RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 NDST2P52849 883 aa3.61□□□□□ -1.83
NF1-220ENST00000581113 KRTAP10-12P60413 245 aa3.61□□□□□ -1.83
NF1-220ENST00000581113 ACTR3P61158 418 aa3.61□□□□□ -1.83
NF1-220ENST00000581113 FKBP1AP62942 108 aaKnown RBP3.61□□□□□ -1.83
NF1-220ENST00000581113 SPIBQ01892 262 aa3.61□□□□□ -1.83
NF1-220ENST00000581113 LCP2Q13094 533 aa3.61□□□□□ -1.83
NF1-220ENST00000581113 KIAA0141Q14154 515 aaPredicted RBP3.61□□□□□ -1.83
NF1-220ENST00000581113 IQCCQ4KMZ1 466 aa3.61□□□□□ -1.83
NF1-220ENST00000581113 HSP90AA4PQ58FG1 418 aa3.61□□□□□ -1.83
NF1-220ENST00000581113 ARMCX4Q5H9R4 360 aa3.61□□□□□ -1.83
NF1-220ENST00000581113 PRAMEF20Q5VT98 475 aa3.61□□□□□ -1.83
NF1-220ENST00000581113 ZNF770Q6IQ21 691 aaPredicted RBP3.61□□□□□ -1.83
NF1-220ENST00000581113 MOB2Q70IA6 237 aa3.61□□□□□ -1.83
NF1-220ENST00000581113 ANKRD46Q86W74 232 aa3.61□□□□□ -1.83
NF1-220ENST00000581113 FAM131BQ86XD5 332 aa3.61□□□□□ -1.83
NF1-220ENST00000581113 APOBEC3FQ8IUX4 373 aaKnown RBP3.61□□□□□ -1.83
NF1-220ENST00000581113 GRAMD2AQ8IUY3 354 aa3.61□□□□□ -1.83
NF1-220ENST00000581113 DND1Q8IYX4 353 aaKnown RBP3.61□□□□□ -1.83
NF1-220ENST00000581113 SLC43A2Q8N370 569 aa3.61□□□□□ -1.83
NF1-220ENST00000581113 CERS5Q8N5B7 392 aa3.61□□□□□ -1.83
NF1-220ENST00000581113 KIAA0895Q8NCT3 520 aa3.61□□□□□ -1.83
NF1-220ENST00000581113 ZBED3Q96IU2 234 aaPredicted RBP3.61□□□□□ -1.83
NF1-220ENST00000581113 LURAP1Q96LR2 239 aa3.61□□□□□ -1.83
NF1-220ENST00000581113 PCDHB18PQ96TA0 734 aa3.61□□□□□ -1.83
NF1-220ENST00000581113 ZBTB18Q99592 522 aa3.61□□□□□ -1.83
NF1-220ENST00000581113 GAL3ST1Q99999 423 aa3.61□□□□□ -1.83
NF1-220ENST00000581113 C19orf43Q9BQ61 176 aa3.61□□□□□ -1.83
NF1-220ENST00000581113 SOSTQ9BQB4 213 aa3.61□□□□□ -1.83
NF1-220ENST00000581113 PYGO2Q9BRQ0 406 aa3.61□□□□□ -1.83
NF1-220ENST00000581113 PAPOLGQ9BWT3 736 aaKnown RBP3.61□□□□□ -1.83
NF1-220ENST00000581113 POLR1EQ9GZS1 481 aaKnown RBP3.61□□□□□ -1.83
NF1-220ENST00000581113 PARLQ9H300 379 aa3.61□□□□□ -1.83
NF1-220ENST00000581113 ECT2Q9H8V3 914 aa3.61□□□□□ -1.83
NF1-220ENST00000581113 AKIRIN1Q9H9L7 192 aaPredicted RBP3.61□□□□□ -1.83
NF1-220ENST00000581113 QPCTLQ9NXS2 382 aa3.61□□□□□ -1.83
NF1-220ENST00000581113 SPG21Q9NZD8 308 aa3.61□□□□□ -1.83
NF1-220ENST00000581113 CHMP5Q9NZZ3 219 aa3.61□□□□□ -1.83
NF1-220ENST00000581113 LEF1Q9UJU2 399 aaPredicted RBP3.61□□□□□ -1.83
NF1-220ENST00000581113 ZNF510Q9Y2H8 683 aa3.61□□□□□ -1.83
NF1-220ENST00000581113 C15orf41Q9Y2V0 281 aa3.61□□□□□ -1.83
NF1-220ENST00000581113 COMMD3-BMI1R4GMX3 469 aa3.61□□□□□ -1.83
NF1-220ENST00000581113 U3KQV3 271 aa3.61□□□□□ -1.83
NF1-220ENST00000581113 ILVBLA1L0T0 632 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 TCP10L2B9ZVM9 353 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 SLC30A4O14863 429 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 XPO1O14980 1071 aaKnown RBP3.6□□□□□ -1.83
NF1-220ENST00000581113 CASC3O15234 703 aaKnown RBP3.6□□□□□ -1.83
NF1-220ENST00000581113 ACSL4O60488 711 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 RHBDL1O75783 438 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 CIB2O75838 187 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 YEATS4O95619 227 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 RALAP11233 206 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 SELEP16581 610 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 CAPN2P17655 700 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 ZNF10P21506 573 aaPredicted RBP3.6□□□□□ -1.83
NF1-220ENST00000581113 CALB2P22676 271 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 ACP1P24666 158 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 CHMLP26374 656 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 SHC1P29353 583 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 CCND3P30281 292 aaPredicted RBP3.6□□□□□ -1.83
NF1-220ENST00000581113 SRD5A2P31213 254 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 FEN1P39748 380 aaKnown RBP3.6□□□□□ -1.83
NF1-220ENST00000581113 GYG1P46976 350 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 ERVK-16P61578 105 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 LMO4P61968 165 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 CUL1Q13616 776 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 GIT2Q14161 759 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 MAPK11Q15759 364 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 LRRC23Q53EV4 343 aaPredicted RBP3.6□□□□□ -1.83
NF1-220ENST00000581113 SLC27A4Q6P1M0 643 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 C17orf107Q6ZR85 190 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 Q71RC1 249 aaPredicted RBP3.6□□□□□ -1.83
NF1-220ENST00000581113 TMCO2Q7Z6W1 182 aaPredicted RBP3.6□□□□□ -1.83
NF1-220ENST00000581113 CCDC65Q8IXS2 484 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 TDHQ8IZJ6 230 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 Q8N377 158 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 SMYD1Q8NB12 490 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 TMEM185AQ8NFB2 350 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 OR5M9Q8NGP3 310 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 OR8K3Q8NH51 312 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 NPRL2Q8WTW4 380 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 FAM46BQ96A09 425 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 C8orf76Q96K31 380 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 PANX3Q96QZ0 392 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 PRMT1Q99873 361 aaKnown RBP3.6□□□□□ -1.83
NF1-220ENST00000581113 LLPHQ9BRT6 129 aaKnown RBP3.6□□□□□ -1.83
NF1-220ENST00000581113 ATG101Q9BSB4 218 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 ZNF416Q9BWM5 594 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 IQCGQ9H095 443 aaKnown RBP3.6□□□□□ -1.83
NF1-220ENST00000581113 DEFB129Q9H1M3 183 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.6□□□□□ -1.83
NF1-220ENST00000581113 ZHX2Q9Y6X8 837 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 PAPPA2Q9BXP8 1791 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 IGHV3-20A0A0C4DH32 117 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 IGHV3-38A0A0C4DH36 116 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 ARHGAP42A6NI28 874 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 ZNF732B4DXR9 585 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 F8VZ95 297 aa3.6□□□□□ -1.83
NF1-220ENST00000581113 RRP8O43159 456 aaKnown RBP3.6□□□□□ -1.83
NF1-220ENST00000581113 RANBP6O60518 1105 aaKnown RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms