RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 GMPPAQ96IJ6 420 aaPredicted RBP9.03□□□□□ -0.96
NPLOC4-220ENST00000576940 RHNO1Q9BSD3 238 aa9.03□□□□□ -0.96
NPLOC4-220ENST00000576940 TACO1Q9BSH4 297 aaKnown RBP9.03□□□□□ -0.96
NPLOC4-220ENST00000576940 PTGES2Q9H7Z7 377 aa9.03□□□□□ -0.96
NPLOC4-220ENST00000576940 ZBTB26Q9HCK0 441 aa9.03□□□□□ -0.96
NPLOC4-220ENST00000576940 PFDN4Q9NQP4 134 aa9.03□□□□□ -0.96
NPLOC4-220ENST00000576940 FBXO34Q9NWN3 711 aa9.03□□□□□ -0.96
NPLOC4-220ENST00000576940 WHRNQ9P202 907 aa9.03□□□□□ -0.96
NPLOC4-220ENST00000576940 CPSF2Q9P2I0 782 aaKnown RBP9.03□□□□□ -0.96
NPLOC4-220ENST00000576940 CDC42EP3Q9UKI2 254 aa9.03□□□□□ -0.96
NPLOC4-220ENST00000576940 SLC12A4Q9UP95 1085 aa9.03□□□□□ -0.96
NPLOC4-220ENST00000576940 OR10H1Q9Y4A9 318 aa9.03□□□□□ -0.96
NPLOC4-220ENST00000576940 AP4B1Q9Y6B7 739 aa9.03□□□□□ -0.96
NPLOC4-220ENST00000576940 A0A096LNT2 108 aa9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 DPRXA6NFQ7 191 aa9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 PPP6CO00743 305 aa9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 WIPF1O43516 503 aa9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 CXCL13O43927 109 aa9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 RAMP1O60894 148 aa9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 ESRRBO95718 433 aa9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 PDYNP01213 254 aa9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 C2P06681 752 aa9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 FCGR2AP12318 317 aa9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 PSMB1P20618 241 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 CCNG1P51959 295 aa9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 PSG6Q00889 435 aa9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 TAB1Q15750 504 aa9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 TMEM249Q2WGJ8 235 aa9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 ZNF672Q499Z4 452 aaPredicted RBP9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 CYS1Q717R9 158 aa9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 CEP112Q8N8E3 955 aa9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 PTGR2Q8N8N7 351 aaPredicted RBP9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 OR7G2Q8NG99 324 aa9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 OR10D3Q8NH80 312 aa9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 ZNF675Q8TD23 568 aa9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 EXOSC8Q96B26 276 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 PHF21BQ96EK2 531 aa9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 C11orf24Q96F05 449 aaPredicted RBP9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 HS6ST2Q96MM7 605 aa9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 NSUN5Q96P11 429 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 GPR78Q96P69 363 aa9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 TNFRSF13CQ96RJ3 184 aa9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 NPAS1Q99742 590 aa9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 TRAF4Q9BUZ4 470 aaPredicted RBP9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 ESRP2Q9H6T0 727 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 FANCFQ9NPI8 374 aa9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 SDHAF3Q9NRP4 125 aa9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 CISD1Q9NZ45 108 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 B3GALT5Q9Y2C3 310 aa9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 TNPO3Q9Y5L0 923 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 CADP27708 2225 aa9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 YLPM1P49750 1951 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-220ENST00000576940 GCM2O75603 506 aaPredicted RBP9.01□□□□□ -0.97
NPLOC4-220ENST00000576940 RFX3P48380 749 aa9.01□□□□□ -0.97
NPLOC4-220ENST00000576940 MRPS22P82650 360 aaKnown RBP9.01□□□□□ -0.97
NPLOC4-220ENST00000576940 BSPH1Q075Z2 132 aa9.01□□□□□ -0.97
NPLOC4-220ENST00000576940 IFT88Q13099 833 aa9.01□□□□□ -0.97
NPLOC4-220ENST00000576940 TRAF3Q13114 568 aa9.01□□□□□ -0.97
NPLOC4-220ENST00000576940 GANABQ14697 944 aaKnown RBP9.01□□□□□ -0.97
NPLOC4-220ENST00000576940 ACAP2Q15057 778 aa9.01□□□□□ -0.97
NPLOC4-220ENST00000576940 FAM83EQ2M2I3 478 aa9.01□□□□□ -0.97
NPLOC4-220ENST00000576940 TMEM44Q2T9K0 475 aa9.01□□□□□ -0.97
NPLOC4-220ENST00000576940 GLYR1Q49A26 553 aaPredicted RBP9.01□□□□□ -0.97
NPLOC4-220ENST00000576940 FIGNL1Q6PIW4 674 aa9.01□□□□□ -0.97
NPLOC4-220ENST00000576940 APOOLQ6UXV4 268 aa9.01□□□□□ -0.97
NPLOC4-220ENST00000576940 RPS27LQ71UM5 84 aaKnown RBP9.01□□□□□ -0.97
NPLOC4-220ENST00000576940 NUFIP2Q7Z417 695 aaKnown RBP9.01□□□□□ -0.97
NPLOC4-220ENST00000576940 GALNT10Q86SR1 603 aa9.01□□□□□ -0.97
NPLOC4-220ENST00000576940 STK32CQ86UX6 486 aa9.01□□□□□ -0.97
NPLOC4-220ENST00000576940 C1orf52Q8N6N3 182 aaKnown RBP9.01□□□□□ -0.97
NPLOC4-220ENST00000576940 STEAP2Q8NFT2 490 aa9.01□□□□□ -0.97
NPLOC4-220ENST00000576940 OR10H5Q8NGA6 315 aa9.01□□□□□ -0.97
NPLOC4-220ENST00000576940 OR4F6Q8NGB9 312 aa9.01□□□□□ -0.97
NPLOC4-220ENST00000576940 SELENOMQ8WWX9 145 aa9.01□□□□□ -0.97
NPLOC4-220ENST00000576940 ROBO4Q8WZ75 1007 aa9.01□□□□□ -0.97
NPLOC4-220ENST00000576940 HTRA1Q92743 480 aa9.01□□□□□ -0.97
NPLOC4-220ENST00000576940 MTBPQ96DY7 904 aa9.01□□□□□ -0.97
NPLOC4-220ENST00000576940 MRRFQ96E11 262 aaKnown RBP9.01□□□□□ -0.97
NPLOC4-220ENST00000576940 ADGRG7Q96K78 797 aa9.01□□□□□ -0.97
NPLOC4-220ENST00000576940 HBEGFQ99075 208 aa9.01□□□□□ -0.97
NPLOC4-220ENST00000576940 FAIM2Q9BWQ8 316 aa9.01□□□□□ -0.97
NPLOC4-220ENST00000576940 TRIM2Q9C040 744 aa9.01□□□□□ -0.97
NPLOC4-220ENST00000576940 OR10A4Q9H209 315 aa9.01□□□□□ -0.97
NPLOC4-220ENST00000576940 ELOVL6Q9H5J4 265 aa9.01□□□□□ -0.97
NPLOC4-220ENST00000576940 RRAGDQ9NQL2 400 aaPredicted RBP9.01□□□□□ -0.97
NPLOC4-220ENST00000576940 RNF14Q9UBS8 474 aa9.01□□□□□ -0.97
NPLOC4-220ENST00000576940 PYCARDQ9ULZ3 195 aa9.01□□□□□ -0.97
NPLOC4-220ENST00000576940 VDAC3Q9Y277 283 aa9.01□□□□□ -0.97
NPLOC4-220ENST00000576940 FREM1Q5H8C1 2179 aa9□□□□□ -0.97
NPLOC4-220ENST00000576940 A0A0J9YW62 118 aa9□□□□□ -0.97
NPLOC4-220ENST00000576940 HMX2A2RU54 273 aa9□□□□□ -0.97
NPLOC4-220ENST00000576940 TNFSF11O14788 317 aa9□□□□□ -0.97
NPLOC4-220ENST00000576940 ZSCAN12O43309 604 aa9□□□□□ -0.97
NPLOC4-220ENST00000576940 KLHL2O95198 593 aa9□□□□□ -0.97
NPLOC4-220ENST00000576940 ANGPTL1O95841 491 aa9□□□□□ -0.97
NPLOC4-220ENST00000576940 IL3P08700 152 aa9□□□□□ -0.97
NPLOC4-220ENST00000576940 TSPAN8P19075 237 aa9□□□□□ -0.97
NPLOC4-220ENST00000576940 ADH6P28332 368 aa9□□□□□ -0.97
NPLOC4-220ENST00000576940 C21orf58P58505 322 aa9□□□□□ -0.97
NPLOC4-220ENST00000576940 PRSS53Q2L4Q9 553 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms