RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 HPCAL1P37235 193 aa15.69■□□□□ 0.1
SMG6-212ENST00000573153 STARP49675 285 aa15.69■□□□□ 0.1
SMG6-212ENST00000573153 ABCE1P61221 599 aaKnown RBP15.69■□□□□ 0.1
SMG6-212ENST00000573153 HSPB3Q12988 150 aa15.69■□□□□ 0.1
SMG6-212ENST00000573153 SNTB1Q13884 538 aaKnown RBP15.69■□□□□ 0.1
SMG6-212ENST00000573153 MPP2Q14168 576 aa15.69■□□□□ 0.1
SMG6-212ENST00000573153 SF3B4Q15427 424 aaKnown RBP eCLIP15.69■□□□□ 0.1
SMG6-212ENST00000573153 HSPB2Q16082 182 aa15.69■□□□□ 0.1
SMG6-212ENST00000573153 DECR1Q16698 335 aa15.69■□□□□ 0.1
SMG6-212ENST00000573153 ZAR1Q86SH2 424 aa15.69■□□□□ 0.1
SMG6-212ENST00000573153 TRIM42Q8IWZ5 723 aa15.69■□□□□ 0.1
SMG6-212ENST00000573153 KIRREL3Q8IZU9 778 aa15.69■□□□□ 0.1
SMG6-212ENST00000573153 NATD1Q8N6N6 113 aa15.69■□□□□ 0.1
SMG6-212ENST00000573153 OR2M3Q8NG83 312 aa15.69■□□□□ 0.1
SMG6-212ENST00000573153 CEP70Q8NHQ1 597 aa15.69■□□□□ 0.1
SMG6-212ENST00000573153 PSMA8Q8TAA3 256 aa15.69■□□□□ 0.1
SMG6-212ENST00000573153 ZPLD1Q8TCW7 415 aa15.69■□□□□ 0.1
SMG6-212ENST00000573153 ZNF395Q9H8N7 513 aaPredicted RBP15.69■□□□□ 0.1
SMG6-212ENST00000573153 C3orf14Q9HBI5 128 aa15.69■□□□□ 0.1
SMG6-212ENST00000573153 SH3BP4Q9P0V3 963 aa15.69■□□□□ 0.1
SMG6-212ENST00000573153 MRTO4Q9UKD2 239 aaKnown RBP15.69■□□□□ 0.1
SMG6-212ENST00000573153 NUP214P35658 2090 aaPredicted RBP15.69■□□□□ 0.1
SMG6-212ENST00000573153 HRNRQ86YZ3 2850 aaPredicted RBP15.69■□□□□ 0.1
SMG6-212ENST00000573153 SYT5O00445 386 aa15.68■□□□□ 0.1
SMG6-212ENST00000573153 HCRTR2O43614 444 aa15.68■□□□□ 0.1
SMG6-212ENST00000573153 ITM2AO43736 263 aa15.68■□□□□ 0.1
SMG6-212ENST00000573153 ACP2P11117 423 aa15.68■□□□□ 0.1
SMG6-212ENST00000573153 EFNA1P20827 205 aaPredicted RBP15.68■□□□□ 0.1
SMG6-212ENST00000573153 PSMD4P55036 377 aaKnown RBP15.68■□□□□ 0.1
SMG6-212ENST00000573153 MANFP55145 182 aaKnown RBP15.68■□□□□ 0.1
SMG6-212ENST00000573153 FOXF2Q12947 444 aa15.68■□□□□ 0.1
SMG6-212ENST00000573153 CHI3L2Q15782 390 aa15.68■□□□□ 0.1
SMG6-212ENST00000573153 VPS26BQ4G0F5 336 aa15.68■□□□□ 0.1
SMG6-212ENST00000573153 ZCCHC12Q6PEW1 402 aa15.68■□□□□ 0.1
SMG6-212ENST00000573153 RIMKLAQ8IXN7 391 aa15.68■□□□□ 0.1
SMG6-212ENST00000573153 CDRT4Q8N9R6 151 aa15.68■□□□□ 0.1
SMG6-212ENST00000573153 PPP1R14CQ8TAE6 165 aa15.68■□□□□ 0.1
SMG6-212ENST00000573153 FAM110BQ8TC76 370 aa15.68■□□□□ 0.1
SMG6-212ENST00000573153 PIK3R3Q92569 461 aa15.68■□□□□ 0.1
SMG6-212ENST00000573153 COQ8BQ96D53 544 aa15.68■□□□□ 0.1
SMG6-212ENST00000573153 MS4A4EQ96PG1 132 aa15.68■□□□□ 0.1
SMG6-212ENST00000573153 TRIB1Q96RU8 372 aa15.68■□□□□ 0.1
SMG6-212ENST00000573153 KLHDC3Q9BQ90 382 aa15.68■□□□□ 0.1
SMG6-212ENST00000573153 C20orf27Q9GZN8 174 aa15.68■□□□□ 0.1
SMG6-212ENST00000573153 CALHM2Q9HA72 323 aa15.68■□□□□ 0.1
SMG6-212ENST00000573153 FAM120CQ9NX05 1096 aaKnown RBP15.68■□□□□ 0.1
SMG6-212ENST00000573153 TAS2R10Q9NYW0 307 aa15.68■□□□□ 0.1
SMG6-212ENST00000573153 KCNN3Q9UGI6 736 aa15.68■□□□□ 0.1
SMG6-212ENST00000573153 RAP2CQ9Y3L5 183 aa15.68■□□□□ 0.1
SMG6-212ENST00000573153 ANKHD1Q8IWZ3 2542 aaKnown RBP15.68■□□□□ 0.1
SMG6-212ENST00000573153 CCDC168Q8NDH2 2452 aa15.67■□□□□ 0.1
SMG6-212ENST00000573153 IGLV3-32A0A0A0MS00 114 aa15.67■□□□□ 0.1
SMG6-212ENST00000573153 EMC8O43402 210 aa15.67■□□□□ 0.1
SMG6-212ENST00000573153 SCO2O43819 266 aa15.67■□□□□ 0.1
SMG6-212ENST00000573153 SKAP2O75563 359 aaPredicted RBP15.67■□□□□ 0.1
SMG6-212ENST00000573153 HSPA4LO95757 839 aa15.67■□□□□ 0.1
SMG6-212ENST00000573153 MYZAPP0CAP1 466 aa15.67■□□□□ 0.1
SMG6-212ENST00000573153 BMP5P22003 454 aa15.67■□□□□ 0.1
SMG6-212ENST00000573153 GPC1P35052 558 aa15.67■□□□□ 0.1
SMG6-212ENST00000573153 SLC18A1P54219 525 aa15.67■□□□□ 0.1
SMG6-212ENST00000573153 EMX2Q04743 252 aa15.67■□□□□ 0.1
SMG6-212ENST00000573153 MAD2L1Q13257 205 aaPredicted RBP15.67■□□□□ 0.1
SMG6-212ENST00000573153 PTGR1Q14914 329 aa15.67■□□□□ 0.1
SMG6-212ENST00000573153 TOMM20Q15388 145 aa15.67■□□□□ 0.1
SMG6-212ENST00000573153 TMEM44Q2T9K0 475 aa15.67■□□□□ 0.1
SMG6-212ENST00000573153 IL23RQ5VWK5 629 aa15.67■□□□□ 0.1
SMG6-212ENST00000573153 MFSD12Q6NUT3 480 aa15.67■□□□□ 0.1
SMG6-212ENST00000573153 CAMKMTQ7Z624 323 aa15.67■□□□□ 0.1
SMG6-212ENST00000573153 LRRC34Q8IZ02 419 aa15.67■□□□□ 0.1
SMG6-212ENST00000573153 ZNF781Q8N8C0 355 aa15.67■□□□□ 0.1
SMG6-212ENST00000573153 FNDC5Q8NAU1 212 aa15.67■□□□□ 0.1
SMG6-212ENST00000573153 NUP43Q8NFH3 380 aa15.67■□□□□ 0.1
SMG6-212ENST00000573153 SORT1Q99523 831 aa15.67■□□□□ 0.1
SMG6-212ENST00000573153 FBXO34Q9NWN3 711 aa15.67■□□□□ 0.1
SMG6-212ENST00000573153 ZNF629Q9UEG4 869 aaPredicted RBP15.67■□□□□ 0.1
SMG6-212ENST00000573153 NGFRP08138 427 aa15.66■□□□□ 0.1
SMG6-212ENST00000573153 PRPS1L1P21108 318 aa15.66■□□□□ 0.1
SMG6-212ENST00000573153 LCN1P31025 176 aa15.66■□□□□ 0.1
SMG6-212ENST00000573153 GCKP35557 465 aa15.66■□□□□ 0.1
SMG6-212ENST00000573153 ASCL1P50553 236 aa15.66■□□□□ 0.1
SMG6-212ENST00000573153 GRAMD1BQ3KR37 738 aa15.66■□□□□ 0.1
SMG6-212ENST00000573153 IFNEQ86WN2 208 aa15.66■□□□□ 0.1
SMG6-212ENST00000573153 SLC16A11Q8NCK7 471 aa15.66■□□□□ 0.1
SMG6-212ENST00000573153 OR7A2PQ8NGA2 310 aa15.66■□□□□ 0.1
SMG6-212ENST00000573153 OR14L1PQ8NHC6 308 aa15.66■□□□□ 0.1
SMG6-212ENST00000573153 TUBGCP3Q96CW5 907 aa15.66■□□□□ 0.1
SMG6-212ENST00000573153 NPAS1Q99742 590 aa15.66■□□□□ 0.1
SMG6-212ENST00000573153 C1orf50Q9BV19 199 aa15.66■□□□□ 0.1
SMG6-212ENST00000573153 DSN1Q9H410 356 aa15.66■□□□□ 0.1
SMG6-212ENST00000573153 EQTNQ9NQ60 294 aa15.66■□□□□ 0.1
SMG6-212ENST00000573153 ATAD3AQ9NVI7 634 aa15.66■□□□□ 0.1
SMG6-212ENST00000573153 GIN1Q9NXP7 522 aa15.66■□□□□ 0.1
SMG6-212ENST00000573153 WDR91A4D1P6 747 aa15.65■□□□□ 0.1
SMG6-212ENST00000573153 CLCA1A8K7I4 914 aa15.65■□□□□ 0.1
SMG6-212ENST00000573153 H0YC42 278 aa15.65■□□□□ 0.1
SMG6-212ENST00000573153 ERLIN1O75477 346 aa15.65■□□□□ 0.1
SMG6-212ENST00000573153 KCNH1O95259 989 aa15.65■□□□□ 0.1
SMG6-212ENST00000573153 UTS2O95399 124 aa15.65■□□□□ 0.1
SMG6-212ENST00000573153 TGM6O95932 706 aa15.65■□□□□ 0.1
SMG6-212ENST00000573153 IL18BPO95998 194 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms