RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 DIO3P55073 304 aa1.47□□□□□ -2.17
TOP2A-202ENST00000577541 POLR2FP61218 127 aaKnown RBP1.47□□□□□ -2.17
TOP2A-202ENST00000577541 GABPB1Q06547 395 aaPredicted RBP1.47□□□□□ -2.17
TOP2A-202ENST00000577541 WASHC5Q12768 1159 aa1.47□□□□□ -2.17
TOP2A-202ENST00000577541 ZSWIM7Q19AV6 140 aa1.47□□□□□ -2.17
TOP2A-202ENST00000577541 ADPRMQ3LIE5 342 aa1.47□□□□□ -2.17
TOP2A-202ENST00000577541 CCDC92Q53HC0 331 aaPredicted RBP1.47□□□□□ -2.17
TOP2A-202ENST00000577541 NEK5Q6P3R8 708 aa1.47□□□□□ -2.17
TOP2A-202ENST00000577541 IL34Q6ZMJ4 242 aa1.47□□□□□ -2.17
TOP2A-202ENST00000577541 TGIF2LYQ8IUE0 185 aa1.47□□□□□ -2.17
TOP2A-202ENST00000577541 CADM2Q8N3J6 435 aa1.47□□□□□ -2.17
TOP2A-202ENST00000577541 LRRC17Q8N6Y2 441 aa1.47□□□□□ -2.17
TOP2A-202ENST00000577541 CCDC71LQ8N9Z2 235 aa1.47□□□□□ -2.17
TOP2A-202ENST00000577541 COLGALT1Q8NBJ5 622 aa1.47□□□□□ -2.17
TOP2A-202ENST00000577541 CNNM3Q8NE01 707 aa1.47□□□□□ -2.17
TOP2A-202ENST00000577541 PHYHIPQ92561 330 aa1.47□□□□□ -2.17
TOP2A-202ENST00000577541 DLX4Q92988 240 aaPredicted RBP1.47□□□□□ -2.17
TOP2A-202ENST00000577541 CCDC51Q96ER9 411 aa1.47□□□□□ -2.17
TOP2A-202ENST00000577541 FAM111AQ96PZ2 611 aa1.47□□□□□ -2.17
TOP2A-202ENST00000577541 PLEKHF1Q96S99 279 aa1.47□□□□□ -2.17
TOP2A-202ENST00000577541 CBWD1Q9BRT8 395 aa1.47□□□□□ -2.17
TOP2A-202ENST00000577541 FAM213AQ9BRX8 229 aa1.47□□□□□ -2.17
TOP2A-202ENST00000577541 SLC25A39Q9BZJ4 359 aaPredicted RBP1.47□□□□□ -2.17
TOP2A-202ENST00000577541 KRT23Q9C075 422 aa1.47□□□□□ -2.17
TOP2A-202ENST00000577541 ABCG8Q9H221 673 aa1.47□□□□□ -2.17
TOP2A-202ENST00000577541 ALG9Q9H6U8 611 aa1.47□□□□□ -2.17
TOP2A-202ENST00000577541 MBD2Q9UBB5 411 aa1.47□□□□□ -2.17
TOP2A-202ENST00000577541 NARFQ9UHQ1 456 aa1.47□□□□□ -2.17
TOP2A-202ENST00000577541 ABCC4O15439 1325 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 ATP8B3O60423 1300 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 TRBV2A0A0J9YWF9 115 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 RNF222A6NCQ9 220 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 NPIPA2E9PIF3 369 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 H0YL77 283 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 WWP2O00308 870 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 SDHDO14521 159 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 OR7A17O14581 309 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 EFNA2O43921 213 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 NME2P1O60361 137 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 SDC3O75056 442 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 WISP3O95389 354 aaPredicted RBP1.46□□□□□ -2.18
TOP2A-202ENST00000577541 MBD3O95983 291 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 IFNB1P01574 187 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 SEMG1P04279 462 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 PSG2P11465 335 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 FERP16591 822 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 IDSP22304 550 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 CCNE1P24864 410 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 MAPK3P27361 379 aaPredicted RBP1.46□□□□□ -2.18
TOP2A-202ENST00000577541 ACADSBP45954 432 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 SLC26A5P58743 744 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 ARF5P84085 180 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 OC90Q02509 493 aaPredicted RBP1.46□□□□□ -2.18
TOP2A-202ENST00000577541 PPP1R8Q12972 351 aaKnown RBP1.46□□□□□ -2.18
TOP2A-202ENST00000577541 EBI3Q14213 229 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 GAMTQ14353 236 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 TRADDQ15628 312 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 KYAT1Q16773 422 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 DCAF4L1Q3SXM0 396 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 LRIT3Q3SXY7 679 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 TFDP3Q5H9I0 405 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 ETFRF1Q6IPR1 90 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 GALNT17Q6IS24 598 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 PNCKQ6P2M8 343 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 SLC39A4Q6P5W5 647 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 UNC5DQ6UXZ4 953 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 CYS1Q717R9 158 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 TAF8Q7Z7C8 310 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 ERI1Q8IV48 349 aaKnown RBP1.46□□□□□ -2.18
TOP2A-202ENST00000577541 BATF2Q8N1L9 274 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 RNF148Q8N7C7 305 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 ZBTB44Q8NCP5 570 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 BBS1Q8NFJ9 593 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 OR52B4Q8NGK2 314 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 RFESDQ8TAC1 157 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 RSPH1Q8WYR4 309 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 LHX4Q969G2 390 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 ADIPOR1Q96A54 375 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 C18orf25Q96B23 403 aaPredicted RBP1.46□□□□□ -2.18
TOP2A-202ENST00000577541 CFAP36Q96G28 342 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 NAP1L3Q99457 506 aaPredicted RBP1.46□□□□□ -2.18
TOP2A-202ENST00000577541 SCRT1Q9BWW7 348 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 DDX47Q9H0S4 455 aaKnown RBP1.46□□□□□ -2.18
TOP2A-202ENST00000577541 C1orf21Q9H246 121 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 Q9H3A6 140 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 NGBQ9NPG2 151 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 MEPEQ9NQ76 525 aaPredicted RBP1.46□□□□□ -2.18
TOP2A-202ENST00000577541 YAE1D1Q9NRH1 226 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 ACTR3BQ9P1U1 418 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 SLC2A6Q9UGQ3 507 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 ODF2LQ9ULJ1 636 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 ZNF175Q9Y473 711 aa1.46□□□□□ -2.18
TOP2A-202ENST00000577541 CFAP65Q6ZU64 1925 aaKnown RBP1.45□□□□□ -2.18
TOP2A-202ENST00000577541 EI24O14681 340 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 CHADO15335 359 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 BUB1O43683 1085 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 B3GALNT1O75752 331 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 STK17BO94768 372 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 AKR7A3O95154 331 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 DIRAS3O95661 229 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms