RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 JADE3Q92613 823 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 LMF2Q9BU23 707 aaKnown RBP8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 SFXN3Q9BWM7 321 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 RBM24Q9BX46 236 aaKnown RBP8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 CLEC4MQ9H2X3 399 aaPredicted RBP8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 REEP4Q9H6H4 257 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 FAM120CQ9NX05 1096 aaKnown RBP8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 MKS1Q9NXB0 559 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 FLRT3Q9NZU0 649 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 MED11Q9P086 117 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 SLC17A7Q9P2U7 560 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 BAIAP2L1Q9UHR4 511 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 TMED5Q9Y3A6 229 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 CCL27Q9Y4X3 112 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 MAP1AP78559 2803 aaPredicted RBP8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 HIVEP1P15822 2718 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 GXYLT2A0PJZ3 443 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 TTC36A6NLP5 189 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 A6NNC1 897 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 TMEM114B3SHH9 223 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 PIP5K1BO14986 540 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 LSM1O15116 133 aaKnown RBP8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 FADS1O60427 444 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 SKAP2O75563 359 aaPredicted RBP8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 CTAG2O75638 210 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 UTS2O95399 124 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 PSMG1O95456 288 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 IL33O95760 270 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 IL18BPO95998 194 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 NUDT17P0C025 328 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 PEPDP12955 493 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 HPGDP15428 266 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 CD1EP15812 388 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 ZNF708P17019 499 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 EFNA1P20827 205 aaPredicted RBP8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 DNAJA1P31689 397 aaKnown RBP8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 GAS1P54826 345 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 DIO3P55073 304 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 CLDN18P56856 261 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 FOXF2Q12947 444 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 KIAA0040Q15053 153 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 FBXL19-AS1Q494R0 122 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 RFTN2Q52LD8 501 aaPredicted RBP8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 ARL13AQ5H913 290 aaPredicted RBP8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 POMZP3Q6PJE2 187 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 Q6ZSR9 355 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 R3HCC1LQ7Z5L2 792 aaKnown RBP8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 MARCH3Q86UD3 253 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 HOMEZQ8IX15 550 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 CNEP1R1Q8N9A8 125 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 CDRT4Q8N9R6 151 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 OR2M3Q8NG83 312 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 CEP70Q8NHQ1 597 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 PPP1R14CQ8TAE6 165 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 TCP10LQ8TDR4 215 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 FAM222BQ8WU58 562 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 WNT2BQ93097 391 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 PPP3R2Q96LZ3 170 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 MS4A4EQ96PG1 132 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 YIPF4Q9BSR8 244 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 C1orf50Q9BV19 199 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 TUBB1Q9H4B7 451 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 CLCF1Q9UBD9 225 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 LGALS13Q9UHV8 139 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 MRPS18CQ9Y3D5 142 aaKnown RBP8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 TRAF6Q9Y4K3 522 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 DNAJC15Q9Y5T4 150 aa8.74□□□□□ -1.01
NPLOC4-212ENST00000573328 SLC22A20A6NK97 555 aa8.73□□□□□ -1.01
NPLOC4-212ENST00000573328 NPIPB8E9PQR5 432 aa8.73□□□□□ -1.01
NPLOC4-212ENST00000573328 EMC8O43402 210 aa8.73□□□□□ -1.01
NPLOC4-212ENST00000573328 ZIC3O60481 467 aa8.73□□□□□ -1.01
NPLOC4-212ENST00000573328 PEX11AO75192 247 aa8.73□□□□□ -1.01
NPLOC4-212ENST00000573328 SMNDC1O75940 238 aaKnown RBP eCLIP8.73□□□□□ -1.01
NPLOC4-212ENST00000573328 RCBTB2O95199 551 aa8.73□□□□□ -1.01
NPLOC4-212ENST00000573328 SLU7O95391 586 aaKnown RBP8.73□□□□□ -1.01
NPLOC4-212ENST00000573328 ANGPTL1O95841 491 aa8.73□□□□□ -1.01
NPLOC4-212ENST00000573328 IFI6P09912 130 aa8.73□□□□□ -1.01
NPLOC4-212ENST00000573328 BCKDHAP12694 445 aa8.73□□□□□ -1.01
NPLOC4-212ENST00000573328 RPL3P39023 403 aaKnown RBP8.73□□□□□ -1.01
NPLOC4-212ENST00000573328 EEFSECP57772 596 aaKnown RBP8.73□□□□□ -1.01
NPLOC4-212ENST00000573328 SIRPAP78324 504 aa8.73□□□□□ -1.01
NPLOC4-212ENST00000573328 PRR5P85299 388 aa8.73□□□□□ -1.01
NPLOC4-212ENST00000573328 SORDQ00796 357 aa8.73□□□□□ -1.01
NPLOC4-212ENST00000573328 C17orf67Q0P5P2 114 aa8.73□□□□□ -1.01
NPLOC4-212ENST00000573328 GRAMD1BQ3KR37 738 aa8.73□□□□□ -1.01
NPLOC4-212ENST00000573328 ATP6AP1LQ52LC2 224 aa8.73□□□□□ -1.01
NPLOC4-212ENST00000573328 OR2A2Q6IF42 318 aa8.73□□□□□ -1.01
NPLOC4-212ENST00000573328 EMBQ6PCB8 327 aa8.73□□□□□ -1.01
NPLOC4-212ENST00000573328 FIGNL1Q6PIW4 674 aa8.73□□□□□ -1.01
NPLOC4-212ENST00000573328 RNF165Q6ZSG1 346 aa8.73□□□□□ -1.01
NPLOC4-212ENST00000573328 EXOC3L1Q86VI1 746 aa8.73□□□□□ -1.01
NPLOC4-212ENST00000573328 COX18Q8N8Q8 333 aa8.73□□□□□ -1.01
NPLOC4-212ENST00000573328 FADS6Q8N9I5 356 aa8.73□□□□□ -1.01
NPLOC4-212ENST00000573328 GATSQ8NAP1 163 aa8.73□□□□□ -1.01
NPLOC4-212ENST00000573328 FNDC5Q8NAU1 212 aa8.73□□□□□ -1.01
NPLOC4-212ENST00000573328 OR5M1Q8NGP8 315 aa8.73□□□□□ -1.01
NPLOC4-212ENST00000573328 LINC01560Q8TB33 94 aa8.73□□□□□ -1.01
NPLOC4-212ENST00000573328 DUSP19Q8WTR2 217 aa8.73□□□□□ -1.01
NPLOC4-212ENST00000573328 RNF138Q8WVD3 245 aa8.73□□□□□ -1.01
NPLOC4-212ENST00000573328 MTERF3Q96E29 417 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms