PSMD4P55036 377 aaKnown RBP19.45■□□□□ 0.7
PPP4R1-228ENST00000584074 DSCR4P56555 118 aaPredicted RBP19.45■□□□□ 0.7
PPP4R1-228ENST00000584074 B3GALT5-AS1P59052 145 aa19.45■□□□□ 0.7
PPP4R1-228ENST00000584074 SNTB1Q13884 538 aaKnown RBP19.45■□□□□ 0.7
PPP4R1-228ENST00000584074 MPP2Q14168 576 aa19.45■□□□□ 0.7
PPP4R1-228ENST00000584074 CHI3L2Q15782 390 aa19.45■□□□□ 0.7
PPP4R1-228ENST00000584074 VPS26BQ4G0F5 336 aa19.45■□□□□ 0.7
PPP4R1-228ENST00000584074 CEP85LQ5SZL2 805 aa19.45■□□□□ 0.7
PPP4R1-228ENST00000584074 PLXDC2Q6UX71 529 aa19.45■□□□□ 0.7
PPP4R1-228ENST00000584074 KRTCAP2Q8N6L1 136 aa19.45■□□□□ 0.7
PPP4R1-228ENST00000584074 CDRT4Q8N9R6 151 aa19.45■□□□□ 0.7
PPP4R1-228ENST00000584074 C9orf106Q8NAJ2 232 aa19.45■□□□□ 0.7
PPP4R1-228ENST00000584074 SLC16A11Q8NCK7 471 aa19.45■□□□□ 0.7
PPP4R1-228ENST00000584074 MBD3L2Q8NHZ7 208 aaPredicted RBP19.45■□□□□ 0.7
PPP4R1-228ENST00000584074 DUSP19Q8WTR2 217 aa19.45■□□□□ 0.7
PPP4R1-228ENST00000584074 TUBGCP3Q96CW5 907 aa19.45■□□□□ 0.7
PPP4R1-228ENST00000584074 DTNBP1Q96EV8 351 aa19.45■□□□□ 0.7
PPP4R1-228ENST00000584074 C16orf58Q96GQ5 468 aa19.45■□□□□ 0.7
PPP4R1-228ENST00000584074 ZIM3Q96PE6 472 aa19.45■□□□□ 0.7
PPP4R1-228ENST00000584074 MS4A4EQ96PG1 132 aa19.45■□□□□ 0.7
PPP4R1-228ENST00000584074 G6PC3Q9BUM1 346 aa19.45■□□□□ 0.7
PPP4R1-228ENST00000584074 SSU72Q9NP77 194 aaKnown RBP19.45■□□□□ 0.7
PPP4R1-228ENST00000584074 SDHAF3Q9NRP4 125 aa19.45■□□□□ 0.7
PPP4R1-228ENST00000584074 SIRT3Q9NTG7 399 aaPredicted RBP19.45■□□□□ 0.7
PPP4R1-228ENST00000584074 ZNF629Q9UEG4 869 aaPredicted RBP19.45■□□□□ 0.7
PPP4R1-228ENST00000584074 BIRC5O15392 142 aa19.44■□□□□ 0.7
PPP4R1-228ENST00000584074 EMC8O43402 210 aa19.44■□□□□ 0.7
PPP4R1-228ENST00000584074 SERPINE1P05121 402 aa19.44■□□□□ 0.7
PPP4R1-228ENST00000584074 ACP2P11117 423 aa19.44■□□□□ 0.7
PPP4R1-228ENST00000584074 AGFG1P52594 562 aaKnown RBP19.44■□□□□ 0.7
PPP4R1-228ENST00000584074 MYBPHQ13203 477 aa19.44■□□□□ 0.7
PPP4R1-228ENST00000584074 MLC1Q15049 377 aa19.44■□□□□ 0.7
PPP4R1-228ENST00000584074 GRAMD1BQ3KR37 738 aa19.44■□□□□ 0.7
PPP4R1-228ENST00000584074 MFSD12Q6NUT3 480 aa19.44■□□□□ 0.7
PPP4R1-228ENST00000584074 APOOLQ6UXV4 268 aa19.44■□□□□ 0.7
PPP4R1-228ENST00000584074 OTUB1Q96FW1 271 aaPredicted RBP19.44■□□□□ 0.7
PPP4R1-228ENST00000584074 YIPF4Q9BSR8 244 aa19.44■□□□□ 0.7
PPP4R1-228ENST00000584074 KCNN3Q9UGI6 736 aa19.44■□□□□ 0.7
PPP4R1-228ENST00000584074 L3MBTL1Q9Y468 752 aa19.44■□□□□ 0.7
PPP4R1-228ENST00000584074 POLQO75417 2590 aa19.44■□□□□ 0.7
PPP4R1-228ENST00000584074 AKAP9Q99996 3911 aa19.44■□□□□ 0.7
PPP4R1-228ENST00000584074 KIAA1549Q9HCM3 1950 aa19.43■□□□□ 0.7
PPP4R1-228ENST00000584074 A0A1W2PRB8 838 aa19.43■□□□□ 0.7
PPP4R1-228ENST00000584074 SYT5O00445 386 aa19.43■□□□□ 0.7
PPP4R1-228ENST00000584074 DDX5P17844 614 aaKnown RBP19.43■□□□□ 0.7
PPP4R1-228ENST00000584074 CHMP24386 653 aa19.43■□□□□ 0.7
PPP4R1-228ENST00000584074 UQCRC1P31930 480 aa19.43■□□□□ 0.7
PPP4R1-228ENST00000584074 RPL3P39023 403 aaKnown RBP19.43■□□□□ 0.7
PPP4R1-228ENST00000584074 CLK3P49761 638 aaKnown RBP19.43■□□□□ 0.7
PPP4R1-228ENST00000584074 DGKQP52824 942 aa19.43■□□□□ 0.7
PPP4R1-228ENST00000584074 CLDN18P56856 261 aa19.43■□□□□ 0.7
PPP4R1-228ENST00000584074 DUSP5Q16690 384 aa19.43■□□□□ 0.7
PPP4R1-228ENST00000584074 TNFAIP8L3Q5GJ75 292 aa19.43■□□□□ 0.7
PPP4R1-228ENST00000584074 CPTPQ5TA50 214 aa19.43■□□□□ 0.7
PPP4R1-228ENST00000584074 ARSKQ6UWY0 536 aa19.43■□□□□ 0.7
PPP4R1-228ENST00000584074 ZNF781Q8N8C0 355 aa19.43■□□□□ 0.7
PPP4R1-228ENST00000584074 FAM120BQ96EK7 910 aaKnown RBP19.43■□□□□ 0.7
PPP4R1-228ENST00000584074 ZNF559Q9BR84 538 aa19.43■□□□□ 0.7
PPP4R1-228ENST00000584074 TBL1XR1Q9BZK7 514 aa19.43■□□□□ 0.7
PPP4R1-228ENST00000584074 C20orf27Q9GZN8 174 aa19.43■□□□□ 0.7
PPP4R1-228ENST00000584074 CLCA1A8K7I4 914 aa19.42■□□□□ 0.7
PPP4R1-228ENST00000584074 TM9SF1O15321 606 aa19.42■□□□□ 0.7
PPP4R1-228ENST00000584074 DHRS4L1P0CG22 281 aa19.42■□□□□ 0.7
PPP4R1-228ENST00000584074 ZNF708P17019 499 aa19.42■□□□□ 0.7
PPP4R1-228ENST00000584074 HK1P19367 917 aa19.42■□□□□ 0.7
PPP4R1-228ENST00000584074 CTSSP25774 331 aa19.42■□□□□ 0.7
PPP4R1-228ENST00000584074 ASCL1P50553 236 aa19.42■□□□□ 0.7
PPP4R1-228ENST00000584074 ABCE1P61221 599 aaKnown RBP19.42■□□□□ 0.7
PPP4R1-228ENST00000584074 PDCD2Q16342 344 aaPredicted RBP19.42■□□□□ 0.7
PPP4R1-228ENST00000584074 FIGNL1Q6PIW4 674 aa19.42■□□□□ 0.7
PPP4R1-228ENST00000584074 ZAR1Q86SH2 424 aa19.42■□□□□ 0.7
PPP4R1-228ENST00000584074 ADGRE4PQ86SQ3 457 aa19.42■□□□□ 0.7
PPP4R1-228ENST00000584074 RIMKLAQ8IXN7 391 aa19.42■□□□□ 0.7
PPP4R1-228ENST00000584074 OR5M1Q8NGP8 315 aa19.42■□□□□ 0.7
PPP4R1-228ENST00000584074 OR4C3Q8NH37 302 aa19.42■□□□□ 0.7
PPP4R1-228ENST00000584074 PPP1R36Q96LQ0 422 aa19.42■□□□□ 0.7
PPP4R1-228ENST00000584074 SH3GL2Q99962 352 aa19.42■□□□□ 0.7
PPP4R1-228ENST00000584074 KCNK9Q9NPC2 374 aa19.42■□□□□ 0.7
PPP4R1-228ENST00000584074 ZCCHC3Q9NUD5 404 aaKnown RBP19.42■□□□□ 0.7
PPP4R1-228ENST00000584074 EIF3LQ9Y262 564 aaKnown RBP19.42■□□□□ 0.7
PPP4R1-228ENST00000584074 SNX8Q9Y5X2 465 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms