RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	SLC18A1	P54219	525 aa		11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	ABCE1	P61221	599 aa	Known RBP	11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	OCRL	Q01968	901 aa		11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	EMX2	Q04743	252 aa		11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	C17orf67	Q0P5P2	114 aa		11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	LSM12	Q3MHD2	195 aa	Known RBP	11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	FBXL19-AS1	Q494R0	122 aa		11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	ZNF385B	Q569K4	471 aa		11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	CEP85L	Q5SZL2	805 aa		11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	CPTP	Q5TA50	214 aa		11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	SEM1	Q6ZVN7	128 aa		11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	CAMKMT	Q7Z624	323 aa		11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	YRDC	Q86U90	279 aa	Known RBP	11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	TRIM42	Q8IWZ5	723 aa		11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	FNDC5	Q8NAU1	212 aa		11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	NUP43	Q8NFH3	380 aa		11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	OR4K17	Q8NGC6	315 aa		11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	OR5P2	Q8WZ92	322 aa		11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	CIDEC	Q96AQ7	238 aa	Predicted RBP	11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	MOAP1	Q96BY2	351 aa		11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	TUBGCP3	Q96CW5	907 aa		11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	COQ8B	Q96D53	544 aa		11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	TM9SF2	Q99805	663 aa		11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	UCK2	Q9BZX2	261 aa		11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	ACBD3	Q9H3P7	528 aa		11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	MCCC2	Q9HCC0	563 aa		11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	NEUROD4	Q9HD90	331 aa		11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	NOP53	Q9NZM5	478 aa	Known RBP	11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	PPP4R1L	Q9P1A2	415 aa		11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	DKKL1	Q9UK85	242 aa		11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	RAP2C	Q9Y3L5	183 aa		11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		11.43	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708		A0A1W2PRB8	838 aa		11.43	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	NKX2-6	A6NCS4	301 aa		11.43	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	C2orf72	A6NCS6	295 aa		11.43	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	ZIC3	O60481	467 aa		11.43	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	ERLIN1	O75477	346 aa		11.43	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	DPP4	P27487	766 aa		11.43	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	OPRM1	P35372	400 aa		11.43	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	PRIM2	P49643	509 aa		11.43	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	RPL14	P50914	215 aa	Known RBP	11.43	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	DIO3	P55073	304 aa		11.43	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	EEFSEC	P57772	596 aa	Known RBP	11.43	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	CHI3L2	Q15782	390 aa		11.43	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	EXOSC6	Q5RKV6	272 aa	Known RBP	11.43	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	IL23R	Q5VWK5	629 aa		11.43	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	ANKRD26P1	Q6NSI1	321 aa		11.43	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	MFSD12	Q6NUT3	480 aa		11.43	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	BHLHB9	Q6PI77	547 aa		11.43	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	ADGRE4P	Q86SQ3	457 aa		11.43	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	MISP	Q8IVT2	679 aa		11.43	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	RIMKLA	Q8IXN7	391 aa		11.43	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	OR56A1	Q8NGH5	318 aa		11.43	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	CLHC1	Q8NHS4	586 aa		11.43	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	FAM110B	Q8TC76	370 aa		11.43	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	AGR3	Q8TD06	166 aa		11.43	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	GPR151	Q8TDV0	419 aa		11.43	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	WNT2B	Q93097	391 aa		11.43	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	GIMAP5	Q96F15	307 aa		11.43	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	C3orf30	Q96M34	536 aa		11.43	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	SFXN2	Q96NB2	322 aa		11.43	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	STAC	Q99469	402 aa		11.43	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	G6PC3	Q9BUM1	346 aa		11.43	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	TBL1XR1	Q9BZK7	514 aa		11.43	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	BHLHE41	Q9C0J9	482 aa	Predicted RBP	11.43	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	DUSP22	Q9NRW4	184 aa		11.43	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	FBXL2	Q9UKC9	423 aa		11.43	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	ANKRD17	O75179	2603 aa	Known RBP	11.43	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	ALG1L2	C9J202	215 aa		11.42	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	NME6	O75414	186 aa	Predicted RBP	11.42	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	UTS2	O95399	124 aa		11.42	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	CRH	P06850	196 aa		11.42	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	SNRPB2	P08579	225 aa	Known RBP	11.42	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	ALOX5	P09917	674 aa		11.42	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	PEPD	P12955	493 aa		11.42	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	TBXA2R	P21731	343 aa		11.42	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	CTSS	P25774	331 aa		11.42	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	LHX2	P50458	406 aa		11.42	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	ASCL1	P50553	236 aa		11.42	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	CLDN8	P56748	225 aa		11.42	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	PTGR1	Q14914	329 aa		11.42	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	CES4A	Q5XG92	561 aa		11.42	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	LIX1L	Q8IVB5	337 aa		11.42	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	OR2M3	Q8NG83	312 aa		11.42	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	SFXN5	Q8TD22	340 aa		11.42	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	FAM120B	Q96EK7	910 aa	Known RBP	11.42	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	PKNOX2	Q96KN3	472 aa		11.42	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	LURAP1	Q96LR2	239 aa		11.42	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	TRIB1	Q96RU8	372 aa		11.42	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	PIGQ	Q9BRB3	760 aa		11.42	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	UBQLN4	Q9NRR5	601 aa		11.42	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	ZCCHC3	Q9NUD5	404 aa	Known RBP	11.42	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	STOML1	Q9UBI4	398 aa		11.42	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	POLQ	O75417	2590 aa		11.42	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708		A0A087WZY1	265 aa		11.41	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708		H0Y3Z8	333 aa		11.41	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	SKAP2	O75563	359 aa	Predicted RBP	11.41	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	KCNK2	O95069	426 aa		11.41	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	RCBTB2	O95199	551 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms