RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 MARVELD3Q96A59 401 aa11.85□□□□□ -0.51
CNOT1-220ENST00000569916 ARL8AQ96BM9 186 aa11.85□□□□□ -0.51
CNOT1-220ENST00000569916 OTUB1Q96FW1 271 aaPredicted RBP11.85□□□□□ -0.51
CNOT1-220ENST00000569916 C16orf58Q96GQ5 468 aa11.85□□□□□ -0.51
CNOT1-220ENST00000569916 DUSP26Q9BV47 211 aa11.85□□□□□ -0.51
CNOT1-220ENST00000569916 NEUROD4Q9HD90 331 aa11.85□□□□□ -0.51
CNOT1-220ENST00000569916 THAP1Q9NVV9 213 aa11.85□□□□□ -0.51
CNOT1-220ENST00000569916 PPP4R1LQ9P1A2 415 aa11.85□□□□□ -0.51
CNOT1-220ENST00000569916 NUP214P35658 2090 aaPredicted RBP11.85□□□□□ -0.51
CNOT1-220ENST00000569916 MED12Q93074 2177 aa11.84□□□□□ -0.51
CNOT1-220ENST00000569916 A0A0G2JNJ9 132 aa11.84□□□□□ -0.51
CNOT1-220ENST00000569916 FAM90A27PA6NNH2 459 aa11.84□□□□□ -0.51
CNOT1-220ENST00000569916 AHRRA9YTQ3 701 aa11.84□□□□□ -0.51
CNOT1-220ENST00000569916 KDM4EB2RXH2 506 aaPredicted RBP11.84□□□□□ -0.51
CNOT1-220ENST00000569916 SDHDO14521 159 aa11.84□□□□□ -0.51
CNOT1-220ENST00000569916 ANKRD28O15084 1053 aa11.84□□□□□ -0.51
CNOT1-220ENST00000569916 KCNK2O95069 426 aa11.84□□□□□ -0.51
CNOT1-220ENST00000569916 ACTL6AO96019 429 aa11.84□□□□□ -0.51
CNOT1-220ENST00000569916 HMGN2P05204 90 aaKnown RBP11.84□□□□□ -0.51
CNOT1-220ENST00000569916 ALOX5P09917 674 aa11.84□□□□□ -0.51
CNOT1-220ENST00000569916 LBPP18428 481 aa11.84□□□□□ -0.51
CNOT1-220ENST00000569916 KIR3DL1P43629 444 aa11.84□□□□□ -0.51
CNOT1-220ENST00000569916 PRIM2P49643 509 aa11.84□□□□□ -0.51
CNOT1-220ENST00000569916 GFRA1P56159 465 aa11.84□□□□□ -0.51
CNOT1-220ENST00000569916 WNT3P56703 355 aa11.84□□□□□ -0.51
CNOT1-220ENST00000569916 HBA1P69905 142 aa11.84□□□□□ -0.51
CNOT1-220ENST00000569916 OCRLQ01968 901 aa11.84□□□□□ -0.51
CNOT1-220ENST00000569916 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.84□□□□□ -0.51
CNOT1-220ENST00000569916 GRAMD1BQ3KR37 738 aa11.84□□□□□ -0.51
CNOT1-220ENST00000569916 LSM12Q3MHD2 195 aaKnown RBP11.84□□□□□ -0.51
CNOT1-220ENST00000569916 RIPPLY2Q5TAB7 128 aa11.84□□□□□ -0.51
CNOT1-220ENST00000569916 ATG16L1Q676U5 607 aa11.84□□□□□ -0.51
CNOT1-220ENST00000569916 OR4F3Q6IEY1 312 aa11.84□□□□□ -0.51
CNOT1-220ENST00000569916 OGFOD2Q6N063 350 aa11.84□□□□□ -0.51
CNOT1-220ENST00000569916 ZAR1Q86SH2 424 aa11.84□□□□□ -0.51
CNOT1-220ENST00000569916 GALNT10Q86SR1 603 aa11.84□□□□□ -0.51
CNOT1-220ENST00000569916 IFNEQ86WN2 208 aa11.84□□□□□ -0.51
CNOT1-220ENST00000569916 PM20D2Q8IYS1 436 aa11.84□□□□□ -0.51
CNOT1-220ENST00000569916 OR10Q1Q8NGQ4 319 aa11.84□□□□□ -0.51
CNOT1-220ENST00000569916 OR14L1PQ8NHC6 308 aa11.84□□□□□ -0.51
CNOT1-220ENST00000569916 LILRB4Q8NHJ6 448 aa11.84□□□□□ -0.51
CNOT1-220ENST00000569916 SFXN5Q8TD22 340 aa11.84□□□□□ -0.51
CNOT1-220ENST00000569916 JADE3Q92613 823 aa11.84□□□□□ -0.51
CNOT1-220ENST00000569916 ABTB1Q969K4 478 aaPredicted RBP11.84□□□□□ -0.51
CNOT1-220ENST00000569916 WDYHV1Q96HA8 205 aa11.84□□□□□ -0.51
CNOT1-220ENST00000569916 YIPF4Q9BSR8 244 aa11.84□□□□□ -0.51
CNOT1-220ENST00000569916 TAS2R10Q9NYW0 307 aa11.84□□□□□ -0.51
CNOT1-220ENST00000569916 MARCOQ9UEW3 520 aaPredicted RBP11.84□□□□□ -0.51
CNOT1-220ENST00000569916 Q9UFV3 132 aa11.84□□□□□ -0.51
CNOT1-220ENST00000569916 DKKL1Q9UK85 242 aa11.84□□□□□ -0.51
CNOT1-220ENST00000569916 CAMK2AQ9UQM7 478 aa11.84□□□□□ -0.51
CNOT1-220ENST00000569916 MRPS18CQ9Y3D5 142 aaKnown RBP11.84□□□□□ -0.51
CNOT1-220ENST00000569916 SNX8Q9Y5X2 465 aa11.84□□□□□ -0.51
CNOT1-220ENST00000569916 NAV2Q8IVL1 2488 aa11.84□□□□□ -0.51
CNOT1-220ENST00000569916 CENPEQ02224 2701 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 NKX2-6A6NCS4 301 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 HDAC3O15379 428 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 TOXO94900 526 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 EPPINO95925 133 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 ALDOCP09972 364 aaKnown RBP11.83□□□□□ -0.52
CNOT1-220ENST00000569916 PRF1P14222 555 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 DPP4P27487 766 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 GCKP35557 465 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 CCT3P49368 545 aaKnown RBP11.83□□□□□ -0.52
CNOT1-220ENST00000569916 TFF3Q07654 80 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 STX5Q13190 355 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 TP53BP2Q13625 1128 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 PGS1Q32NB8 556 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 CCNJQ5T5M9 372 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 CDC73Q6P1J9 531 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 FIGNL1Q6PIW4 674 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 APOOLQ6UXV4 268 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 MARCH3Q86UD3 253 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 TRIM42Q8IWZ5 723 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 CLECL1Q8IZS7 167 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 COX18Q8N8Q8 333 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 ACBD4Q8NC06 268 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 OR2M3Q8NG83 312 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 OR4K17Q8NGC6 315 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 OR8J2Q8NGG1 315 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 OR56A1Q8NGH5 318 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 OR5AK3PQ8NH89 298 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 TESCQ96BS2 214 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 DTNBP1Q96EV8 351 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 STACQ99469 402 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 UCK2Q9BZX2 261 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 DPY30Q9C005 99 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 DSN1Q9H410 356 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 MANSC1Q9H8J5 431 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 SDHAF3Q9NRP4 125 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 DUSP22Q9NRW4 184 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 GPATCH2Q9NW75 528 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 FBXO34Q9NWN3 711 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 GIN1Q9NXP7 522 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 DOCK7Q96N67 2140 aa11.83□□□□□ -0.52
CNOT1-220ENST00000569916 CACNA1DQ01668 2161 aa11.82□□□□□ -0.52
CNOT1-220ENST00000569916 IGLV3-32A0A0A0MS00 114 aa11.82□□□□□ -0.52
CNOT1-220ENST00000569916 RNASET2O00584 256 aaKnown RBP11.82□□□□□ -0.52
CNOT1-220ENST00000569916 KLF11O14901 512 aa11.82□□□□□ -0.52
CNOT1-220ENST00000569916 CFLARO15519 480 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms