RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	MARCH3	Q86UD3	253 aa		13.64	□□□□□ -0.23
SREBF1-222	ENST00000583732	SLC22A9	Q8IVM8	553 aa		13.64	□□□□□ -0.23
SREBF1-222	ENST00000583732	CIART	Q8N365	385 aa	Predicted RBP	13.64	□□□□□ -0.23
SREBF1-222	ENST00000583732	CCNYL1	Q8N7R7	359 aa		13.64	□□□□□ -0.23
SREBF1-222	ENST00000583732	ZNF610	Q8N9Z0	462 aa		13.64	□□□□□ -0.23
SREBF1-222	ENST00000583732	DUSP19	Q8WTR2	217 aa		13.64	□□□□□ -0.23
SREBF1-222	ENST00000583732	PERP	Q96FX8	193 aa		13.64	□□□□□ -0.23
SREBF1-222	ENST00000583732	HS3ST6	Q96QI5	342 aa		13.64	□□□□□ -0.23
SREBF1-222	ENST00000583732	GLIPR2	Q9H4G4	154 aa		13.64	□□□□□ -0.23
SREBF1-222	ENST00000583732	GSTO2	Q9H4Y5	243 aa		13.64	□□□□□ -0.23
SREBF1-222	ENST00000583732	PTGES2	Q9H7Z7	377 aa		13.64	□□□□□ -0.23
SREBF1-222	ENST00000583732		Q9N2J8	555 aa		13.64	□□□□□ -0.23
SREBF1-222	ENST00000583732	SDHAF3	Q9NRP4	125 aa		13.64	□□□□□ -0.23
SREBF1-222	ENST00000583732	STK38L	Q9Y2H1	464 aa		13.64	□□□□□ -0.23
SREBF1-222	ENST00000583732	HEATR5A	Q86XA9	2040 aa		13.63	□□□□□ -0.23
SREBF1-222	ENST00000583732	RAI1	Q7Z5J4	1906 aa	Predicted RBP	13.63	□□□□□ -0.23
SREBF1-222	ENST00000583732	CCDC151	A5D8V7	595 aa		13.63	□□□□□ -0.23
SREBF1-222	ENST00000583732	UPK1A	O00322	258 aa		13.63	□□□□□ -0.23
SREBF1-222	ENST00000583732	LY6G6D	O95868	133 aa		13.63	□□□□□ -0.23
SREBF1-222	ENST00000583732	PRKAA2	P54646	552 aa		13.63	□□□□□ -0.23
SREBF1-222	ENST00000583732	GANAB	Q14697	944 aa	Known RBP	13.63	□□□□□ -0.23
SREBF1-222	ENST00000583732	ACKR1	Q16570	336 aa		13.63	□□□□□ -0.23
SREBF1-222	ENST00000583732	GALNT18	Q6P9A2	607 aa		13.63	□□□□□ -0.23
SREBF1-222	ENST00000583732	TIFAB	Q6ZNK6	161 aa		13.63	□□□□□ -0.23
SREBF1-222	ENST00000583732	YTHDF3	Q7Z739	585 aa	Known RBP	13.63	□□□□□ -0.23
SREBF1-222	ENST00000583732	GALNT10	Q86SR1	603 aa		13.63	□□□□□ -0.23
SREBF1-222	ENST00000583732	PIGT	Q969N2	578 aa		13.63	□□□□□ -0.23
SREBF1-222	ENST00000583732	L3HYPDH	Q96EM0	354 aa		13.63	□□□□□ -0.23
SREBF1-222	ENST00000583732	C1GALT1C1	Q96EU7	318 aa		13.63	□□□□□ -0.23
SREBF1-222	ENST00000583732	SLC39A3	Q9BRY0	314 aa		13.63	□□□□□ -0.23
SREBF1-222	ENST00000583732	KLHL4	Q9C0H6	718 aa		13.63	□□□□□ -0.23
SREBF1-222	ENST00000583732	RNF122	Q9H9V4	155 aa		13.63	□□□□□ -0.23
SREBF1-222	ENST00000583732	EQTN	Q9NQ60	294 aa		13.63	□□□□□ -0.23
SREBF1-222	ENST00000583732	FAM120C	Q9NX05	1096 aa	Known RBP	13.63	□□□□□ -0.23
SREBF1-222	ENST00000583732	CLEC4A	Q9UMR7	237 aa		13.63	□□□□□ -0.23
SREBF1-222	ENST00000583732	PROCR	Q9UNN8	238 aa		13.63	□□□□□ -0.23
SREBF1-222	ENST00000583732	ABCG2	Q9UNQ0	655 aa		13.63	□□□□□ -0.23
SREBF1-222	ENST00000583732	C19orf53	Q9UNZ5	99 aa	Predicted RBP	13.63	□□□□□ -0.23
SREBF1-222	ENST00000583732		A0A087WV62	115 aa		13.62	□□□□□ -0.23
SREBF1-222	ENST00000583732	GXYLT2	A0PJZ3	443 aa		13.62	□□□□□ -0.23
SREBF1-222	ENST00000583732	C16orf97	H3BN30	126 aa		13.62	□□□□□ -0.23
SREBF1-222	ENST00000583732	UBFD1	O14562	309 aa	Known RBP	13.62	□□□□□ -0.23
SREBF1-222	ENST00000583732	EMC8	O43402	210 aa		13.62	□□□□□ -0.23
SREBF1-222	ENST00000583732	TNFRSF21	O75509	655 aa		13.62	□□□□□ -0.23
SREBF1-222	ENST00000583732	CRCP	O75575	148 aa		13.62	□□□□□ -0.23
SREBF1-222	ENST00000583732	UTS2	O95399	124 aa		13.62	□□□□□ -0.23
SREBF1-222	ENST00000583732	IL33	O95760	270 aa		13.62	□□□□□ -0.23
SREBF1-222	ENST00000583732	CGA	P01215	116 aa		13.62	□□□□□ -0.23
SREBF1-222	ENST00000583732	FPR1	P21462	350 aa		13.62	□□□□□ -0.23
SREBF1-222	ENST00000583732	GSTM5	P46439	218 aa		13.62	□□□□□ -0.23
SREBF1-222	ENST00000583732	CLK3	P49761	638 aa	Known RBP	13.62	□□□□□ -0.23
SREBF1-222	ENST00000583732	RPS3A	P61247	264 aa	Known RBP	13.62	□□□□□ -0.23
SREBF1-222	ENST00000583732	ZNHIT3	Q15649	155 aa	Predicted RBP	13.62	□□□□□ -0.23
SREBF1-222	ENST00000583732	SGCB	Q16585	318 aa		13.62	□□□□□ -0.23
SREBF1-222	ENST00000583732	CYP27C1	Q4G0S4	372 aa		13.62	□□□□□ -0.23
SREBF1-222	ENST00000583732	FAM71E1	Q6IPT2	247 aa		13.62	□□□□□ -0.23
SREBF1-222	ENST00000583732	PIK3R3	Q92569	461 aa		13.62	□□□□□ -0.23
SREBF1-222	ENST00000583732	C11orf24	Q96F05	449 aa	Predicted RBP	13.62	□□□□□ -0.23
SREBF1-222	ENST00000583732	COX4I2	Q96KJ9	171 aa		13.62	□□□□□ -0.23
SREBF1-222	ENST00000583732	PIP5K1A	Q99755	562 aa		13.62	□□□□□ -0.23
SREBF1-222	ENST00000583732	TBL1XR1	Q9BZK7	514 aa		13.62	□□□□□ -0.23
SREBF1-222	ENST00000583732	SHCBP1L	Q9BZQ2	653 aa		13.62	□□□□□ -0.23
SREBF1-222	ENST00000583732	MYNN	Q9NPC7	610 aa		13.62	□□□□□ -0.23
SREBF1-222	ENST00000583732	ELOVL5	Q9NYP7	299 aa		13.62	□□□□□ -0.23
SREBF1-222	ENST00000583732	VDAC3	Q9Y277	283 aa		13.62	□□□□□ -0.23
SREBF1-222	ENST00000583732	ZNF175	Q9Y473	711 aa		13.62	□□□□□ -0.23
SREBF1-222	ENST00000583732	DSCAM	O60469	2012 aa		13.61	□□□□□ -0.23
SREBF1-222	ENST00000583732	TRIM64	A6NGJ6	449 aa		13.61	□□□□□ -0.23
SREBF1-222	ENST00000583732	TRIM64B	A6NI03	449 aa		13.61	□□□□□ -0.23
SREBF1-222	ENST00000583732	EIF1AY	O14602	144 aa	Known RBP	13.61	□□□□□ -0.23
SREBF1-222	ENST00000583732	AQP8	O94778	261 aa		13.61	□□□□□ -0.23
SREBF1-222	ENST00000583732	PSMG1	O95456	288 aa		13.61	□□□□□ -0.23
SREBF1-222	ENST00000583732	ANGPTL1	O95841	491 aa		13.61	□□□□□ -0.23
SREBF1-222	ENST00000583732	ABHD2	P08910	425 aa		13.61	□□□□□ -0.23
SREBF1-222	ENST00000583732	CD8B	P10966	210 aa		13.61	□□□□□ -0.23
SREBF1-222	ENST00000583732	PYGB	P11216	843 aa		13.61	□□□□□ -0.23
SREBF1-222	ENST00000583732	PCSK6	P29122	969 aa		13.61	□□□□□ -0.23
SREBF1-222	ENST00000583732	EIF1AX	P47813	144 aa	Known RBP	13.61	□□□□□ -0.23
SREBF1-222	ENST00000583732	HSPB3	Q12988	150 aa		13.61	□□□□□ -0.23
SREBF1-222	ENST00000583732	GRAMD1B	Q3KR37	738 aa		13.61	□□□□□ -0.23
SREBF1-222	ENST00000583732	ANKRD26P1	Q6NSI1	321 aa		13.61	□□□□□ -0.23
SREBF1-222	ENST00000583732	C22orf34	Q6ZV56	151 aa		13.61	□□□□□ -0.23
SREBF1-222	ENST00000583732	SZRD1	Q7Z422	152 aa		13.61	□□□□□ -0.23
SREBF1-222	ENST00000583732	LRRC75A-AS1	Q8N1F1	130 aa		13.61	□□□□□ -0.23
SREBF1-222	ENST00000583732	OR2L13	Q8N349	312 aa		13.61	□□□□□ -0.23
SREBF1-222	ENST00000583732	GATS	Q8NAP1	163 aa		13.61	□□□□□ -0.23
SREBF1-222	ENST00000583732	FBXO30	Q8TB52	745 aa		13.61	□□□□□ -0.23
SREBF1-222	ENST00000583732	NUDT8	Q8WV74	236 aa		13.61	□□□□□ -0.23
SREBF1-222	ENST00000583732	SLC9A6	Q92581	669 aa		13.61	□□□□□ -0.23
SREBF1-222	ENST00000583732	GFM2	Q969S9	779 aa	Known RBP	13.61	□□□□□ -0.23
SREBF1-222	ENST00000583732	ELP4	Q96EB1	424 aa		13.61	□□□□□ -0.23
SREBF1-222	ENST00000583732	ARSG	Q96EG1	525 aa		13.61	□□□□□ -0.23
SREBF1-222	ENST00000583732	AMDHD1	Q96NU7	426 aa		13.61	□□□□□ -0.23
SREBF1-222	ENST00000583732	LMF2	Q9BU23	707 aa	Known RBP	13.61	□□□□□ -0.23
SREBF1-222	ENST00000583732	PRRG4	Q9BZD6	226 aa		13.61	□□□□□ -0.23
SREBF1-222	ENST00000583732	TBK1	Q9UHD2	729 aa		13.61	□□□□□ -0.23
SREBF1-222	ENST00000583732	MRTO4	Q9UKD2	239 aa	Known RBP	13.61	□□□□□ -0.23
SREBF1-222	ENST00000583732	GRID1	Q9ULK0	1009 aa		13.61	□□□□□ -0.23
SREBF1-222	ENST00000583732	FAM171A2	A8MVW0	826 aa		13.6	□□□□□ -0.23
SREBF1-222	ENST00000583732	RIPK2	O43353	540 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms