RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 MSX1P28360 303 aa12.2□□□□□ -0.46
CCDC40-205ENST00000571028 PTGS2P35354 604 aa12.2□□□□□ -0.46
CCDC40-205ENST00000571028 KRT20P35900 424 aa12.2□□□□□ -0.46
CCDC40-205ENST00000571028 PRIM2P49643 509 aa12.2□□□□□ -0.46
CCDC40-205ENST00000571028 FBXW4P57775 412 aa12.2□□□□□ -0.46
CCDC40-205ENST00000571028 DCAF7P61962 342 aa12.2□□□□□ -0.46
CCDC40-205ENST00000571028 GAB1Q13480 694 aa12.2□□□□□ -0.46
CCDC40-205ENST00000571028 GTDC1Q4AE62 458 aa12.2□□□□□ -0.46
CCDC40-205ENST00000571028 DESI1Q6ICB0 168 aa12.2□□□□□ -0.46
CCDC40-205ENST00000571028 MFSD12Q6NUT3 480 aa12.2□□□□□ -0.46
CCDC40-205ENST00000571028 C6orf120Q7Z4R8 191 aa12.2□□□□□ -0.46
CCDC40-205ENST00000571028 MDGA2Q7Z553 956 aa12.2□□□□□ -0.46
CCDC40-205ENST00000571028 GALNT10Q86SR1 603 aa12.2□□□□□ -0.46
CCDC40-205ENST00000571028 BIVMQ86UB2 503 aa12.2□□□□□ -0.46
CCDC40-205ENST00000571028 CD163Q86VB7 1156 aa12.2□□□□□ -0.46
CCDC40-205ENST00000571028 SIAH3Q8IW03 269 aa12.2□□□□□ -0.46
CCDC40-205ENST00000571028 CPSF7Q8N684 471 aaKnown RBP12.2□□□□□ -0.46
CCDC40-205ENST00000571028 SLC15A4Q8N697 577 aa12.2□□□□□ -0.46
CCDC40-205ENST00000571028 MDS2Q8NDY4 140 aa12.2□□□□□ -0.46
CCDC40-205ENST00000571028 PNPT1Q8TCS8 783 aaKnown RBP12.2□□□□□ -0.46
CCDC40-205ENST00000571028 PIK3R3Q92569 461 aa12.2□□□□□ -0.46
CCDC40-205ENST00000571028 RND1Q92730 232 aa12.2□□□□□ -0.46
CCDC40-205ENST00000571028 SPACA9Q96E40 222 aaPredicted RBP12.2□□□□□ -0.46
CCDC40-205ENST00000571028 RMND5BQ96G75 393 aaPredicted RBP12.2□□□□□ -0.46
CCDC40-205ENST00000571028 SCMH1Q96GD3 660 aa12.2□□□□□ -0.46
CCDC40-205ENST00000571028 SLC35G5Q96KT7 338 aa12.2□□□□□ -0.46
CCDC40-205ENST00000571028 NMUR2Q9GZQ4 415 aa12.2□□□□□ -0.46
CCDC40-205ENST00000571028 ZNF385DQ9H6B1 395 aa12.2□□□□□ -0.46
CCDC40-205ENST00000571028 IL1RL2Q9HB29 575 aa12.2□□□□□ -0.46
CCDC40-205ENST00000571028 Q9N2J8 555 aa12.2□□□□□ -0.46
CCDC40-205ENST00000571028 SAR1AQ9NR31 198 aa12.2□□□□□ -0.46
CCDC40-205ENST00000571028 CACNA1CQ13936 2221 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 LOC100653049A0A140TA62 436 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 SNX3O60493 162 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 KRT34O76011 436 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 NEURL1O76050 574 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 PSMG1O95456 288 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 SP1P08047 785 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 HOXD4P09016 255 aaPredicted RBP12.19□□□□□ -0.46
CCDC40-205ENST00000571028 CT45A8P0DMV1 189 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 CT45A9P0DMV2 189 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 ACP2P11117 423 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 MATN1P21941 496 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 ABCD3P28288 659 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 IL12BP29460 328 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 TRHRP34981 398 aaPredicted RBP12.19□□□□□ -0.46
CCDC40-205ENST00000571028 MRPL19P49406 292 aaKnown RBP12.19□□□□□ -0.46
CCDC40-205ENST00000571028 GPR85P60893 370 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 PSG6Q00889 435 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 KLF10Q13118 480 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 ZNF791Q3KP31 576 aaPredicted RBP12.19□□□□□ -0.46
CCDC40-205ENST00000571028 CT45A2Q5DJT8 189 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 PRAMEF20Q5VT98 475 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 SLC25A25Q6KCM7 469 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 TNFAIP8L2Q6P589 184 aaPredicted RBP12.19□□□□□ -0.46
CCDC40-205ENST00000571028 BHLHB9Q6PI77 547 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 LYPD8Q6UX82 237 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 RTL4Q6ZR62 310 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 MTDHQ86UE4 582 aaKnown RBP12.19□□□□□ -0.46
CCDC40-205ENST00000571028 ZNF227Q86WZ6 799 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 ARMC10Q8N2F6 343 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 TRIML2Q8N7C3 387 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 CDRT4Q8N9R6 151 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 SLC16A11Q8NCK7 471 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 OR10G3Q8NGC4 313 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 LILRB4Q8NHJ6 448 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 SFXN5Q8TD22 340 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 ADAMTS15Q8TE58 950 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 CDS1Q92903 461 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 MOAP1Q96BY2 351 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 EFHD2Q96C19 240 aaPredicted RBP12.19□□□□□ -0.46
CCDC40-205ENST00000571028 HSPBAP1Q96EW2 488 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 GIMAP5Q96F15 307 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 BTBD9Q96Q07 612 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 CCT8L2Q96SF2 557 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 ADOQ96SZ5 270 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 LMF2Q9BU23 707 aaKnown RBP12.19□□□□□ -0.46
CCDC40-205ENST00000571028 POLDIP3Q9BY77 421 aaKnown RBP12.19□□□□□ -0.46
CCDC40-205ENST00000571028 UCK2Q9BZX2 261 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 TIMMDC1Q9NPL8 285 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 SLC6A13Q9NSD5 602 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 ST6GALNAC2Q9UJ37 374 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 CBLCQ9ULV8 474 aa12.19□□□□□ -0.46
CCDC40-205ENST00000571028 CAPN14A8MX76 684 aa12.18□□□□□ -0.46
CCDC40-205ENST00000571028 TFECO14948 347 aaPredicted RBP12.18□□□□□ -0.46
CCDC40-205ENST00000571028 ANGPT2O15123 496 aa12.18□□□□□ -0.46
CCDC40-205ENST00000571028 ACOX3O15254 700 aa12.18□□□□□ -0.46
CCDC40-205ENST00000571028 CDC40O60508 579 aaKnown RBP eCLIP12.18□□□□□ -0.46
CCDC40-205ENST00000571028 CCDC22O60826 627 aa12.18□□□□□ -0.46
CCDC40-205ENST00000571028 P04436 131 aa12.18□□□□□ -0.46
CCDC40-205ENST00000571028 FBXO45P0C2W1 286 aa12.18□□□□□ -0.46
CCDC40-205ENST00000571028 CCL3P10147 92 aa12.18□□□□□ -0.46
CCDC40-205ENST00000571028 PIGAP37287 484 aa12.18□□□□□ -0.46
CCDC40-205ENST00000571028 RFC3P40938 356 aa12.18□□□□□ -0.46
CCDC40-205ENST00000571028 IRX1P78414 480 aaPredicted RBP12.18□□□□□ -0.46
CCDC40-205ENST00000571028 LRRC74AQ0VAA2 488 aa12.18□□□□□ -0.46
CCDC40-205ENST00000571028 RCAN2Q14206 197 aa12.18□□□□□ -0.46
CCDC40-205ENST00000571028 DUSP5Q16690 384 aa12.18□□□□□ -0.46
CCDC40-205ENST00000571028 PAGE3Q5JUK9 113 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms