RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 WNT16Q9UBV4 365 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 TESQ9UGI8 421 aaKnown RBP5.02□□□□□ -1.61
SF3B3-213ENST00000569687 WARS2Q9UGM6 360 aaKnown RBP5.02□□□□□ -1.61
SF3B3-213ENST00000569687 SLC13A4Q9UKG4 626 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 FBXL21Q9UKT6 434 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 MKLN1Q9UL63 735 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 CA14Q9ULX7 337 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 NDRG2Q9UN36 371 aaKnown RBP5.02□□□□□ -1.61
SF3B3-213ENST00000569687 B3GNT3Q9Y2A9 372 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 MRPS2Q9Y399 296 aaKnown RBP5.02□□□□□ -1.61
SF3B3-213ENST00000569687 RPL36Q9Y3U8 105 aaKnown RBP5.02□□□□□ -1.61
SF3B3-213ENST00000569687 HEMK1Q9Y5R4 338 aaPredicted RBP5.02□□□□□ -1.61
SF3B3-213ENST00000569687 COL6A3P12111 3177 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 IRGMA1A4Y4 181 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 HYKKA2RU49 373 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 FAM221AA4D161 298 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 FITM1A5D6W6 292 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 LILRA5A6NI73 299 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 LMO7DNF2Z398 122 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 FAM227AF5H4B4 570 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 TMX2-CTNND1H3BSU7 103 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 M0R3G1 203 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 CHST10O43529 356 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 FGF17O60258 216 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 ENTPD6O75354 484 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 NME6O75414 186 aaPredicted RBP5.01□□□□□ -1.61
SF3B3-213ENST00000569687 UBXN7O94888 489 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 LYPD3O95274 346 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 WNT1P04628 370 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 HMGN1P05114 100 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 EIF2S1P05198 315 aaKnown RBP5.01□□□□□ -1.61
SF3B3-213ENST00000569687 LCKP06239 509 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 CELA2BP08218 269 aaPredicted RBP5.01□□□□□ -1.61
SF3B3-213ENST00000569687 STSP08842 583 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 ALPPL2P10696 532 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 ACP2P11117 423 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 PVRP15151 417 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 ST6GAL1P15907 406 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 CD36P16671 472 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 ZNF12P17014 697 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 FPR3P25089 353 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 CSTF2P33240 577 aaKnown RBP eCLIP5.01□□□□□ -1.61
SF3B3-213ENST00000569687 LIPAP38571 399 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 OMPP47874 163 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 GABRA4P48169 554 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 PCYT1AP49585 367 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 ENTPD1P49961 510 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 ZNF136P52737 540 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 SMSP52788 366 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 PDX1P52945 283 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 VSX2P58304 361 aaPredicted RBP5.01□□□□□ -1.61
SF3B3-213ENST00000569687 TAS2R41P59536 307 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 HHEXQ03014 270 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 GINS1Q14691 196 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 TCEA2Q15560 299 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 LTB4RQ15722 352 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 DUSP5Q16690 384 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 DGUOKQ16854 277 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 TIGD6Q17RP2 521 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 KLHL22Q53GT1 634 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 TRMT12Q53H54 448 aaKnown RBP5.01□□□□□ -1.61
SF3B3-213ENST00000569687 EIPR1Q53HC9 387 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 ZNF542PQ5EBM4 170 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 MFSD4BQ5TF39 518 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 SAMD5Q5TGI4 173 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 TMEM236Q5W0B7 351 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 ACSM5Q6NUN0 579 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 FAM111BQ6SJ93 734 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 CASP12Q6UXS9 341 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 GDPGP1Q6ZNW5 385 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 Q6ZNX1 250 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 MBOAT2Q6ZWT7 520 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 ZNF367Q7RTV3 350 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 DGLUCYQ7Z3D6 616 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 SZRD1Q7Z422 152 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 VRK2Q86Y07 508 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 GRAMD2AQ8IUY3 354 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 SFTPA2Q8IWL1 248 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 OR4N5Q8IXE1 308 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 ZNF595Q8IYB9 648 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 NLGN4XQ8N0W4 816 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 CARFQ8N187 725 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 ZNF619Q8N2I2 560 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 TMEM52Q8NDY8 209 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 FLCNQ8NFG4 579 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 PROKR2Q8NFJ6 384 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 OR6Q1Q8NGQ2 317 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 ZCCHC10Q8TBK6 192 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 DYNC2LI1Q8TCX1 351 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 ADAMTS18Q8TE60 1221 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 OIT3Q8WWZ8 545 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 S100ZQ8WXG8 99 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 GATAD2BQ8WXI9 593 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 DNASE2BQ8WZ79 361 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 OSTF1Q92882 214 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 CDS1Q92903 461 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 CLDN23Q96B33 292 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 TMEM80Q96HE8 168 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 SH3YL1Q96HL8 342 aaPredicted RBP5.01□□□□□ -1.61
SF3B3-213ENST00000569687 ZNF578Q96N58 590 aaPredicted RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms