RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 NEUROD4Q9HD90 331 aa13.5□□□□□ -0.25
SS18-212ENST00000579061 GIN1Q9NXP7 522 aa13.5□□□□□ -0.25
SS18-212ENST00000579061 PPP4R1LQ9P1A2 415 aa13.5□□□□□ -0.25
SS18-212ENST00000579061 A0A0G2JNJ9 132 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 GXYLT2A0PJZ3 443 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 C19orf84I3L1E1 186 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 SCO2O43819 266 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 TOXO94900 526 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 NGFRP08138 427 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 ACP2P11117 423 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 CPN1P15169 458 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 CHMP24386 653 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 TIMP3P35625 211 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 ADH7P40394 386 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 KIR3DL1P43629 444 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 DIO3P55073 304 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 GFRA1P56159 465 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 DSCR4P56555 118 aaPredicted RBP13.49□□□□□ -0.25
SS18-212ENST00000579061 MAGOHP61326 146 aaKnown RBP13.49□□□□□ -0.25
SS18-212ENST00000579061 TFF3Q07654 80 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 GANABQ14697 944 aaKnown RBP13.49□□□□□ -0.25
SS18-212ENST00000579061 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.49□□□□□ -0.25
SS18-212ENST00000579061 ACSF3Q4G176 576 aaPredicted RBP13.49□□□□□ -0.25
SS18-212ENST00000579061 NSUN5P2Q63ZY6 315 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 SZRD1Q7Z422 152 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 IFNEQ86WN2 208 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 LACC1Q8IV20 430 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 TRIM42Q8IWZ5 723 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 SLC16A11Q8NCK7 471 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 OR4K17Q8NGC6 315 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 OR56A1Q8NGH5 318 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 OR14L1PQ8NHC6 308 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 ZPLD1Q8TCW7 415 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 SFXN5Q8TD22 340 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 PIK3R3Q92569 461 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 SLC9A6Q92581 669 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 MOAP1Q96BY2 351 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 ZBTB9Q96C00 473 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 RMND5BQ96G75 393 aaPredicted RBP13.49□□□□□ -0.25
SS18-212ENST00000579061 STACQ99469 402 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 DUSP26Q9BV47 211 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 MEAF6Q9HAF1 191 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 DUSP22Q9NRW4 184 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 ZCCHC3Q9NUD5 404 aaKnown RBP13.49□□□□□ -0.25
SS18-212ENST00000579061 THAP1Q9NVV9 213 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 NKIRAS1Q9NYS0 192 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 TAS2R10Q9NYW0 307 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 Q9UFV3 132 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 DKKL1Q9UK85 242 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 FBXL2Q9UKC9 423 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 CAMK2AQ9UQM7 478 aa13.49□□□□□ -0.25
SS18-212ENST00000579061 IGLV3-32A0A0A0MS00 114 aa13.48□□□□□ -0.25
SS18-212ENST00000579061 CD8B2A6NJW9 211 aa13.48□□□□□ -0.25
SS18-212ENST00000579061 HSPB2A8KAH6 182 aa13.48□□□□□ -0.25
SS18-212ENST00000579061 SNNO75324 88 aaPredicted RBP13.48□□□□□ -0.25
SS18-212ENST00000579061 UTS2O95399 124 aa13.48□□□□□ -0.25
SS18-212ENST00000579061 C6orf47O95873 294 aa13.48□□□□□ -0.25
SS18-212ENST00000579061 IGKV1D-16P01601 117 aa13.48□□□□□ -0.25
SS18-212ENST00000579061 KRT16P08779 473 aa13.48□□□□□ -0.25
SS18-212ENST00000579061 ALOX5P09917 674 aa13.48□□□□□ -0.25
SS18-212ENST00000579061 LBPP18428 481 aa13.48□□□□□ -0.25
SS18-212ENST00000579061 EFNA1P20827 205 aaPredicted RBP13.48□□□□□ -0.25
SS18-212ENST00000579061 DPP4P27487 766 aa13.48□□□□□ -0.25
SS18-212ENST00000579061 CEACAM8P31997 349 aaPredicted RBP13.48□□□□□ -0.25
SS18-212ENST00000579061 CCT3P49368 545 aaKnown RBP13.48□□□□□ -0.25
SS18-212ENST00000579061 C17orf67Q0P5P2 114 aa13.48□□□□□ -0.25
SS18-212ENST00000579061 CASP8Q14790 479 aa13.48□□□□□ -0.25
SS18-212ENST00000579061 HSPB2Q16082 182 aa13.48□□□□□ -0.25
SS18-212ENST00000579061 DUSP5Q16690 384 aa13.48□□□□□ -0.25
SS18-212ENST00000579061 SLC25A35Q3KQZ1 300 aa13.48□□□□□ -0.25
SS18-212ENST00000579061 DCST1Q5T197 706 aa13.48□□□□□ -0.25
SS18-212ENST00000579061 AGBL2Q5U5Z8 902 aa13.48□□□□□ -0.25
SS18-212ENST00000579061 ATG16L1Q676U5 607 aa13.48□□□□□ -0.25
SS18-212ENST00000579061 OGFOD2Q6N063 350 aa13.48□□□□□ -0.25
SS18-212ENST00000579061 CDC73Q6P1J9 531 aa13.48□□□□□ -0.25
SS18-212ENST00000579061 AAGABQ6PD74 315 aa13.48□□□□□ -0.25
SS18-212ENST00000579061 SEM1Q6ZVN7 128 aa13.48□□□□□ -0.25
SS18-212ENST00000579061 MCEMP1Q8IX19 187 aa13.48□□□□□ -0.25
SS18-212ENST00000579061 OR2M3Q8NG83 312 aa13.48□□□□□ -0.25
SS18-212ENST00000579061 NUF2Q9BZD4 464 aa13.48□□□□□ -0.25
SS18-212ENST00000579061 DSN1Q9H410 356 aa13.48□□□□□ -0.25
SS18-212ENST00000579061 PTGES2Q9H7Z7 377 aa13.48□□□□□ -0.25
SS18-212ENST00000579061 CALHM2Q9HA72 323 aa13.48□□□□□ -0.25
SS18-212ENST00000579061 PNPOQ9NVS9 261 aa13.48□□□□□ -0.25
SS18-212ENST00000579061 FLRT3Q9NZU0 649 aa13.48□□□□□ -0.25
SS18-212ENST00000579061 APCP25054 2843 aa13.48□□□□□ -0.25
SS18-212ENST00000579061 FAM90A27PA6NNH2 459 aa13.47□□□□□ -0.25
SS18-212ENST00000579061 ALG1L2C9J202 215 aa13.47□□□□□ -0.25
SS18-212ENST00000579061 LINC01387J3KSC0 135 aa13.47□□□□□ -0.25
SS18-212ENST00000579061 ZIC3O60481 467 aa13.47□□□□□ -0.25
SS18-212ENST00000579061 KCNK2O95069 426 aa13.47□□□□□ -0.25
SS18-212ENST00000579061 IL2RAP01589 272 aa13.47□□□□□ -0.25
SS18-212ENST00000579061 HMGN2P05204 90 aaKnown RBP13.47□□□□□ -0.25
SS18-212ENST00000579061 IGFBP2P18065 325 aa13.47□□□□□ -0.25
SS18-212ENST00000579061 MSX1P28360 303 aa13.47□□□□□ -0.25
SS18-212ENST00000579061 RFX3P48380 749 aa13.47□□□□□ -0.25
SS18-212ENST00000579061 POU6F2P78424 691 aaPredicted RBP13.47□□□□□ -0.25
SS18-212ENST00000579061 RCAN2Q14206 197 aa13.47□□□□□ -0.25
SS18-212ENST00000579061 DPY19L1Q2PZI1 675 aa13.47□□□□□ -0.25
SS18-212ENST00000579061 GRAMD1BQ3KR37 738 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms