RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 RNF113BQ8IZP6 322 aaKnown RBP4.48□□□□□ -1.69
CDC27-215ENST00000573550 TTC30BQ8N4P2 665 aa4.48□□□□□ -1.69
CDC27-215ENST00000573550 OR52K2Q8NGK3 314 aa4.48□□□□□ -1.69
CDC27-215ENST00000573550 OR5R1Q8NH85 324 aa4.48□□□□□ -1.69
CDC27-215ENST00000573550 OR14L1PQ8NHC6 308 aa4.48□□□□□ -1.69
CDC27-215ENST00000573550 SPATA3Q8NHX4 192 aa4.48□□□□□ -1.69
CDC27-215ENST00000573550 CD200R1Q8TD46 325 aa4.48□□□□□ -1.69
CDC27-215ENST00000573550 TRUB1Q8WWH5 349 aaKnown RBP4.48□□□□□ -1.69
CDC27-215ENST00000573550 PSMG2Q969U7 264 aa4.48□□□□□ -1.69
CDC27-215ENST00000573550 C12orf43Q96C57 262 aaKnown RBP4.48□□□□□ -1.69
CDC27-215ENST00000573550 CDKN2AIPNLQ96HQ2 116 aa4.48□□□□□ -1.69
CDC27-215ENST00000573550 NSMCE2Q96MF7 247 aa4.48□□□□□ -1.69
CDC27-215ENST00000573550 TMEM68Q96MH6 324 aa4.48□□□□□ -1.69
CDC27-215ENST00000573550 MTERF1Q99551 399 aaKnown RBP4.48□□□□□ -1.69
CDC27-215ENST00000573550 SEMA3CQ99985 751 aa4.48□□□□□ -1.69
CDC27-215ENST00000573550 SLC39A3Q9BRY0 314 aa4.48□□□□□ -1.69
CDC27-215ENST00000573550 C1orf50Q9BV19 199 aa4.48□□□□□ -1.69
CDC27-215ENST00000573550 UGT2B28Q9BY64 529 aa4.48□□□□□ -1.69
CDC27-215ENST00000573550 GABARAPL1Q9H0R8 117 aa4.48□□□□□ -1.69
CDC27-215ENST00000573550 SEMA6AQ9H2E6 1030 aa4.48□□□□□ -1.69
CDC27-215ENST00000573550 RPF2Q9H7B2 306 aaKnown RBP4.48□□□□□ -1.69
CDC27-215ENST00000573550 CXorf21Q9HAI6 301 aa4.48□□□□□ -1.69
CDC27-215ENST00000573550 NMUR1Q9HB89 426 aa4.48□□□□□ -1.69
CDC27-215ENST00000573550 ANKHQ9HCJ1 492 aa4.48□□□□□ -1.69
CDC27-215ENST00000573550 FBRSL1Q9HCM7 1045 aaKnown RBP4.48□□□□□ -1.69
CDC27-215ENST00000573550 SDF2L1Q9HCN8 221 aa4.48□□□□□ -1.69
CDC27-215ENST00000573550 HPS4Q9NQG7 708 aa4.48□□□□□ -1.69
CDC27-215ENST00000573550 CHCHD3Q9NX63 227 aaKnown RBP4.48□□□□□ -1.69
CDC27-215ENST00000573550 MIOSQ9NXC5 875 aa4.48□□□□□ -1.69
CDC27-215ENST00000573550 DNAJB9Q9UBS3 223 aa4.48□□□□□ -1.69
CDC27-215ENST00000573550 TRMT6Q9UJA5 497 aaKnown RBP4.48□□□□□ -1.69
CDC27-215ENST00000573550 RALYQ9UKM9 306 aaKnown RBP4.48□□□□□ -1.69
CDC27-215ENST00000573550 ACSL5Q9ULC5 683 aa4.48□□□□□ -1.69
CDC27-215ENST00000573550 FAF1Q9UNN5 650 aaPredicted RBP4.48□□□□□ -1.69
CDC27-215ENST00000573550 AURKCQ9UQB9 309 aa4.48□□□□□ -1.69
CDC27-215ENST00000573550 HSPE1-MOB4S4R3N1 261 aa4.48□□□□□ -1.69
CDC27-215ENST00000573550 DOCK3Q8IZD9 2030 aa4.48□□□□□ -1.69
CDC27-215ENST00000573550 PLXNA4Q9HCM2 1894 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 ZFC3H1O60293 1989 aaKnown RBP4.47□□□□□ -1.69
CDC27-215ENST00000573550 BPTFQ12830 3046 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 ATP6AP2A0A1C7CYW4 349 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 FAM220BPB1ANY3 271 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 J3KRW8 73 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 M0QX08 132 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 UPK1AO00322 258 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 LSM1O15116 133 aaKnown RBP4.47□□□□□ -1.69
CDC27-215ENST00000573550 RAD51BO15315 384 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 INPP4BO15327 924 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 SPINT2O43291 252 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 KDELR3O43731 214 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 PFDN1O60925 122 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 NDUFS3O75489 264 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 GMNNO75496 209 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 ATP6AP2O75787 350 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 RECQL5O94762 991 aaPredicted RBP4.47□□□□□ -1.69
CDC27-215ENST00000573550 SIX3O95343 332 aaPredicted RBP4.47□□□□□ -1.69
CDC27-215ENST00000573550 MOCS2O96007 188 aaPredicted RBP4.47□□□□□ -1.69
CDC27-215ENST00000573550 IL6P05231 212 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 GNAO1P09471 354 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 SPARCP09486 303 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 CCDC159P0C7I6 412 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 CCNA2P20248 432 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 CRHBPP24387 322 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 HRH2P25021 359 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 OR1E1P30953 314 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 MAGEA2P43356 314 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 BRCC3P46736 316 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 RGS4P49798 205 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 FOXA1P55317 472 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 TAS2R38P59533 333 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 CXCR4P61073 352 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 MAXP61244 160 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 AP1S1P61966 158 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 PHEXP78562 749 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 PPP2R2BQ00005 443 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 CHRNB3Q05901 458 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 CACNG1Q06432 222 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 ACSM2AQ08AH3 577 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 ABRQ12979 859 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 GRB7Q14451 532 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 TGFBIQ15582 683 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 TSNQ15631 228 aaKnown RBP4.47□□□□□ -1.69
CDC27-215ENST00000573550 DECR1Q16698 335 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 SYT16Q17RD7 645 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 GGTA1PQ4G0N0 100 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 SLC39A12Q504Y0 691 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 ZNF628Q5EBL2 1059 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 LRIF1Q5T3J3 769 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 LYPLAL1Q5VWZ2 237 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 NANOGP8Q6NSW7 305 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 KLHL35Q6PF15 583 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 CYP20A1Q6UW02 462 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 DLEU7Q6UYE1 221 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 GLT6D1Q7Z4J2 308 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 DSG4Q86SJ6 1040 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 SYVN1Q86TM6 617 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 SLC9B2Q86UD5 537 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 KMT5CQ86Y97 462 aa4.47□□□□□ -1.69
CDC27-215ENST00000573550 CLVS1Q8IUQ0 354 aaPredicted RBP4.47□□□□□ -1.69
CDC27-215ENST00000573550 C8orf59Q8N0T1 100 aaPredicted RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms