RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 SYT5O00445 386 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 KHNYNO15037 678 aaKnown RBP6.56□□□□□ -1.36
SMG1-215ENST00000568239 TOX3O15405 576 aaPredicted RBP6.56□□□□□ -1.36
SMG1-215ENST00000568239 XPNPEP2O43895 674 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 GDF9O60383 454 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 NKX2-2O95096 273 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 ANGPTL1O95841 491 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 DBIP07108 87 aaKnown RBP6.56□□□□□ -1.36
SMG1-215ENST00000568239 TRHRP34981 398 aaPredicted RBP6.56□□□□□ -1.36
SMG1-215ENST00000568239 LIMS1P48059 325 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 NR1H2P55055 460 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 PIGFQ07326 219 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 APOFQ13790 326 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 KEAP1Q14145 624 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 NPTX1Q15818 432 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 ENTPD8Q5MY95 495 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 PEAR1Q5VY43 1037 aaPredicted RBP6.56□□□□□ -1.36
SMG1-215ENST00000568239 FOXB2Q5VYV0 432 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 TMEM236Q5W0B7 351 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 PWWP2BQ6NUJ5 590 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 ARHGAP22Q7Z5H3 698 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 ZNF321PQ8N8H1 164 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 SLC38A9Q8NBW4 561 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 ZBTB44Q8NCP5 570 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 OR4K5Q8NGD3 323 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 RHBDD1Q8TEB9 315 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 PHOX2BQ99453 314 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 ITPAQ9BY32 194 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 APMAPQ9HDC9 416 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 SEMA5BQ9P283 1151 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 SRPK3Q9UPE1 567 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 SATB2Q9UPW6 733 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 EP300Q09472 2414 aaPredicted RBP6.55□□□□□ -1.36
SMG1-215ENST00000568239 M0R129 80 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 FAAHO00519 579 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 BRINP1O60477 761 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 NTN1O95631 604 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 AK1P00568 194 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 CKMT1AP12532 417 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 CSTF2P33240 577 aaKnown RBP eCLIP6.55□□□□□ -1.36
SMG1-215ENST00000568239 DUSP3P51452 185 aaPredicted RBP6.55□□□□□ -1.36
SMG1-215ENST00000568239 UGT2B15P54855 530 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 IGLV3-21P80748 117 aaPredicted RBP6.55□□□□□ -1.36
SMG1-215ENST00000568239 ALDH6A1Q02252 535 aaKnown RBP6.55□□□□□ -1.36
SMG1-215ENST00000568239 OCA2Q04671 838 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 CDK5R2Q13319 367 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 IL18R1Q13478 541 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 NEDD8Q15843 81 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 PDZK1Q5T2W1 519 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 KLHL17Q6TDP4 642 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 ZNF730Q6ZMV8 503 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 B3GNT8Q7Z7M8 397 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 PPP1R3BQ86XI6 285 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 PTPMT1Q8WUK0 201 aaPredicted RBP6.55□□□□□ -1.36
SMG1-215ENST00000568239 SGCDQ92629 289 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 SLC38A4Q969I6 547 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 VSTM2LQ96N03 204 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 PELOQ9BRX2 385 aaKnown RBP6.55□□□□□ -1.36
SMG1-215ENST00000568239 YIPF3Q9GZM5 350 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 POLR2J3Q9H1A7 115 aaKnown RBP6.55□□□□□ -1.36
SMG1-215ENST00000568239 SEMA4GQ9NTN9 838 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 OCIAD1Q9NX40 245 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 IMPAD1Q9NX62 359 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 KCNE5Q9UJ90 142 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 BLOC1S6Q9UL45 172 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 NDRG4Q9ULP0 352 aaKnown RBP6.55□□□□□ -1.36
SMG1-215ENST00000568239 MMACHCQ9Y4U1 282 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 A0A1W2PRQ8 180 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 SH3PXD2BA1X283 911 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 CDC14CA4D256 554 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 KIAA0513O60268 411 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 PRG2P13727 222 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 NID1P14543 1247 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 CBLP22681 906 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 CRHBPP24387 322 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 RYKP34925 604 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 FUT7Q11130 342 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 ST3GAL3Q11203 375 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 DGCR6Q14129 220 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 PTGES3Q15185 160 aaKnown RBP6.55□□□□□ -1.36
SMG1-215ENST00000568239 SMN1Q16637 294 aaKnown RBP6.55□□□□□ -1.36
SMG1-215ENST00000568239 EIPR1Q53HC9 387 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 DHRS4L2Q6PKH6 230 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 NPSR1Q6W5P4 371 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 RBM44Q6ZP01 1051 aaKnown RBP6.55□□□□□ -1.36
SMG1-215ENST00000568239 QSOX2Q6ZRP7 698 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 P3H2Q8IVL5 708 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 STT3BQ8TCJ2 826 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 TMIGD2Q96BF3 282 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 EFHD2Q96C19 240 aaPredicted RBP6.55□□□□□ -1.36
SMG1-215ENST00000568239 LMF1Q96S06 567 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 ARHGDIGQ99819 225 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 UCK2Q9BZX2 261 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 ARMC7Q9H6L4 198 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 AMBNQ9NP70 447 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 C11orf16Q9NQ32 467 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 PRODH2Q9UF12 536 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 ACAD8Q9UKU7 415 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 CBLCQ9ULV8 474 aa6.55□□□□□ -1.36
SMG1-215ENST00000568239 IGHV3-20A0A0C4DH32 117 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms