RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 POTEKPQ9BYX7 375 aa9.25□□□□□ -0.93
CTDNEP1-202ENST00000570380 PTGES2Q9H7Z7 377 aa9.25□□□□□ -0.93
CTDNEP1-202ENST00000570380 SAYSD1Q9NPB0 183 aa9.25□□□□□ -0.93
CTDNEP1-202ENST00000570380 FLRT3Q9NZU0 649 aa9.25□□□□□ -0.93
CTDNEP1-202ENST00000570380 MCTS1Q9ULC4 181 aaKnown RBP9.25□□□□□ -0.93
CTDNEP1-202ENST00000570380 IGHV4-61A0A0C4DH41 118 aa9.24□□□□□ -0.93
CTDNEP1-202ENST00000570380 GOLGA6L10A6NI86 522 aa9.24□□□□□ -0.93
CTDNEP1-202ENST00000570380 H0YIV9 168 aa9.24□□□□□ -0.93
CTDNEP1-202ENST00000570380 PHGDHO43175 533 aaKnown RBP9.24□□□□□ -0.93
CTDNEP1-202ENST00000570380 FADS1O60427 444 aa9.24□□□□□ -0.93
CTDNEP1-202ENST00000570380 ERAL1O75616 437 aaKnown RBP9.24□□□□□ -0.93
CTDNEP1-202ENST00000570380 OPN1LWP04000 364 aa9.24□□□□□ -0.93
CTDNEP1-202ENST00000570380 S100BP04271 92 aaPredicted RBP9.24□□□□□ -0.93
CTDNEP1-202ENST00000570380 KLK1P06870 262 aa9.24□□□□□ -0.93
CTDNEP1-202ENST00000570380 CTAGE8P0CG41 777 aa9.24□□□□□ -0.93
CTDNEP1-202ENST00000570380 COL6A2P12110 1019 aa9.24□□□□□ -0.93
CTDNEP1-202ENST00000570380 CSNK2A2P19784 350 aaPredicted RBP9.24□□□□□ -0.93
CTDNEP1-202ENST00000570380 KRT20P35900 424 aa9.24□□□□□ -0.93
CTDNEP1-202ENST00000570380 ELK3P41970 407 aa9.24□□□□□ -0.93
CTDNEP1-202ENST00000570380 EFNA4P52798 201 aa9.24□□□□□ -0.93
CTDNEP1-202ENST00000570380 PHEXP78562 749 aa9.24□□□□□ -0.93
CTDNEP1-202ENST00000570380 LGSNQ5TDP6 509 aa9.24□□□□□ -0.93
CTDNEP1-202ENST00000570380 STEAP4Q687X5 459 aa9.24□□□□□ -0.93
CTDNEP1-202ENST00000570380 SLC48A1Q6P1K1 146 aa9.24□□□□□ -0.93
CTDNEP1-202ENST00000570380 CCDC137Q6PK04 289 aaKnown RBP9.24□□□□□ -0.93
CTDNEP1-202ENST00000570380 CTAGE4Q8IX94 777 aa9.24□□□□□ -0.93
CTDNEP1-202ENST00000570380 SEMA6DQ8NFY4 1073 aa9.24□□□□□ -0.93
CTDNEP1-202ENST00000570380 UHMK1Q8TAS1 419 aaKnown RBP9.24□□□□□ -0.93
CTDNEP1-202ENST00000570380 ZFAND2BQ8WV99 257 aa9.24□□□□□ -0.93
CTDNEP1-202ENST00000570380 DHRS9Q9BPW9 319 aa9.24□□□□□ -0.93
CTDNEP1-202ENST00000570380 CAB39LQ9H9S4 337 aa9.24□□□□□ -0.93
CTDNEP1-202ENST00000570380 SDHAF3Q9NRP4 125 aa9.24□□□□□ -0.93
CTDNEP1-202ENST00000570380 PAQR5Q9NXK6 330 aaPredicted RBP9.24□□□□□ -0.93
CTDNEP1-202ENST00000570380 NPAP1Q9NZP6 1156 aa9.24□□□□□ -0.93
CTDNEP1-202ENST00000570380 OPTCQ9UBM4 332 aa9.24□□□□□ -0.93
CTDNEP1-202ENST00000570380 CHMP2BQ9UQN3 213 aa9.24□□□□□ -0.93
CTDNEP1-202ENST00000570380 PCDHA9Q9Y5H5 950 aa9.24□□□□□ -0.93
CTDNEP1-202ENST00000570380 GOLGA8QA0A0J9YX86 632 aa9.23□□□□□ -0.93
CTDNEP1-202ENST00000570380 GOLGA8OA6NCC3 632 aa9.23□□□□□ -0.93
CTDNEP1-202ENST00000570380 ZNF814B7Z6K7 855 aa9.23□□□□□ -0.93
CTDNEP1-202ENST00000570380 GOLGA8NF8WBI6 632 aa9.23□□□□□ -0.93
CTDNEP1-202ENST00000570380 GOLGA8RI6L899 631 aa9.23□□□□□ -0.93
CTDNEP1-202ENST00000570380 ADAMDEC1O15204 470 aa9.23□□□□□ -0.93
CTDNEP1-202ENST00000570380 SEMA3DO95025 777 aa9.23□□□□□ -0.93
CTDNEP1-202ENST00000570380 SYNGR4O95473 234 aa9.23□□□□□ -0.93
CTDNEP1-202ENST00000570380 NR4A2P43354 598 aa9.23□□□□□ -0.93
CTDNEP1-202ENST00000570380 ATP6V0D1P61421 351 aa9.23□□□□□ -0.93
CTDNEP1-202ENST00000570380 ITGADQ13349 1161 aa9.23□□□□□ -0.93
CTDNEP1-202ENST00000570380 PPA1Q15181 289 aa9.23□□□□□ -0.93
CTDNEP1-202ENST00000570380 STK11Q15831 433 aa9.23□□□□□ -0.93
CTDNEP1-202ENST00000570380 CPSF6Q16630 551 aaKnown RBP eCLIP9.23□□□□□ -0.93
CTDNEP1-202ENST00000570380 PRR31Q5SQ13 230 aa9.23□□□□□ -0.93
CTDNEP1-202ENST00000570380 LIPJQ5W064 366 aa9.23□□□□□ -0.93
CTDNEP1-202ENST00000570380 B3GLCTQ6Y288 498 aa9.23□□□□□ -0.93
CTDNEP1-202ENST00000570380 Q6ZSR9 355 aa9.23□□□□□ -0.93
CTDNEP1-202ENST00000570380 BHLHA15Q7RTS1 189 aaPredicted RBP9.23□□□□□ -0.93
CTDNEP1-202ENST00000570380 FBXL14Q8N1E6 418 aa9.23□□□□□ -0.93
CTDNEP1-202ENST00000570380 TEX9Q8N6V9 391 aa9.23□□□□□ -0.93
CTDNEP1-202ENST00000570380 WDR20Q8TBZ3 569 aa9.23□□□□□ -0.93
CTDNEP1-202ENST00000570380 UBTD2Q8WUN7 234 aa9.23□□□□□ -0.93
CTDNEP1-202ENST00000570380 KAT2AQ92830 837 aa9.23□□□□□ -0.93
CTDNEP1-202ENST00000570380 CNRIP1Q96F85 164 aaPredicted RBP9.23□□□□□ -0.93
CTDNEP1-202ENST00000570380 VSTM2LQ96N03 204 aa9.23□□□□□ -0.93
CTDNEP1-202ENST00000570380 ZNF681Q96N22 645 aa9.23□□□□□ -0.93
CTDNEP1-202ENST00000570380 NPAS1Q99742 590 aa9.23□□□□□ -0.93
CTDNEP1-202ENST00000570380 USB1Q9BQ65 265 aaKnown RBP9.23□□□□□ -0.93
CTDNEP1-202ENST00000570380 TSPY26PQ9H489 355 aa9.23□□□□□ -0.93
CTDNEP1-202ENST00000570380 RHOJQ9H4E5 214 aa9.23□□□□□ -0.93
CTDNEP1-202ENST00000570380 STOML1Q9UBI4 398 aa9.23□□□□□ -0.93
CTDNEP1-202ENST00000570380 MTO1Q9Y2Z2 717 aaKnown RBP9.23□□□□□ -0.93
CTDNEP1-202ENST00000570380 A0A0J9YW62 118 aa9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 C1orf226A1L170 272 aa9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 TMEM89A2RUT3 159 aa9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 UBXN8O00124 270 aa9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 FOXE1O00358 373 aaPredicted RBP9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 TNFSF11O14788 317 aa9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 GMFGO60234 142 aa9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 SRP14P37108 136 aaKnown RBP9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 PIK3CGP48736 1102 aa9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 PDLIM4P50479 330 aa9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 FABP6P51161 128 aa9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 SLC12A2P55011 1212 aa9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 ACTG1P63261 375 aa9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 MRPS22P82650 360 aaKnown RBP9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 POU4F1Q01851 419 aa9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 SPOCK1Q08629 439 aa9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 MGAT5Q09328 741 aa9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 FRG1Q14331 258 aaKnown RBP9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 ZNF628Q5EBL2 1059 aa9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 TMEM201Q5SNT2 666 aa9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 CCNYL2Q5T2Q4 361 aa9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 GTF2IRD2BQ6EKJ0 949 aa9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 MARCH3Q86UD3 253 aa9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 GTF2IRD2Q86UP8 949 aa9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 WDR75Q8IWA0 830 aaKnown RBP9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 SLC44A2Q8IWA5 706 aaPredicted RBP9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 TUSC5Q8IXB3 177 aa9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 CEP112Q8N8E3 955 aa9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 OR2V1Q8NHB1 315 aa9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 ZNF675Q8TD23 568 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms