RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 PTGR2Q8N8N7 351 aaPredicted RBP11.96□□□□□ -0.49
COPS3-214ENST00000577246 OR9A2Q8NGT5 310 aa11.96□□□□□ -0.49
COPS3-214ENST00000577246 SELENOMQ8WWX9 145 aa11.96□□□□□ -0.49
COPS3-214ENST00000577246 FAIMQ9NVQ4 179 aa11.96□□□□□ -0.49
COPS3-214ENST00000577246 FAM120CQ9NX05 1096 aaKnown RBP11.96□□□□□ -0.49
COPS3-214ENST00000577246 LIPT1Q9Y234 373 aa11.96□□□□□ -0.49
COPS3-214ENST00000577246 MED12Q93074 2177 aa11.96□□□□□ -0.5
COPS3-214ENST00000577246 A0A096LPK6 155 aa11.95□□□□□ -0.5
COPS3-214ENST00000577246 B4DXG7 233 aa11.95□□□□□ -0.5
COPS3-214ENST00000577246 STX16-NPEPL1H3BU86 382 aa11.95□□□□□ -0.5
COPS3-214ENST00000577246 HAX1O00165 279 aa11.95□□□□□ -0.5
COPS3-214ENST00000577246 EIF1AYO14602 144 aaKnown RBP11.95□□□□□ -0.5
COPS3-214ENST00000577246 STX16O14662 325 aa11.95□□□□□ -0.5
COPS3-214ENST00000577246 FADS1O60427 444 aa11.95□□□□□ -0.5
COPS3-214ENST00000577246 SMIM24O75264 130 aa11.95□□□□□ -0.5
COPS3-214ENST00000577246 SLITRK5O94991 958 aa11.95□□□□□ -0.5
COPS3-214ENST00000577246 OTCP00480 354 aa11.95□□□□□ -0.5
COPS3-214ENST00000577246 TUBBP07437 444 aa11.95□□□□□ -0.5
COPS3-214ENST00000577246 SOD3P08294 240 aa11.95□□□□□ -0.5
COPS3-214ENST00000577246 RBP1P09455 135 aa11.95□□□□□ -0.5
COPS3-214ENST00000577246 C17orf67Q0P5P2 114 aa11.95□□□□□ -0.5
COPS3-214ENST00000577246 ZNF155Q12901 538 aaPredicted RBP11.95□□□□□ -0.5
COPS3-214ENST00000577246 TRAF3Q13114 568 aa11.95□□□□□ -0.5
COPS3-214ENST00000577246 HEPACAMQ14CZ8 416 aa11.95□□□□□ -0.5
COPS3-214ENST00000577246 ZNHIT3Q15649 155 aaPredicted RBP11.95□□□□□ -0.5
COPS3-214ENST00000577246 NRF1Q16656 503 aa11.95□□□□□ -0.5
COPS3-214ENST00000577246 PDSS1Q5T2R2 415 aa11.95□□□□□ -0.5
COPS3-214ENST00000577246 MROH9Q5TGP6 573 aa11.95□□□□□ -0.5
COPS3-214ENST00000577246 ALKBH2Q6NS38 261 aa11.95□□□□□ -0.5
COPS3-214ENST00000577246 FAM180BQ6P0A1 224 aa11.95□□□□□ -0.5
COPS3-214ENST00000577246 DNAJC14Q6Y2X3 702 aaPredicted RBP11.95□□□□□ -0.5
COPS3-214ENST00000577246 FAM9CQ8IZT9 166 aa11.95□□□□□ -0.5
COPS3-214ENST00000577246 C1orf52Q8N6N3 182 aaKnown RBP11.95□□□□□ -0.5
COPS3-214ENST00000577246 OR5M1Q8NGP8 315 aa11.95□□□□□ -0.5
COPS3-214ENST00000577246 KAT2AQ92830 837 aa11.95□□□□□ -0.5
COPS3-214ENST00000577246 RHNO1Q9BSD3 238 aa11.95□□□□□ -0.5
COPS3-214ENST00000577246 TBL1XR1Q9BZK7 514 aa11.95□□□□□ -0.5
COPS3-214ENST00000577246 Q9N2J8 555 aa11.95□□□□□ -0.5
COPS3-214ENST00000577246 LPAR3Q9UBY5 353 aa11.95□□□□□ -0.5
COPS3-214ENST00000577246 MCM8Q9UJA3 840 aa11.95□□□□□ -0.5
COPS3-214ENST00000577246 PCTPQ9UKL6 214 aa11.95□□□□□ -0.5
COPS3-214ENST00000577246 CLEC4AQ9UMR7 237 aa11.95□□□□□ -0.5
COPS3-214ENST00000577246 MAGED1Q9Y5V3 778 aaPredicted RBP11.95□□□□□ -0.5
COPS3-214ENST00000577246 A0A087WZY1 265 aa11.94□□□□□ -0.5
COPS3-214ENST00000577246 C17orf51A8MQB3 221 aa11.94□□□□□ -0.5
COPS3-214ENST00000577246 ADAM11O75078 769 aa11.94□□□□□ -0.5
COPS3-214ENST00000577246 DANCRP0C864 163 aa11.94□□□□□ -0.5
COPS3-214ENST00000577246 PABPC4LP0CB38 370 aaKnown RBP11.94□□□□□ -0.5
COPS3-214ENST00000577246 HSD3B1P14060 373 aa11.94□□□□□ -0.5
COPS3-214ENST00000577246 ME2P23368 584 aa11.94□□□□□ -0.5
COPS3-214ENST00000577246 IL32P24001 234 aa11.94□□□□□ -0.5
COPS3-214ENST00000577246 HSD3B2P26439 372 aa11.94□□□□□ -0.5
COPS3-214ENST00000577246 TYK2P29597 1187 aa11.94□□□□□ -0.5
COPS3-214ENST00000577246 CDKN1AP38936 164 aa11.94□□□□□ -0.5
COPS3-214ENST00000577246 SLC6A8P48029 635 aa11.94□□□□□ -0.5
COPS3-214ENST00000577246 SERPINB8P50452 374 aa11.94□□□□□ -0.5
COPS3-214ENST00000577246 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.94□□□□□ -0.5
COPS3-214ENST00000577246 ZNF672Q499Z4 452 aaPredicted RBP11.94□□□□□ -0.5
COPS3-214ENST00000577246 SH2D4BQ5SQS7 431 aa11.94□□□□□ -0.5
COPS3-214ENST00000577246 NCMAPQ5T1S8 102 aa11.94□□□□□ -0.5
COPS3-214ENST00000577246 C6orf52Q5T4I8 152 aa11.94□□□□□ -0.5
COPS3-214ENST00000577246 LGSNQ5TDP6 509 aa11.94□□□□□ -0.5
COPS3-214ENST00000577246 GGNQ86UU5 652 aa11.94□□□□□ -0.5
COPS3-214ENST00000577246 CREG2Q8IUH2 290 aa11.94□□□□□ -0.5
COPS3-214ENST00000577246 OR4F6Q8NGB9 312 aa11.94□□□□□ -0.5
COPS3-214ENST00000577246 OR4N2Q8NGD1 307 aa11.94□□□□□ -0.5
COPS3-214ENST00000577246 OR10D3Q8NH80 312 aa11.94□□□□□ -0.5
COPS3-214ENST00000577246 RAB3IL1Q8TBN0 382 aa11.94□□□□□ -0.5
COPS3-214ENST00000577246 FBF1Q8TES7 1133 aa11.94□□□□□ -0.5
COPS3-214ENST00000577246 DUSP19Q8WTR2 217 aa11.94□□□□□ -0.5
COPS3-214ENST00000577246 HSD17B8Q92506 261 aa11.94□□□□□ -0.5
COPS3-214ENST00000577246 EXOSC8Q96B26 276 aaKnown RBP11.94□□□□□ -0.5
COPS3-214ENST00000577246 S100PBPQ96BU1 408 aa11.94□□□□□ -0.5
COPS3-214ENST00000577246 PHF21BQ96EK2 531 aa11.94□□□□□ -0.5
COPS3-214ENST00000577246 C11orf24Q96F05 449 aaPredicted RBP11.94□□□□□ -0.5
COPS3-214ENST00000577246 ERP44Q9BS26 406 aa11.94□□□□□ -0.5
COPS3-214ENST00000577246 BEX2Q9BXY8 128 aa11.94□□□□□ -0.5
COPS3-214ENST00000577246 GRIP2Q9C0E4 1043 aa11.94□□□□□ -0.5
COPS3-214ENST00000577246 ANKRA2Q9H9E1 313 aa11.94□□□□□ -0.5
COPS3-214ENST00000577246 TMEM160Q9NX00 188 aa11.94□□□□□ -0.5
COPS3-214ENST00000577246 VPS29Q9UBQ0 182 aa11.94□□□□□ -0.5
COPS3-214ENST00000577246 SONP18583 2426 aaKnown RBP11.94□□□□□ -0.5
COPS3-214ENST00000577246 IGLV3-32A0A0A0MS00 114 aa11.93□□□□□ -0.5
COPS3-214ENST00000577246 GNG14A0A1W2PPG7 69 aa11.93□□□□□ -0.5
COPS3-214ENST00000577246 FAM187AA6NFU0 413 aa11.93□□□□□ -0.5
COPS3-214ENST00000577246 PDYNP01213 254 aa11.93□□□□□ -0.5
COPS3-214ENST00000577246 IGHV4-39P01824 125 aa11.93□□□□□ -0.5
COPS3-214ENST00000577246 THBS2P35442 1172 aa11.93□□□□□ -0.5
COPS3-214ENST00000577246 GSTM5P46439 218 aa11.93□□□□□ -0.5
COPS3-214ENST00000577246 DSCR9P59020 149 aa11.93□□□□□ -0.5
COPS3-214ENST00000577246 PSG6Q00889 435 aa11.93□□□□□ -0.5
COPS3-214ENST00000577246 CAV1Q03135 178 aa11.93□□□□□ -0.5
COPS3-214ENST00000577246 ZNF844Q08AG5 666 aa11.93□□□□□ -0.5
COPS3-214ENST00000577246 FAPQ12884 760 aa11.93□□□□□ -0.5
COPS3-214ENST00000577246 TMEM44Q2T9K0 475 aa11.93□□□□□ -0.5
COPS3-214ENST00000577246 CTU2Q2VPK5 515 aaKnown RBP11.93□□□□□ -0.5
COPS3-214ENST00000577246 TECRLQ5HYJ1 363 aa11.93□□□□□ -0.5
COPS3-214ENST00000577246 DNM1P46Q6ZS02 220 aa11.93□□□□□ -0.5
COPS3-214ENST00000577246 ESPNLQ6ZVH7 1005 aa11.93□□□□□ -0.5
COPS3-214ENST00000577246 SSX8Q7RTT4 187 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms