RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 ICE1Q9Y2F5 2266 aa21.42■■□□□ 1.02
SNF8-217ENST00000576353 ZNF407Q9C0G0 2248 aa21.41■■□□□ 1.02
SNF8-217ENST00000576353 E9PBE3 544 aa21.41■■□□□ 1.02
SNF8-217ENST00000576353 SCO2O43819 266 aa21.41■■□□□ 1.02
SNF8-217ENST00000576353 UTS2O95399 124 aa21.41■■□□□ 1.02
SNF8-217ENST00000576353 GABRA1P14867 456 aa21.41■■□□□ 1.02
SNF8-217ENST00000576353 LCN1P31025 176 aa21.41■■□□□ 1.02
SNF8-217ENST00000576353 S100A3P33764 101 aa21.41■■□□□ 1.02
SNF8-217ENST00000576353 WNT3P56703 355 aa21.41■■□□□ 1.02
SNF8-217ENST00000576353 EIPR1Q53HC9 387 aa21.41■■□□□ 1.02
SNF8-217ENST00000576353 WIPI1Q5MNZ9 446 aaPredicted RBP21.41■■□□□ 1.02
SNF8-217ENST00000576353 CDC73Q6P1J9 531 aa21.41■■□□□ 1.02
SNF8-217ENST00000576353 ACAD11Q709F0 780 aa21.41■■□□□ 1.02
SNF8-217ENST00000576353 FAM83FQ8NEG4 500 aaPredicted RBP21.41■■□□□ 1.02
SNF8-217ENST00000576353 FAM110BQ8TC76 370 aa21.41■■□□□ 1.02
SNF8-217ENST00000576353 G6PC3Q9BUM1 346 aa21.41■■□□□ 1.02
SNF8-217ENST00000576353 BTBD2Q9BX70 525 aa21.41■■□□□ 1.02
SNF8-217ENST00000576353 PIGUQ9H490 435 aa21.41■■□□□ 1.02
SNF8-217ENST00000576353 HHATLQ9HCP6 504 aa21.41■■□□□ 1.02
SNF8-217ENST00000576353 ALKBH4Q9NXW9 302 aa21.41■■□□□ 1.02
SNF8-217ENST00000576353 PPP4R1LQ9P1A2 415 aa21.41■■□□□ 1.02
SNF8-217ENST00000576353 GPR45Q9Y5Y3 372 aa21.41■■□□□ 1.02
SNF8-217ENST00000576353 EXPH5Q8NEV8 1989 aa21.41■■□□□ 1.02
SNF8-217ENST00000576353 KCNK2O95069 426 aa21.4■■□□□ 1.02
SNF8-217ENST00000576353 IGKV1D-16P01601 117 aa21.4■■□□□ 1.02
SNF8-217ENST00000576353 IDO1P14902 403 aa21.4■■□□□ 1.02
SNF8-217ENST00000576353 SRD5A2P31213 254 aa21.4■■□□□ 1.02
SNF8-217ENST00000576353 SOAT1P35610 550 aa21.4■■□□□ 1.02
SNF8-217ENST00000576353 POU6F2P78424 691 aaPredicted RBP21.4■■□□□ 1.02
SNF8-217ENST00000576353 CPEB4Q17RY0 729 aaKnown RBP eCLIP21.4■■□□□ 1.02
SNF8-217ENST00000576353 SLC9B1Q4ZJI4 515 aa21.4■■□□□ 1.02
SNF8-217ENST00000576353 NHSL2Q5HYW2 709 aa21.4■■□□□ 1.02
SNF8-217ENST00000576353 VASNQ6EMK4 673 aa21.4■■□□□ 1.02
SNF8-217ENST00000576353 OR5M10Q6IEU7 315 aa21.4■■□□□ 1.02
SNF8-217ENST00000576353 YRDCQ86U90 279 aaKnown RBP21.4■■□□□ 1.02
SNF8-217ENST00000576353 CLECL1Q8IZS7 167 aa21.4■■□□□ 1.02
SNF8-217ENST00000576353 OR4K17Q8NGC6 315 aa21.4■■□□□ 1.02
SNF8-217ENST00000576353 OR4A15Q8NGL6 344 aa21.4■■□□□ 1.02
SNF8-217ENST00000576353 OR14L1PQ8NHC6 308 aa21.4■■□□□ 1.02
SNF8-217ENST00000576353 ADAMTS15Q8TE58 950 aa21.4■■□□□ 1.02
SNF8-217ENST00000576353 ZBTB18Q99592 522 aa21.4■■□□□ 1.02
SNF8-217ENST00000576353 TBL1XR1Q9BZK7 514 aa21.4■■□□□ 1.02
SNF8-217ENST00000576353 OR2B2Q9GZK3 357 aa21.4■■□□□ 1.02
SNF8-217ENST00000576353 GPATCH2Q9NW75 528 aa21.4■■□□□ 1.02
SNF8-217ENST00000576353 COQ3Q9NZJ6 369 aa21.4■■□□□ 1.02
SNF8-217ENST00000576353 FLRT3Q9NZU0 649 aa21.4■■□□□ 1.02
SNF8-217ENST00000576353 MRPS18CQ9Y3D5 142 aaKnown RBP21.4■■□□□ 1.02
SNF8-217ENST00000576353 USH1CQ9Y6N9 552 aa21.4■■□□□ 1.02
SNF8-217ENST00000576353 ZNF195O14628 629 aa21.39■■□□□ 1.01
SNF8-217ENST00000576353 SCN2BO60939 215 aa21.39■■□□□ 1.01
SNF8-217ENST00000576353 SASH3O75995 380 aa21.39■■□□□ 1.01
SNF8-217ENST00000576353 PTGER4P35408 488 aa21.39■■□□□ 1.01
SNF8-217ENST00000576353 NME5P56597 212 aa21.39■■□□□ 1.01
SNF8-217ENST00000576353 UFM1P61960 85 aa21.39■■□□□ 1.01
SNF8-217ENST00000576353 CRYZQ08257 329 aaKnown RBP21.39■■□□□ 1.01
SNF8-217ENST00000576353 FAM174BQ3ZCQ3 159 aa21.39■■□□□ 1.01
SNF8-217ENST00000576353 SPANXN4Q5MJ08 99 aa21.39■■□□□ 1.01
SNF8-217ENST00000576353 FIGNL1Q6PIW4 674 aa21.39■■□□□ 1.01
SNF8-217ENST00000576353 B3GNT6Q6ZMB0 384 aa21.39■■□□□ 1.01
SNF8-217ENST00000576353 NCCRP1Q6ZVX7 275 aaPredicted RBP21.39■■□□□ 1.01
SNF8-217ENST00000576353 MAVSQ7Z434 540 aa21.39■■□□□ 1.01
SNF8-217ENST00000576353 PM20D2Q8IYS1 436 aa21.39■■□□□ 1.01
SNF8-217ENST00000576353 GLB1L3Q8NCI6 653 aaPredicted RBP21.39■■□□□ 1.01
SNF8-217ENST00000576353 RND1Q92730 232 aa21.39■■□□□ 1.01
SNF8-217ENST00000576353 TIMP4Q99727 224 aa21.39■■□□□ 1.01
SNF8-217ENST00000576353 TAS2R10Q9NYW0 307 aa21.39■■□□□ 1.01
SNF8-217ENST00000576353 FBXL2Q9UKC9 423 aa21.39■■□□□ 1.01
SNF8-217ENST00000576353 SLC6A5Q9Y345 797 aa21.39■■□□□ 1.01
SNF8-217ENST00000576353 KLF2Q9Y5W3 355 aaPredicted RBP21.39■■□□□ 1.01
SNF8-217ENST00000576353 DIAPH2O60879 1101 aa21.38■■□□□ 1.01
SNF8-217ENST00000576353 TGDSO95455 350 aa21.38■■□□□ 1.01
SNF8-217ENST00000576353 ACTL6AO96019 429 aa21.38■■□□□ 1.01
SNF8-217ENST00000576353 NGFRP08138 427 aa21.38■■□□□ 1.01
SNF8-217ENST00000576353 PHC1P78364 1004 aa21.38■■□□□ 1.01
SNF8-217ENST00000576353 PMPCAQ10713 525 aa21.38■■□□□ 1.01
SNF8-217ENST00000576353 SF3B4Q15427 424 aaKnown RBP eCLIP21.38■■□□□ 1.011e-7■■■■■ 28.4
SNF8-217ENST00000576353 GSTA3Q16772 222 aa21.38■■□□□ 1.01
SNF8-217ENST00000576353 GRAMD1BQ3KR37 738 aa21.38■■□□□ 1.01
SNF8-217ENST00000576353 MARCH3Q86UD3 253 aa21.38■■□□□ 1.01
SNF8-217ENST00000576353 MARVELD2Q8N4S9 558 aa21.38■■□□□ 1.01
SNF8-217ENST00000576353 OR5AK3PQ8NH89 298 aa21.38■■□□□ 1.01
SNF8-217ENST00000576353 DUSP19Q8WTR2 217 aa21.38■■□□□ 1.01
SNF8-217ENST00000576353 CDS1Q92903 461 aa21.38■■□□□ 1.01
SNF8-217ENST00000576353 ABTB1Q969K4 478 aaPredicted RBP21.38■■□□□ 1.01
SNF8-217ENST00000576353 OTUB1Q96FW1 271 aaPredicted RBP21.38■■□□□ 1.01
SNF8-217ENST00000576353 TEX37Q96LM6 180 aa21.38■■□□□ 1.01
SNF8-217ENST00000576353 DKKL1Q9UK85 242 aa21.38■■□□□ 1.01
SNF8-217ENST00000576353 DNAJC13O75165 2243 aa21.38■■□□□ 1.01
SNF8-217ENST00000576353 DUXAA6NLW8 204 aa21.37■■□□□ 1.01
SNF8-217ENST00000576353 AHRRA9YTQ3 701 aa21.37■■□□□ 1.01
SNF8-217ENST00000576353 UBDO15205 165 aa21.37■■□□□ 1.01
SNF8-217ENST00000576353 CPSF4O95639 269 aaKnown RBP21.37■■□□□ 1.01
SNF8-217ENST00000576353 HPGDP15428 266 aa21.37■■□□□ 1.01
SNF8-217ENST00000576353 BMP7P18075 431 aa21.37■■□□□ 1.01
SNF8-217ENST00000576353 TBXA2RP21731 343 aa21.37■■□□□ 1.01
SNF8-217ENST00000576353 DSCR4P56555 118 aaPredicted RBP21.37■■□□□ 1.01
SNF8-217ENST00000576353 C17orf67Q0P5P2 114 aa21.37■■□□□ 1.01
SNF8-217ENST00000576353 LRRC74AQ0VAA2 488 aa21.37■■□□□ 1.01
SNF8-217ENST00000576353 PDCD4Q53EL6 469 aaKnown RBP21.37■■□□□ 1.01
SNF8-217ENST00000576353 C1orf185Q5T7R7 199 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms