RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 SLC26A3P40879 764 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 MATKP42679 507 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 SLC1A2P43004 574 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 CCR8P51685 355 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 EFNB2P52799 333 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 PLK1P53350 603 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 CTSCP53634 463 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 ATP6V0D1P61421 351 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 ARF6P62330 175 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 PPP2CBP62714 309 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 KCNJ2P63252 427 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 PPP2CAP67775 309 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 NAAAQ02083 359 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 NHLH2Q02577 135 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 RBBP4Q09028 425 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 CDC20Q12834 499 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 MED21Q13503 144 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 ADGRE1Q14246 886 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 EXOC3L4Q17RC7 722 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 C5orf64Q2M2E5 130 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 VPS26BQ4G0F5 336 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 Q4G0T1 1027 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 PDCD4Q53EL6 469 aaKnown RBP4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 MTX3Q5HYI7 312 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 CEP85LQ5SZL2 805 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 CELF3Q5SZQ8 465 aaKnown RBP4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 SEL1L2Q5TEA6 688 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 SLC22A10Q63ZE4 541 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 ZNF776Q68DI1 518 aaPredicted RBP4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 CTRB2Q6GPI1 263 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 P4HA3Q7Z4N8 544 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 PRUNE1Q86TP1 453 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 LDLRAD3Q86YD5 345 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 SFTPA2Q8IWL1 248 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 C10orf67Q8IYJ2 551 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 ZNF100Q8IYN0 542 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 BEST3Q8N1M1 668 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 SYS1Q8N2H4 156 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 PRSS35Q8N3Z0 413 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 LNX2Q8N448 690 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 SLC5A8Q8N695 610 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 LINC00482Q8N8I6 264 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 SDR9C7Q8NEX9 313 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 OR4K1Q8NGD4 311 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 OR5D18Q8NGL1 313 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 OR4A4PQ8NGN8 299 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 OR5M1Q8NGP8 315 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 OR1L6Q8NGR2 347 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 CCDC107Q8WV48 283 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 NUDCD2Q8WVJ2 157 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 ACOT11Q8WXI4 607 aaPredicted RBP4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 HSD17B8Q92506 261 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 PPP1R36Q96LQ0 422 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 RANBP9Q96S59 729 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 HSD17B14Q9BPX1 270 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 SDCBP2Q9H190 292 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 GBA3Q9H227 469 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 RIMS4Q9H426 269 aaPredicted RBP4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 WDR54Q9H977 334 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 L2HGDHQ9H9P8 463 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 GKN1Q9NS71 199 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 SAMSN1Q9NSI8 373 aaKnown RBP4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 C1orf123Q9NWV4 160 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 MRPL39Q9NYK5 338 aaKnown RBP4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 STMN3Q9NZ72 180 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 PTTG2Q9NZH5 202 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 NOP53Q9NZM5 478 aaKnown RBP4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 B3GAT1Q9P2W7 334 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 ZNF282Q9UDV7 671 aaPredicted RBP4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 C3orf18Q9UK00 162 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 PRPF19Q9UMS4 504 aaKnown RBP4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 ADAMTS5Q9UNA0 930 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 NPIPA1Q9UND3 350 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 POLDIP2Q9Y2S7 368 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 TIMM10BQ9Y5J6 103 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 PEX16Q9Y5Y5 336 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 NACADO15069 1562 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 ELP1O95163 1332 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 UMODL1Q5DID0 1318 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 ATP6AP2A0A1C7CYW4 349 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 OR2M5A3KFT3 312 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 CCDC182A6NF36 153 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 H3BN98 237 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 OR7A17O14581 309 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 SIVA1O15304 175 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 XRCC2O43543 280 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 SNAI2O43623 268 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 GMDSO60547 372 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 MFAP3LO75121 409 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 STK17BO94768 372 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 NXPH3O95157 252 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 BRI3O95415 125 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 EML2O95834 649 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 WDPCPO95876 746 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 KRT16P08779 473 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 OR4E1P0C645 316 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 CBSLP0DN79 551 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 ST6GAL1P15907 406 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 POLR2EP19388 210 aaKnown RBP4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 SYT1P21579 422 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms