RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 TNFRSF21O75509 655 aa14.28□□□□□ -0.12
SS18-216ENST00000580751 PPM1BO75688 479 aa14.28□□□□□ -0.12
SS18-216ENST00000580751 PDE5AO76074 875 aa14.28□□□□□ -0.12
SS18-216ENST00000580751 NKX2-2O95096 273 aa14.28□□□□□ -0.12
SS18-216ENST00000580751 MAP3K8P41279 467 aa14.28□□□□□ -0.12
SS18-216ENST00000580751 KHKP50053 298 aa14.28□□□□□ -0.12
SS18-216ENST00000580751 ST13P50502 369 aaKnown RBP14.28□□□□□ -0.12
SS18-216ENST00000580751 RPP38P78345 283 aaKnown RBP14.28□□□□□ -0.12
SS18-216ENST00000580751 NFATC3Q12968 1075 aa14.28□□□□□ -0.12
SS18-216ENST00000580751 ELOAQ14241 798 aaKnown RBP14.28□□□□□ -0.12
SS18-216ENST00000580751 SELPLGQ14242 412 aa14.28□□□□□ -0.12
SS18-216ENST00000580751 NTRK2Q16620 822 aa14.28□□□□□ -0.12
SS18-216ENST00000580751 CYP51A1Q16850 503 aa14.28□□□□□ -0.12
SS18-216ENST00000580751 NADK2Q4G0N4 442 aa14.28□□□□□ -0.12
SS18-216ENST00000580751 ZNF766Q5HY98 468 aa14.28□□□□□ -0.12
SS18-216ENST00000580751 GCNT6Q5T4J0 391 aa14.28□□□□□ -0.12
SS18-216ENST00000580751 INTS11Q5TA45 600 aaKnown RBP14.28□□□□□ -0.12
SS18-216ENST00000580751 PRAMEF8Q5VWM4 474 aa14.28□□□□□ -0.12
SS18-216ENST00000580751 PRAMEF7Q5VXH5 474 aa14.28□□□□□ -0.12
SS18-216ENST00000580751 SPINK14Q6IE38 97 aa14.28□□□□□ -0.12
SS18-216ENST00000580751 CDC73Q6P1J9 531 aa14.28□□□□□ -0.12
SS18-216ENST00000580751 LYPD8Q6UX82 237 aa14.28□□□□□ -0.12
SS18-216ENST00000580751 WDR53Q7Z5U6 358 aaPredicted RBP14.28□□□□□ -0.12
SS18-216ENST00000580751 MICU2Q8IYU8 434 aa14.28□□□□□ -0.12
SS18-216ENST00000580751 PRR22Q8IZ63 422 aa14.28□□□□□ -0.12
SS18-216ENST00000580751 COX18Q8N8Q8 333 aa14.28□□□□□ -0.12
SS18-216ENST00000580751 C11orf65Q8NCR3 313 aa14.28□□□□□ -0.12
SS18-216ENST00000580751 FBXO30Q8TB52 745 aa14.28□□□□□ -0.12
SS18-216ENST00000580751 GPR151Q8TDV0 419 aa14.28□□□□□ -0.12
SS18-216ENST00000580751 OMA1Q96E52 524 aa14.28□□□□□ -0.12
SS18-216ENST00000580751 STACQ99469 402 aa14.28□□□□□ -0.12
SS18-216ENST00000580751 DUSP22Q9NRW4 184 aa14.28□□□□□ -0.12
SS18-216ENST00000580751 LIPT1Q9Y234 373 aa14.28□□□□□ -0.12
SS18-216ENST00000580751 PCDHGB3Q9Y5G1 929 aa14.28□□□□□ -0.12
SS18-216ENST00000580751 TMEM247A6NEH6 219 aa14.27□□□□□ -0.13
SS18-216ENST00000580751 AQP12BA6NM10 295 aa14.27□□□□□ -0.13
SS18-216ENST00000580751 EIF4E1BA6NMX2 242 aaKnown RBP14.27□□□□□ -0.13
SS18-216ENST00000580751 SP1P08047 785 aa14.27□□□□□ -0.13
SS18-216ENST00000580751 ACP2P11117 423 aa14.27□□□□□ -0.13
SS18-216ENST00000580751 MATN1P21941 496 aa14.27□□□□□ -0.13
SS18-216ENST00000580751 IL12BP29460 328 aa14.27□□□□□ -0.13
SS18-216ENST00000580751 GABRA3P34903 492 aa14.27□□□□□ -0.13
SS18-216ENST00000580751 CRATP43155 626 aa14.27□□□□□ -0.13
SS18-216ENST00000580751 PSMD4P55036 377 aaKnown RBP14.27□□□□□ -0.13
SS18-216ENST00000580751 DSTNP60981 165 aa14.27□□□□□ -0.13
SS18-216ENST00000580751 MRPS22P82650 360 aaKnown RBP14.27□□□□□ -0.13
SS18-216ENST00000580751 FLOT2Q14254 428 aa14.27□□□□□ -0.13
SS18-216ENST00000580751 INAQ16352 499 aa14.27□□□□□ -0.13
SS18-216ENST00000580751 DUSP5Q16690 384 aa14.27□□□□□ -0.13
SS18-216ENST00000580751 DECR1Q16698 335 aa14.27□□□□□ -0.13
SS18-216ENST00000580751 VMACQ2NL98 169 aa14.27□□□□□ -0.13
SS18-216ENST00000580751 EXOSC6Q5RKV6 272 aaKnown RBP14.27□□□□□ -0.13
SS18-216ENST00000580751 LCN8Q6JVE9 175 aa14.27□□□□□ -0.13
SS18-216ENST00000580751 SLC25A25Q6KCM7 469 aa14.27□□□□□ -0.13
SS18-216ENST00000580751 ANGPTL8Q6UXH0 198 aa14.27□□□□□ -0.13
SS18-216ENST00000580751 ZNF227Q86WZ6 799 aa14.27□□□□□ -0.13
SS18-216ENST00000580751 DHFR2Q86XF0 187 aa14.27□□□□□ -0.13
SS18-216ENST00000580751 RNF130Q86XS8 419 aa14.27□□□□□ -0.13
SS18-216ENST00000580751 AQP12AQ8IXF9 295 aa14.27□□□□□ -0.13
SS18-216ENST00000580751 CLEC4FQ8N1N0 589 aa14.27□□□□□ -0.13
SS18-216ENST00000580751 SLC16A11Q8NCK7 471 aa14.27□□□□□ -0.13
SS18-216ENST00000580751 PSD4Q8NDX1 1056 aa14.27□□□□□ -0.13
SS18-216ENST00000580751 ADAMTS15Q8TE58 950 aa14.27□□□□□ -0.13
SS18-216ENST00000580751 TMBIM1Q969X1 311 aa14.27□□□□□ -0.13
SS18-216ENST00000580751 SLC35A4Q96G79 324 aa14.27□□□□□ -0.13
SS18-216ENST00000580751 SCMH1Q96GD3 660 aa14.27□□□□□ -0.13
SS18-216ENST00000580751 C16orf58Q96GQ5 468 aa14.27□□□□□ -0.13
SS18-216ENST00000580751 SECISBP2Q96T21 854 aaKnown RBP14.27□□□□□ -0.13
SS18-216ENST00000580751 YIPF4Q9BSR8 244 aa14.27□□□□□ -0.13
SS18-216ENST00000580751 PIGUQ9H490 435 aa14.27□□□□□ -0.13
SS18-216ENST00000580751 A4GALTQ9NPC4 353 aa14.27□□□□□ -0.13
SS18-216ENST00000580751 CBLCQ9ULV8 474 aa14.27□□□□□ -0.13
SS18-216ENST00000580751 KLF13Q9Y2Y9 288 aaPredicted RBP14.27□□□□□ -0.13
SS18-216ENST00000580751 BSNQ9UPA5 3926 aa14.27□□□□□ -0.13
SS18-216ENST00000580751 OR6C70A6NIJ9 312 aa14.26□□□□□ -0.13
SS18-216ENST00000580751 NME2P1O60361 137 aa14.26□□□□□ -0.13
SS18-216ENST00000580751 REM1O75628 298 aa14.26□□□□□ -0.13
SS18-216ENST00000580751 AK1P00568 194 aa14.26□□□□□ -0.13
SS18-216ENST00000580751 GUSBP08236 651 aa14.26□□□□□ -0.13
SS18-216ENST00000580751 GGT1P19440 569 aa14.26□□□□□ -0.13
SS18-216ENST00000580751 NME2P22392 152 aa14.26□□□□□ -0.13
SS18-216ENST00000580751 PCGF2P35227 344 aa14.26□□□□□ -0.13
SS18-216ENST00000580751 PIGAP37287 484 aa14.26□□□□□ -0.13
SS18-216ENST00000580751 FBXW4P57775 412 aa14.26□□□□□ -0.13
SS18-216ENST00000580751 RIPK1Q13546 671 aa14.26□□□□□ -0.13
SS18-216ENST00000580751 EFR3AQ14156 821 aa14.26□□□□□ -0.13
SS18-216ENST00000580751 ADRM1Q16186 407 aa14.26□□□□□ -0.13
SS18-216ENST00000580751 PLEKHN1Q494U1 663 aaPredicted RBP14.26□□□□□ -0.13
SS18-216ENST00000580751 SOWAHCQ53LP3 525 aaPredicted RBP14.26□□□□□ -0.13
SS18-216ENST00000580751 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.26□□□□□ -0.13
SS18-216ENST00000580751 RPUSD3Q6P087 351 aaKnown RBP14.26□□□□□ -0.13
SS18-216ENST00000580751 NUP54Q7Z3B4 507 aa14.26□□□□□ -0.13
SS18-216ENST00000580751 MDGA2Q7Z553 956 aa14.26□□□□□ -0.13
SS18-216ENST00000580751 ZZZ3Q8IYH5 903 aa14.26□□□□□ -0.13
SS18-216ENST00000580751 EID3Q8N140 333 aa14.26□□□□□ -0.13
SS18-216ENST00000580751 RNF148Q8N7C7 305 aa14.26□□□□□ -0.13
SS18-216ENST00000580751 FAM98AQ8NCA5 519 aaKnown RBP14.26□□□□□ -0.13
SS18-216ENST00000580751 OR10G3Q8NGC4 313 aa14.26□□□□□ -0.13
SS18-216ENST00000580751 PAQR8Q8TEZ7 354 aa14.26□□□□□ -0.13
SS18-216ENST00000580751 PMM1Q92871 262 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms