RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 LRRC3CA6NJW4 275 aa22.71■■□□□ 1.23
TSEN54-209ENST00000583454 C9JVG2 144 aa22.71■■□□□ 1.23
TSEN54-209ENST00000583454 IL33O95760 270 aa22.71■■□□□ 1.23
TSEN54-209ENST00000583454 PGRP06401 933 aa22.71■■□□□ 1.23
TSEN54-209ENST00000583454 IL12BP29460 328 aa22.71■■□□□ 1.23
TSEN54-209ENST00000583454 PTGS2P35354 604 aa22.71■■□□□ 1.23
TSEN54-209ENST00000583454 PTGDSP41222 190 aa22.71■■□□□ 1.23
TSEN54-209ENST00000583454 ZFP36L2P47974 494 aaKnown RBP22.71■■□□□ 1.23
TSEN54-209ENST00000583454 MRPS22P82650 360 aaKnown RBP22.71■■□□□ 1.23
TSEN54-209ENST00000583454 DUSP5Q16690 384 aa22.71■■□□□ 1.23
TSEN54-209ENST00000583454 DECR1Q16698 335 aa22.71■■□□□ 1.23
TSEN54-209ENST00000583454 SPDYE7PQ495Y7 208 aa22.71■■□□□ 1.23
TSEN54-209ENST00000583454 SLC30A6Q6NXT4 461 aa22.71■■□□□ 1.23
TSEN54-209ENST00000583454 ANKRD46Q86W74 232 aa22.71■■□□□ 1.23
TSEN54-209ENST00000583454 MIER2Q8N344 545 aa22.71■■□□□ 1.23
TSEN54-209ENST00000583454 TMEM251Q8N6I4 163 aa22.71■■□□□ 1.23
TSEN54-209ENST00000583454 OR52N2Q8NGI0 321 aa22.71■■□□□ 1.23
TSEN54-209ENST00000583454 GOT1L1Q8NHS2 421 aaPredicted RBP22.71■■□□□ 1.23
TSEN54-209ENST00000583454 GPR151Q8TDV0 419 aa22.71■■□□□ 1.23
TSEN54-209ENST00000583454 EFHD2Q96C19 240 aaPredicted RBP22.71■■□□□ 1.23
TSEN54-209ENST00000583454 CCDC115Q96NT0 180 aa22.71■■□□□ 1.23
TSEN54-209ENST00000583454 TREX2Q9BQ50 279 aaPredicted RBP22.71■■□□□ 1.23
TSEN54-209ENST00000583454 SIKE1Q9BRV8 207 aa22.71■■□□□ 1.23
TSEN54-209ENST00000583454 ENKD1Q9H0I2 346 aa22.71■■□□□ 1.23
TSEN54-209ENST00000583454 CCDC134Q9H6E4 229 aa22.71■■□□□ 1.23
TSEN54-209ENST00000583454 GIN1Q9NXP7 522 aa22.71■■□□□ 1.23
TSEN54-209ENST00000583454 FAM166BA8MTA8 275 aa22.7■■□□□ 1.22
TSEN54-209ENST00000583454 ACOT7O00154 380 aa22.7■■□□□ 1.22
TSEN54-209ENST00000583454 IL6P05231 212 aa22.7■■□□□ 1.22
TSEN54-209ENST00000583454 ALOX5P09917 674 aa22.7■■□□□ 1.22
TSEN54-209ENST00000583454 GUCY1A3Q02108 690 aa22.7■■□□□ 1.22
TSEN54-209ENST00000583454 TP53BP2Q13625 1128 aa22.7■■□□□ 1.22
TSEN54-209ENST00000583454 LASP1Q14847 261 aaKnown RBP22.7■■□□□ 1.22
TSEN54-209ENST00000583454 FNDC7Q5VTL7 733 aa22.7■■□□□ 1.22
TSEN54-209ENST00000583454 CDC73Q6P1J9 531 aa22.7■■□□□ 1.22
TSEN54-209ENST00000583454 CD163Q86VB7 1156 aa22.7■■□□□ 1.22
TSEN54-209ENST00000583454 OR4A15Q8NGL6 344 aa22.7■■□□□ 1.22
TSEN54-209ENST00000583454 FAM110BQ8TC76 370 aa22.7■■□□□ 1.22
TSEN54-209ENST00000583454 PIK3R3Q92569 461 aa22.7■■□□□ 1.22
TSEN54-209ENST00000583454 SLC9A6Q92581 669 aa22.7■■□□□ 1.22
TSEN54-209ENST00000583454 STACQ99469 402 aa22.7■■□□□ 1.22
TSEN54-209ENST00000583454 ACTRT3Q9BYD9 372 aa22.7■■□□□ 1.22
TSEN54-209ENST00000583454 METTL7AQ9H8H3 244 aa22.7■■□□□ 1.22
TSEN54-209ENST00000583454 DUSP22Q9NRW4 184 aa22.7■■□□□ 1.22
TSEN54-209ENST00000583454 MRTO4Q9UKD2 239 aaKnown RBP22.7■■□□□ 1.22
TSEN54-209ENST00000583454 NCKAP5O14513 1909 aa22.7■■□□□ 1.22
TSEN54-209ENST00000583454 PRAMEF25A6NGN4 478 aa22.69■■□□□ 1.22
TSEN54-209ENST00000583454 ICOSLGO75144 302 aa22.69■■□□□ 1.22
TSEN54-209ENST00000583454 CPSF4O95639 269 aaKnown RBP22.69■■□□□ 1.22
TSEN54-209ENST00000583454 CYP4B1P13584 511 aa22.69■■□□□ 1.22
TSEN54-209ENST00000583454 MAN2A2P49641 1150 aa22.69■■□□□ 1.22
TSEN54-209ENST00000583454 KRTAP10-9P60411 292 aa22.69■■□□□ 1.22
TSEN54-209ENST00000583454 LRRC74AQ0VAA2 488 aa22.69■■□□□ 1.22
TSEN54-209ENST00000583454 EMC4Q5J8M3 183 aa22.69■■□□□ 1.22
TSEN54-209ENST00000583454 BHLHB9Q6PI77 547 aa22.69■■□□□ 1.22
TSEN54-209ENST00000583454 PAOXQ6QHF9 649 aa22.69■■□□□ 1.22
TSEN54-209ENST00000583454 PACS2Q86VP3 889 aa22.69■■□□□ 1.22
TSEN54-209ENST00000583454 FAM109AQ8N4B1 249 aa22.69■■□□□ 1.22
TSEN54-209ENST00000583454 RFWD2Q8NHY2 731 aa22.69■■□□□ 1.22
TSEN54-209ENST00000583454 TMEM41AQ96HV5 264 aa22.69■■□□□ 1.22
TSEN54-209ENST00000583454 OR52E6Q96RD3 313 aa22.69■■□□□ 1.22
TSEN54-209ENST00000583454 SPOCK3Q9BQ16 436 aa22.69■■□□□ 1.22
TSEN54-209ENST00000583454 YIPF4Q9BSR8 244 aa22.69■■□□□ 1.22
TSEN54-209ENST00000583454 PIGUQ9H490 435 aa22.69■■□□□ 1.22
TSEN54-209ENST00000583454 NPHS2Q9NP85 383 aa22.69■■□□□ 1.22
TSEN54-209ENST00000583454 CDC40O60508 579 aaKnown RBP eCLIP22.68■■□□□ 1.22
TSEN54-209ENST00000583454 SOX30O94993 753 aa22.68■■□□□ 1.22
TSEN54-209ENST00000583454 KCNH1O95259 989 aa22.68■■□□□ 1.22
TSEN54-209ENST00000583454 IGKV1D-16P01601 117 aa22.68■■□□□ 1.22
TSEN54-209ENST00000583454 TPOP07202 933 aa22.68■■□□□ 1.22
TSEN54-209ENST00000583454 KRT16P08779 473 aa22.68■■□□□ 1.22
TSEN54-209ENST00000583454 RFPL3SP0C7P2 107 aa22.68■■□□□ 1.22
TSEN54-209ENST00000583454 UQCRC2P22695 453 aa22.68■■□□□ 1.22
TSEN54-209ENST00000583454 PSMD4P55036 377 aaKnown RBP22.68■■□□□ 1.22
TSEN54-209ENST00000583454 IRX1P78414 480 aaPredicted RBP22.68■■□□□ 1.22
TSEN54-209ENST00000583454 TIGD3Q6B0B8 471 aa22.68■■□□□ 1.22
TSEN54-209ENST00000583454 C6orf120Q7Z4R8 191 aa22.68■■□□□ 1.22
TSEN54-209ENST00000583454 OR9I1Q8NGQ6 314 aa22.68■■□□□ 1.22
TSEN54-209ENST00000583454 OR5AK3PQ8NH89 298 aa22.68■■□□□ 1.22
TSEN54-209ENST00000583454 FBXO30Q8TB52 745 aa22.68■■□□□ 1.22
TSEN54-209ENST00000583454 SDCCAG3Q96C92 435 aa22.68■■□□□ 1.22
TSEN54-209ENST00000583454 THOC1Q96FV9 657 aaKnown RBP22.68■■□□□ 1.22
TSEN54-209ENST00000583454 RMND5BQ96G75 393 aaPredicted RBP22.68■■□□□ 1.22
TSEN54-209ENST00000583454 ZNF597Q96LX8 424 aa22.68■■□□□ 1.22
TSEN54-209ENST00000583454 OSBPL11Q9BXB4 747 aa22.68■■□□□ 1.22
TSEN54-209ENST00000583454 DEFB127Q9H1M4 99 aa22.68■■□□□ 1.22
TSEN54-209ENST00000583454 FAF1Q9UNN5 650 aaPredicted RBP22.68■■□□□ 1.22
TSEN54-209ENST00000583454 SPG11Q96JI7 2443 aa22.68■■□□□ 1.22
TSEN54-209ENST00000583454 FAM234BA2RU67 622 aa22.67■■□□□ 1.22
TSEN54-209ENST00000583454 DYNC1I1O14576 645 aa22.67■■□□□ 1.22
TSEN54-209ENST00000583454 FADS1O60427 444 aa22.67■■□□□ 1.22
TSEN54-209ENST00000583454 KCNK2O95069 426 aa22.67■■□□□ 1.22
TSEN54-209ENST00000583454 IGHG3P01860 377 aa22.67■■□□□ 1.22
TSEN54-209ENST00000583454 SOAT1P35610 550 aa22.67■■□□□ 1.22
TSEN54-209ENST00000583454 MDH1P40925 334 aaKnown RBP22.67■■□□□ 1.22
TSEN54-209ENST00000583454 MAGEA5P43359 124 aa22.67■■□□□ 1.22
TSEN54-209ENST00000583454 POLR2JP52435 117 aaKnown RBP22.67■■□□□ 1.22
TSEN54-209ENST00000583454 MSANTD1Q6ZTZ1 278 aa22.67■■□□□ 1.22
TSEN54-209ENST00000583454 CLEC4FQ8N1N0 589 aa22.67■■□□□ 1.22
TSEN54-209ENST00000583454 RPRMLQ8N4K4 120 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms