RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 ZNF510Q9Y2H8 683 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 SPIN1Q9Y657 262 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 GON4LQ3T8J9 2241 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 STK36Q9NRP7 1315 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 A0A087WZY1 265 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 TRAV19A0A0A6YYK7 116 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 A0A0U1RRA0 63 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 TTC26A0AVF1 554 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 CTAGE15A4D2H0 777 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 TRIM49BA6NDI0 452 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 TMEM110-MUSTN1A8MSY1 372 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 MEI4A8MW99 385 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 ANKRD63C9JTQ0 380 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 H0YC42 278 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 PIRO00625 290 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 E2F3O00716 465 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 CLDN3O15551 220 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 GPRIN2O60269 458 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 NEMFO60524 1076 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 CYTIPO60759 359 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 NADKO95544 446 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 FGF19O95750 216 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 WDPCPO95876 746 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 MOCS2O96007 188 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 NGFP01138 241 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 H1F0P07305 194 aaKnown RBP2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 FRMD6-AS1P0C7T7 363 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 ZCCHC18P0CG32 403 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 THRBP10828 461 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 EPB41P11171 864 aaKnown RBP2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 HLA-EP13747 358 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 GCFC2P16383 781 aaKnown RBP2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 LMO2P25791 158 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 ELAVL4P26378 380 aaKnown RBP2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 PKLRP30613 574 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 CASQ1P31415 396 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 TAGLN2P37802 199 aaKnown RBP2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 MATKP42679 507 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 ATP5OP48047 213 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 SH3BGRP55822 239 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 UBE2HP62256 183 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 IL24Q13007 206 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 SNX1Q13596 522 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 GK2Q14410 553 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 NUMA1Q14980 2115 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 NPTX1Q15818 432 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 KIAA1644Q3SXP7 199 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 EOGTQ5NDL2 527 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 PM20D1Q6GTS8 502 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 FBXL22Q6P050 247 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 CES3Q6UWW8 571 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 ARSKQ6UWY0 536 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 ZYG11AQ6WRX3 759 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 TPGS1Q6ZTW0 290 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 RUFY3Q7L099 469 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 CTAGE6Q86UF2 777 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 VASH2Q86V25 355 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 TMEM25Q86YD3 366 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 GPALPP1Q8IXQ4 340 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 THEM5Q8N1Q8 247 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 THAP8Q8NA92 274 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 OR52B4Q8NGK2 314 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 OR4A16Q8NH70 328 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 MTERF3Q96E29 417 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 CFAP36Q96G28 342 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 BTBD10Q9BSF8 475 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 ZSCAN5AQ9BUG6 496 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 UBQLN3Q9H347 655 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 GORASP2Q9H8Y8 452 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 TM9SF3Q9HD45 589 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 CNOT2Q9NZN8 540 aaKnown RBP2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 COX16Q9P0S2 106 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 GCNT4Q9P109 453 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 LRWD1Q9UFC0 647 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 UBQLN1Q9UMX0 589 aaKnown RBP2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 SH3GLB1Q9Y371 365 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 TMED3Q9Y3Q3 217 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 KLK4Q9Y5K2 254 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 CPQQ9Y646 472 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 NID2Q14112 1375 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 URB1O60287 2271 aaKnown RBP2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 MYO18BQ8IUG5 2567 aa2.94□□□□□ -1.94
HMGB1P6-201ENST00000569046 PHLPP2Q6ZVD8 1323 aa2.93□□□□□ -1.94
HMGB1P6-201ENST00000569046 ATMQ13315 3056 aa2.93□□□□□ -1.94
HMGB1P6-201ENST00000569046 KALRNO60229 2985 aa2.93□□□□□ -1.94
HMGB1P6-201ENST00000569046 COL27A1Q8IZC6 1860 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P6-201ENST00000569046 TMEM129A0AVI4 362 aa2.93□□□□□ -1.94
HMGB1P6-201ENST00000569046 MAGEB16A2A368 324 aa2.93□□□□□ -1.94
HMGB1P6-201ENST00000569046 C2orf81A6NN90 581 aa2.93□□□□□ -1.94
HMGB1P6-201ENST00000569046 F8VVB4 439 aa2.93□□□□□ -1.94
HMGB1P6-201ENST00000569046 F8VWA3 439 aa2.93□□□□□ -1.94
HMGB1P6-201ENST00000569046 SLC28A1O00337 649 aa2.93□□□□□ -1.94
HMGB1P6-201ENST00000569046 NR5A2O00482 541 aa2.93□□□□□ -1.94
HMGB1P6-201ENST00000569046 CLDN5O00501 218 aa2.93□□□□□ -1.94
HMGB1P6-201ENST00000569046 PES1O00541 588 aaKnown RBP2.93□□□□□ -1.94
HMGB1P6-201ENST00000569046 RRP8O43159 456 aaKnown RBP2.93□□□□□ -1.94
HMGB1P6-201ENST00000569046 JAK2O60674 1132 aa2.93□□□□□ -1.94
HMGB1P6-201ENST00000569046 NOL4O94818 638 aa2.93□□□□□ -1.94
HMGB1P6-201ENST00000569046 KRT8P05787 483 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms