RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 SLC6A15Q9H2J7 730 aa17.62■□□□□ 0.41
SS18-208ENST00000577751 TCF7L2Q9NQB0 619 aa17.62■□□□□ 0.41
SS18-208ENST00000577751 ZIM2Q9NZV7 527 aa17.62■□□□□ 0.41
SS18-208ENST00000577751 SPRR3Q9UBC9 169 aa17.62■□□□□ 0.41
SS18-208ENST00000577751 FAF1Q9UNN5 650 aaPredicted RBP17.62■□□□□ 0.41
SS18-208ENST00000577751 C9JVG2 144 aa17.61■□□□□ 0.41
SS18-208ENST00000577751 BCKDKO14874 412 aa17.61■□□□□ 0.41
SS18-208ENST00000577751 ATP8B1O43520 1251 aa17.61■□□□□ 0.41
SS18-208ENST00000577751 SLC22A3O75751 556 aa17.61■□□□□ 0.41
SS18-208ENST00000577751 TRAPPC6AO75865 159 aa17.61■□□□□ 0.41
SS18-208ENST00000577751 UTS2O95399 124 aa17.61■□□□□ 0.41
SS18-208ENST00000577751 CPSF4O95639 269 aaKnown RBP17.61■□□□□ 0.41
SS18-208ENST00000577751 LCN1P31025 176 aa17.61■□□□□ 0.41
SS18-208ENST00000577751 SOAT1P35610 550 aa17.61■□□□□ 0.41
SS18-208ENST00000577751 RFX3P48380 749 aa17.61■□□□□ 0.41
SS18-208ENST00000577751 MRPL19P49406 292 aaKnown RBP17.61■□□□□ 0.41
SS18-208ENST00000577751 AQP5P55064 265 aa17.61■□□□□ 0.41
SS18-208ENST00000577751 POU6F2P78424 691 aaPredicted RBP17.61■□□□□ 0.41
SS18-208ENST00000577751 GXYLT1Q4G148 440 aa17.61■□□□□ 0.41
SS18-208ENST00000577751 MTFR2Q6P444 385 aa17.61■□□□□ 0.41
SS18-208ENST00000577751 FIGNL1Q6PIW4 674 aa17.61■□□□□ 0.41
SS18-208ENST00000577751 APOOLQ6UXV4 268 aa17.61■□□□□ 0.41
SS18-208ENST00000577751 CD163Q86VB7 1156 aa17.61■□□□□ 0.41
SS18-208ENST00000577751 CLEC4FQ8N1N0 589 aa17.61■□□□□ 0.41
SS18-208ENST00000577751 ADAMTS15Q8TE58 950 aa17.61■□□□□ 0.41
SS18-208ENST00000577751 JADE3Q92613 823 aa17.61■□□□□ 0.41
SS18-208ENST00000577751 CDS1Q92903 461 aa17.61■□□□□ 0.41
SS18-208ENST00000577751 SARAFQ96BY9 339 aa17.61■□□□□ 0.41
SS18-208ENST00000577751 DMRTA2Q96SC8 542 aa17.61■□□□□ 0.41
SS18-208ENST00000577751 ZBTB18Q99592 522 aa17.61■□□□□ 0.41
SS18-208ENST00000577751 SERHLQ9NQF3 203 aa17.61■□□□□ 0.41
SS18-208ENST00000577751 FBXO34Q9NWN3 711 aa17.61■□□□□ 0.41
SS18-208ENST00000577751 NCOA6Q14686 2063 aaPredicted RBP17.6■□□□□ 0.41
SS18-208ENST00000577751 RNF103-CHMP3A0A140T963 221 aa17.6■□□□□ 0.41
SS18-208ENST00000577751 E9PLN8 166 aa17.6■□□□□ 0.41
SS18-208ENST00000577751 POLR3GO15318 223 aaPredicted RBP17.6■□□□□ 0.41
SS18-208ENST00000577751 ZG16O60844 167 aa17.6■□□□□ 0.41
SS18-208ENST00000577751 EDF1O60869 148 aaKnown RBP17.6■□□□□ 0.41
SS18-208ENST00000577751 IL6P05231 212 aa17.6■□□□□ 0.41
SS18-208ENST00000577751 NGFRP08138 427 aa17.6■□□□□ 0.41
SS18-208ENST00000577751 UQCRC2P22695 453 aa17.6■□□□□ 0.41
SS18-208ENST00000577751 LRRC74AQ0VAA2 488 aa17.6■□□□□ 0.41
SS18-208ENST00000577751 GRAMD1BQ3KR37 738 aa17.6■□□□□ 0.41
SS18-208ENST00000577751 NHSL2Q5HYW2 709 aa17.6■□□□□ 0.41
SS18-208ENST00000577751 ZAR1Q86SH2 424 aa17.6■□□□□ 0.41
SS18-208ENST00000577751 FADS6Q8N9I5 356 aa17.6■□□□□ 0.41
SS18-208ENST00000577751 OR4C3Q8NH37 302 aa17.6■□□□□ 0.41
SS18-208ENST00000577751 MIPOL1Q8TD10 442 aa17.6■□□□□ 0.41
SS18-208ENST00000577751 PHF10Q8WUB8 498 aaKnown RBP17.6■□□□□ 0.41
SS18-208ENST00000577751 STON2Q8WXE9 905 aa17.6■□□□□ 0.41
SS18-208ENST00000577751 OR7D2Q96RA2 312 aa17.6■□□□□ 0.41
SS18-208ENST00000577751 OR52E6Q96RD3 313 aa17.6■□□□□ 0.41
SS18-208ENST00000577751 VKORC1Q9BQB6 163 aa17.6■□□□□ 0.41
SS18-208ENST00000577751 G6PC3Q9BUM1 346 aa17.6■□□□□ 0.41
SS18-208ENST00000577751 TP63Q9H3D4 680 aaPredicted RBP17.6■□□□□ 0.41
SS18-208ENST00000577751 SERHL2Q9H4I8 314 aa17.6■□□□□ 0.41
SS18-208ENST00000577751 EXO5Q9H790 373 aa17.6■□□□□ 0.41
SS18-208ENST00000577751 SDHAF3Q9NRP4 125 aa17.6■□□□□ 0.41
SS18-208ENST00000577751 PNPLA3Q9NST1 481 aa17.6■□□□□ 0.41
SS18-208ENST00000577751 TNFRSF10DQ9UBN6 386 aa17.6■□□□□ 0.41
SS18-208ENST00000577751 SUCOQ9UBS9 1254 aaKnown RBP17.6■□□□□ 0.41
SS18-208ENST00000577751 FBXL2Q9UKC9 423 aa17.6■□□□□ 0.41
SS18-208ENST00000577751 MRPS18CQ9Y3D5 142 aaKnown RBP17.6■□□□□ 0.41
SS18-208ENST00000577751 PCDHGB3Q9Y5G1 929 aa17.6■□□□□ 0.41
SS18-208ENST00000577751 KCNE3Q9Y6H6 103 aa17.6■□□□□ 0.41
SS18-208ENST00000577751 DOPEY1Q5JWR5 2465 aa17.6■□□□□ 0.41
SS18-208ENST00000577751 DUXAA6NLW8 204 aa17.59■□□□□ 0.41
SS18-208ENST00000577751 C17orf51A8MQB3 221 aa17.59■□□□□ 0.41
SS18-208ENST00000577751 SCO2O43819 266 aa17.59■□□□□ 0.41
SS18-208ENST00000577751 ESRRAP11474 423 aaPredicted RBP17.59■□□□□ 0.41
SS18-208ENST00000577751 TBXA2RP21731 343 aa17.59■□□□□ 0.41
SS18-208ENST00000577751 MATN1P21941 496 aa17.59■□□□□ 0.41
SS18-208ENST00000577751 TRPC1P48995 793 aa17.59■□□□□ 0.41
SS18-208ENST00000577751 CLK3P49761 638 aaKnown RBP17.59■□□□□ 0.41
SS18-208ENST00000577751 ADORA2A-AS1P86434 159 aa17.59■□□□□ 0.41
SS18-208ENST00000577751 EIPR1Q53HC9 387 aa17.59■□□□□ 0.41
SS18-208ENST00000577751 WIPI1Q5MNZ9 446 aaPredicted RBP17.59■□□□□ 0.41
SS18-208ENST00000577751 CCNJQ5T5M9 372 aa17.59■□□□□ 0.41
SS18-208ENST00000577751 SAXO2Q658L1 398 aa17.59■□□□□ 0.41
SS18-208ENST00000577751 OR5M10Q6IEU7 315 aa17.59■□□□□ 0.41
SS18-208ENST00000577751 C3P1Q6ZMU1 363 aa17.59■□□□□ 0.41
SS18-208ENST00000577751 GALNT10Q86SR1 603 aa17.59■□□□□ 0.41
SS18-208ENST00000577751 EID3Q8N140 333 aa17.59■□□□□ 0.41
SS18-208ENST00000577751 MIER2Q8N344 545 aa17.59■□□□□ 0.41
SS18-208ENST00000577751 ARFGAP2Q8N6H7 521 aa17.59■□□□□ 0.41
SS18-208ENST00000577751 FAM83FQ8NEG4 500 aaPredicted RBP17.59■□□□□ 0.41
SS18-208ENST00000577751 OR2B2Q9GZK3 357 aa17.59■□□□□ 0.41
SS18-208ENST00000577751 MED4Q9NPJ6 270 aa17.59■□□□□ 0.41
SS18-208ENST00000577751 PCNX3Q9H6A9 2034 aa17.59■□□□□ 0.41
SS18-208ENST00000577751 USP9YO00507 2555 aaPredicted RBP17.58■□□□□ 0.41
SS18-208ENST00000577751 ALG1L2C9J202 215 aa17.58■□□□□ 0.4
SS18-208ENST00000577751 OXSR1O95747 527 aaPredicted RBP17.58■□□□□ 0.4
SS18-208ENST00000577751 SRD5A2P31213 254 aa17.58■□□□□ 0.4
SS18-208ENST00000577751 CRYZQ08257 329 aaKnown RBP17.58■□□□□ 0.4
SS18-208ENST00000577751 TOMM20Q15388 145 aa17.58■□□□□ 0.4
SS18-208ENST00000577751 VASNQ6EMK4 673 aa17.58■□□□□ 0.4
SS18-208ENST00000577751 MARCH3Q86UD3 253 aa17.58■□□□□ 0.4
SS18-208ENST00000577751 OR2M3Q8NG83 312 aa17.58■□□□□ 0.4
SS18-208ENST00000577751 OR5D16Q8NGK9 328 aa17.58■□□□□ 0.4
SS18-208ENST00000577751 OR5M9Q8NGP3 310 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms