RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 NSMCE2Q96MF7 247 aa16.5■□□□□ 0.23
SNX11-212ENST00000583320 CRB3Q9BUF7 120 aa16.5■□□□□ 0.23
SNX11-212ENST00000583320 YIPF2Q9BWQ6 316 aa16.5■□□□□ 0.23
SNX11-212ENST00000583320 ALOXE3Q9BYJ1 711 aa16.5■□□□□ 0.23
SNX11-212ENST00000583320 RBCK1Q9BYM8 510 aa16.5■□□□□ 0.23
SNX11-212ENST00000583320 MAT2BQ9NZL9 334 aa16.5■□□□□ 0.23
SNX11-212ENST00000583320 FAF1Q9UNN5 650 aaPredicted RBP16.5■□□□□ 0.23
SNX11-212ENST00000583320 USP22Q9UPT9 525 aa16.5■□□□□ 0.23
SNX11-212ENST00000583320 IGKV3D-11A0A0A0MRZ8 115 aa16.49■□□□□ 0.23
SNX11-212ENST00000583320 UPK1AO00322 258 aa16.49■□□□□ 0.23
SNX11-212ENST00000583320 ASNA1O43681 348 aa16.49■□□□□ 0.23
SNX11-212ENST00000583320 OR10H2O60403 315 aa16.49■□□□□ 0.23
SNX11-212ENST00000583320 SOX30O94993 753 aa16.49■□□□□ 0.23
SNX11-212ENST00000583320 RASAL1O95294 804 aa16.49■□□□□ 0.23
SNX11-212ENST00000583320 C1QCP02747 245 aa16.49■□□□□ 0.23
SNX11-212ENST00000583320 ARAFP10398 606 aa16.49■□□□□ 0.23
SNX11-212ENST00000583320 COX6A1P12074 109 aa16.49■□□□□ 0.23
SNX11-212ENST00000583320 ETFAP13804 333 aa16.49■□□□□ 0.23
SNX11-212ENST00000583320 HOXB6P17509 224 aaKnown RBP16.49■□□□□ 0.23
SNX11-212ENST00000583320 PRIM2P49643 509 aa16.49■□□□□ 0.23
SNX11-212ENST00000583320 KHKP50053 298 aa16.49■□□□□ 0.23
SNX11-212ENST00000583320 DSTNP60981 165 aa16.49■□□□□ 0.23
SNX11-212ENST00000583320 BTG2P78543 158 aa16.49■□□□□ 0.23
SNX11-212ENST00000583320 MGAT2Q10469 447 aa16.49■□□□□ 0.23
SNX11-212ENST00000583320 LTB4RQ15722 352 aa16.49■□□□□ 0.23
SNX11-212ENST00000583320 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.49■□□□□ 0.23
SNX11-212ENST00000583320 COX20Q5RI15 118 aa16.49■□□□□ 0.23
SNX11-212ENST00000583320 FAAH2Q6GMR7 532 aa16.49■□□□□ 0.23
SNX11-212ENST00000583320 SPATA24Q86W54 205 aa16.49■□□□□ 0.23
SNX11-212ENST00000583320 KBTBD2Q8IY47 623 aa16.49■□□□□ 0.23
SNX11-212ENST00000583320 SHISA5Q8N114 240 aa16.49■□□□□ 0.23
SNX11-212ENST00000583320 OR7G2Q8NG99 324 aa16.49■□□□□ 0.23
SNX11-212ENST00000583320 SLC26A7Q8TE54 656 aa16.49■□□□□ 0.23
SNX11-212ENST00000583320 HAS2Q92819 552 aa16.49■□□□□ 0.23
SNX11-212ENST00000583320 DGAT2Q96PD7 388 aa16.49■□□□□ 0.23
SNX11-212ENST00000583320 MS4A4EQ96PG1 132 aa16.49■□□□□ 0.23
SNX11-212ENST00000583320 SPOCK3Q9BQ16 436 aa16.49■□□□□ 0.23
SNX11-212ENST00000583320 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.49■□□□□ 0.23
SNX11-212ENST00000583320 RNPEPL1Q9HAU8 725 aa16.49■□□□□ 0.23
SNX11-212ENST00000583320 S100A14Q9HCY8 104 aa16.49■□□□□ 0.23
SNX11-212ENST00000583320 A4GALTQ9NPC4 353 aa16.49■□□□□ 0.23
SNX11-212ENST00000583320 DDX18Q9NVP1 670 aaKnown RBP16.49■□□□□ 0.23
SNX11-212ENST00000583320 ZNF639Q9UID6 485 aa16.49■□□□□ 0.23
SNX11-212ENST00000583320 NXT1Q9UKK6 140 aaKnown RBP16.49■□□□□ 0.23
SNX11-212ENST00000583320 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.48■□□□□ 0.23
SNX11-212ENST00000583320 TGFBR3LH3BV60 316 aa16.48■□□□□ 0.23
SNX11-212ENST00000583320 WDPCPO95876 746 aa16.48■□□□□ 0.23
SNX11-212ENST00000583320 AGR2O95994 175 aa16.48■□□□□ 0.23
SNX11-212ENST00000583320 GPIP06744 558 aa16.48■□□□□ 0.23
SNX11-212ENST00000583320 MATN1P21941 496 aa16.48■□□□□ 0.23
SNX11-212ENST00000583320 SMSP52788 366 aa16.48■□□□□ 0.23
SNX11-212ENST00000583320 ART1P52961 327 aa16.48■□□□□ 0.23
SNX11-212ENST00000583320 AP2B1P63010 937 aa16.48■□□□□ 0.23
SNX11-212ENST00000583320 RHAGQ02094 409 aa16.48■□□□□ 0.23
SNX11-212ENST00000583320 OCA2Q04671 838 aa16.48■□□□□ 0.23
SNX11-212ENST00000583320 EEF1A2Q05639 463 aaKnown RBP16.48■□□□□ 0.23
SNX11-212ENST00000583320 INTS11Q5TA45 600 aaKnown RBP16.48■□□□□ 0.23
SNX11-212ENST00000583320 CYP2R1Q6VVX0 501 aa16.48■□□□□ 0.23
SNX11-212ENST00000583320 GALNT12Q8IXK2 581 aa16.48■□□□□ 0.23
SNX11-212ENST00000583320 LGI4Q8N135 537 aa16.48■□□□□ 0.23
SNX11-212ENST00000583320 EID3Q8N140 333 aa16.48■□□□□ 0.23
SNX11-212ENST00000583320 HORMAD2Q8N7B1 307 aa16.48■□□□□ 0.23
SNX11-212ENST00000583320 ADCY4Q8NFM4 1077 aa16.48■□□□□ 0.23
SNX11-212ENST00000583320 KAT2AQ92830 837 aa16.48■□□□□ 0.23
SNX11-212ENST00000583320 GIMAP5Q96F15 307 aa16.48■□□□□ 0.23
SNX11-212ENST00000583320 RSRC1Q96IZ7 334 aaKnown RBP16.48■□□□□ 0.23
SNX11-212ENST00000583320 PTCHD1Q96NR3 888 aa16.48■□□□□ 0.23
SNX11-212ENST00000583320 TMUB1Q9BVT8 246 aa16.48■□□□□ 0.23
SNX11-212ENST00000583320 ACTRT3Q9BYD9 372 aa16.48■□□□□ 0.23
SNX11-212ENST00000583320 ENKD1Q9H0I2 346 aa16.48■□□□□ 0.23
SNX11-212ENST00000583320 CXorf21Q9HAI6 301 aa16.48■□□□□ 0.23
SNX11-212ENST00000583320 NECTIN3Q9NQS3 549 aa16.48■□□□□ 0.23
SNX11-212ENST00000583320 TCRBV5S2A0A599 114 aa16.47■□□□□ 0.23
SNX11-212ENST00000583320 DUXAA6NLW8 204 aa16.47■□□□□ 0.23
SNX11-212ENST00000583320 ZNHIT1O43257 154 aa16.47■□□□□ 0.23
SNX11-212ENST00000583320 COQ9O75208 318 aa16.47■□□□□ 0.23
SNX11-212ENST00000583320 CDC123O75794 336 aaPredicted RBP16.47■□□□□ 0.23
SNX11-212ENST00000583320 CRYABP02511 175 aaKnown RBP16.47■□□□□ 0.23
SNX11-212ENST00000583320 HMGN2P05204 90 aaKnown RBP16.47■□□□□ 0.23
SNX11-212ENST00000583320 NUDT7P0C024 238 aa16.47■□□□□ 0.23
SNX11-212ENST00000583320 NCK1P16333 377 aa16.47■□□□□ 0.23
SNX11-212ENST00000583320 SOX18P35713 384 aa16.47■□□□□ 0.23
SNX11-212ENST00000583320 RBPJQ06330 500 aa16.47■□□□□ 0.23
SNX11-212ENST00000583320 EXOSC6Q5RKV6 272 aaKnown RBP16.47■□□□□ 0.23
SNX11-212ENST00000583320 FBXW10Q5XX13 1052 aa16.47■□□□□ 0.23
SNX11-212ENST00000583320 CDC73Q6P1J9 531 aa16.47■□□□□ 0.23
SNX11-212ENST00000583320 MEX3BQ6ZN04 569 aaKnown RBP16.47■□□□□ 0.23
SNX11-212ENST00000583320 CCDC80Q76M96 950 aa16.47■□□□□ 0.23
SNX11-212ENST00000583320 SPPL2CQ8IUH8 684 aa16.47■□□□□ 0.23
SNX11-212ENST00000583320 VWA5B2Q8N398 1253 aa16.47■□□□□ 0.23
SNX11-212ENST00000583320 HIPK4Q8NE63 616 aa16.47■□□□□ 0.23
SNX11-212ENST00000583320 STT3BQ8TCJ2 826 aa16.47■□□□□ 0.23
SNX11-212ENST00000583320 FIG4Q92562 907 aa16.47■□□□□ 0.23
SNX11-212ENST00000583320 RIT1Q92963 219 aa16.47■□□□□ 0.23
SNX11-212ENST00000583320 FAM162AQ96A26 154 aa16.47■□□□□ 0.23
SNX11-212ENST00000583320 TREX2Q9BQ50 279 aaPredicted RBP16.47■□□□□ 0.23
SNX11-212ENST00000583320 SERHL2Q9H4I8 314 aa16.47■□□□□ 0.23
SNX11-212ENST00000583320 STX18Q9P2W9 335 aaKnown RBP16.47■□□□□ 0.23
SNX11-212ENST00000583320 C3orf18Q9UK00 162 aa16.47■□□□□ 0.23
SNX11-212ENST00000583320 PRRC2AP48634 2157 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms