RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 MST1P26927 711 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 GDF1P27539 372 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 ADSLP30566 484 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 GCKP35557 465 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 CDKN2CP42773 168 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 RPS26P62854 115 aaKnown RBP11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 HPCAP84074 193 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 SF3A3Q12874 501 aaKnown RBP eCLIP11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 RNFT1Q5M7Z0 435 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 TIGD3Q6B0B8 471 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 FIGNL1Q6PIW4 674 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 DNAJC14Q6Y2X3 702 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 SPATA21Q7Z572 469 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 RNF130Q86XS8 419 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 SIAH3Q8IW03 269 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 CLEC4FQ8N1N0 589 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 TMEM251Q8N6I4 163 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 OR5D16Q8NGK9 328 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 C10orf82Q8WW14 230 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 XAGE5Q8WWM1 108 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 GTF2H4Q92759 462 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 OTUB1Q96FW1 271 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 FAM107BQ9H098 131 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 TSPAN10Q9H1Z9 355 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 ZNF385DQ9H6B1 395 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 LDAHQ9H6V9 325 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 ZDHHC11Q9H8X9 412 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 TPT1P8Q9HAU6 139 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 PROK2Q9HC23 129 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 UBQLN4Q9NRR5 601 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 PPP4R1LQ9P1A2 415 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 LEF1Q9UJU2 399 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 CORO2BQ9UQ03 480 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 NDUFAF1Q9Y375 327 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 ZNF407Q9C0G0 2248 aa11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 H3BNH8 94 aa11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 GNB5O14775 395 aa11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 SLC22A2O15244 555 aa11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 SCO2O43819 266 aa11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 FADS1O60427 444 aa11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 STX11O75558 287 aa11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 IGKV1D-16P01601 117 aa11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 SNRPB2P08579 225 aaKnown RBP11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 ENDOUP21128 410 aaKnown RBP11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 TBXA2RP21731 343 aa11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 GNLYP22749 145 aa11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 CRATP43155 626 aa11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 MAGEA5P43359 124 aa11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 SEC24CP53992 1094 aa11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 GYS2P54840 703 aa11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 CASP6P55212 293 aa11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 KCNC4Q03721 635 aa11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 C17orf67Q0P5P2 114 aa11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 TOMM20Q15388 145 aa11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 GRAMD1BQ3KR37 738 aa11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 ARHGAP11BQ3KRB8 267 aa11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 FLYWCH1Q4VC44 716 aa11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 CMPK2Q5EBM0 449 aa11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 CCNJQ5T5M9 372 aa11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 DESI1Q6ICB0 168 aa11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 ARHGAP11AQ6P4F7 1023 aa11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 TNFAIP8L2Q6P589 184 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 SLC2A7Q6PXP3 512 aa11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 PLCZ1Q86YW0 608 aa11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 MISPQ8IVT2 679 aa11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 CHDHQ8NE62 594 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 OR52N2Q8NGI0 321 aa11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 ZFP90Q8TF47 636 aa11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 ELAC2Q9BQ52 826 aaKnown RBP11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 DEFB127Q9H1M4 99 aa11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 EXO5Q9H790 373 aa11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 ZNF703Q9H7S9 590 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 PTGES2Q9H7Z7 377 aa11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 GALNT9Q9HCQ5 603 aa11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 POLE3Q9NRF9 147 aa11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 LIPT1Q9Y234 373 aa11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 C15orf41Q9Y2V0 281 aa11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 PCDHB14Q9Y5E9 798 aa11.67□□□□□ -0.54
TRAPPC1-206ENST00000573989 NCKAP5O14513 1909 aa11.66□□□□□ -0.54
TRAPPC1-206ENST00000573989 A0A1W2PQD3 144 aa11.66□□□□□ -0.54
TRAPPC1-206ENST00000573989 LRRC3CA6NJW4 275 aa11.66□□□□□ -0.54
TRAPPC1-206ENST00000573989 ALG1L2C9J202 215 aa11.66□□□□□ -0.54
TRAPPC1-206ENST00000573989 NDUFB5O43674 189 aa11.66□□□□□ -0.54
TRAPPC1-206ENST00000573989 SUSD5O60279 629 aa11.66□□□□□ -0.54
TRAPPC1-206ENST00000573989 HCN1O60741 890 aa11.66□□□□□ -0.54
TRAPPC1-206ENST00000573989 TRAPPC6AO75865 159 aa11.66□□□□□ -0.54
TRAPPC1-206ENST00000573989 OXSR1O95747 527 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC1-206ENST00000573989 GUSBP08236 651 aa11.66□□□□□ -0.54
TRAPPC1-206ENST00000573989 ABOP16442 354 aa11.66□□□□□ -0.54
TRAPPC1-206ENST00000573989 CAPN3P20807 821 aa11.66□□□□□ -0.54
TRAPPC1-206ENST00000573989 PTGDSP41222 190 aa11.66□□□□□ -0.54
TRAPPC1-206ENST00000573989 FADDQ13158 208 aa11.66□□□□□ -0.54
TRAPPC1-206ENST00000573989 MRPL49Q13405 166 aaKnown RBP11.66□□□□□ -0.54
TRAPPC1-206ENST00000573989 GNA13Q14344 377 aa11.66□□□□□ -0.54
TRAPPC1-206ENST00000573989 MMEL1Q495T6 779 aa11.66□□□□□ -0.54
TRAPPC1-206ENST00000573989 LRIF1Q5T3J3 769 aa11.66□□□□□ -0.54
TRAPPC1-206ENST00000573989 HEPHL1Q6MZM0 1159 aa11.66□□□□□ -0.54
TRAPPC1-206ENST00000573989 GALNT10Q86SR1 603 aa11.66□□□□□ -0.54
TRAPPC1-206ENST00000573989 EID3Q8N140 333 aa11.66□□□□□ -0.54
TRAPPC1-206ENST00000573989 OR4K17Q8NGC6 315 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms