RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 NKX2-6A6NCS4 301 aa22.91■■□□□ 1.26
FANCA-228ENST00000567943 C17orf51A8MQB3 221 aa22.91■■□□□ 1.26
FANCA-228ENST00000567943 SDHDO14521 159 aa22.91■■□□□ 1.26
FANCA-228ENST00000567943 HDAC3O15379 428 aa22.91■■□□□ 1.26
FANCA-228ENST00000567943 TOXO94900 526 aa22.91■■□□□ 1.26
FANCA-228ENST00000567943 NKX2-2O95096 273 aa22.91■■□□□ 1.26
FANCA-228ENST00000567943 ACP2P11117 423 aa22.91■■□□□ 1.26
FANCA-228ENST00000567943 COX6B1P14854 86 aa22.91■■□□□ 1.26
FANCA-228ENST00000567943 MAP3K8P41279 467 aa22.91■■□□□ 1.26
FANCA-228ENST00000567943 GAS1P54826 345 aa22.91■■□□□ 1.26
FANCA-228ENST00000567943 LSM12Q3MHD2 195 aaKnown RBP22.91■■□□□ 1.26
FANCA-228ENST00000567943 VPS26BQ4G0F5 336 aa22.91■■□□□ 1.26
FANCA-228ENST00000567943 WIPI1Q5MNZ9 446 aaPredicted RBP22.91■■□□□ 1.26
FANCA-228ENST00000567943 DCST1Q5T197 706 aa22.91■■□□□ 1.26
FANCA-228ENST00000567943 VASNQ6EMK4 673 aa22.91■■□□□ 1.26
FANCA-228ENST00000567943 MFSD12Q6NUT3 480 aa22.91■■□□□ 1.26
FANCA-228ENST00000567943 WDR75Q8IWA0 830 aaKnown RBP22.91■■□□□ 1.26
FANCA-228ENST00000567943 LRRC34Q8IZ02 419 aa22.91■■□□□ 1.26
FANCA-228ENST00000567943 FAM83FQ8NEG4 500 aaPredicted RBP22.91■■□□□ 1.26
FANCA-228ENST00000567943 HOXB13Q92826 284 aaPredicted RBP22.91■■□□□ 1.26
FANCA-228ENST00000567943 RMND5BQ96G75 393 aaPredicted RBP22.91■■□□□ 1.26
FANCA-228ENST00000567943 C16orf58Q96GQ5 468 aa22.91■■□□□ 1.26
FANCA-228ENST00000567943 DPY30Q9C005 99 aa22.91■■□□□ 1.26
FANCA-228ENST00000567943 NPDC1Q9NQX5 325 aaPredicted RBP22.91■■□□□ 1.26
FANCA-228ENST00000567943 WIF1Q9Y5W5 379 aa22.91■■□□□ 1.26
FANCA-228ENST00000567943 NUP214P35658 2090 aaPredicted RBP22.91■■□□□ 1.26
FANCA-228ENST00000567943 MYO9AB2RTY4 2548 aa22.9■■□□□ 1.26
FANCA-228ENST00000567943 CFLARO15519 480 aa22.9■■□□□ 1.26
FANCA-228ENST00000567943 KCNH1O95259 989 aa22.9■■□□□ 1.26
FANCA-228ENST00000567943 IL33O95760 270 aa22.9■■□□□ 1.26
FANCA-228ENST00000567943 PSMD4P55036 377 aaKnown RBP22.9■■□□□ 1.26
FANCA-228ENST00000567943 NHSL2Q5HYW2 709 aa22.9■■□□□ 1.26
FANCA-228ENST00000567943 CAMKMTQ7Z624 323 aa22.9■■□□□ 1.26
FANCA-228ENST00000567943 YRDCQ86U90 279 aaKnown RBP22.9■■□□□ 1.26
FANCA-228ENST00000567943 LIX1LQ8IVB5 337 aa22.9■■□□□ 1.26
FANCA-228ENST00000567943 GOLGA6L1Q8N7Z2 621 aa22.9■■□□□ 1.26
FANCA-228ENST00000567943 SLC16A11Q8NCK7 471 aa22.9■■□□□ 1.26
FANCA-228ENST00000567943 ZNF75CPQ92670 426 aaPredicted RBP22.9■■□□□ 1.26
FANCA-228ENST00000567943 TREX2Q9BQ50 279 aaPredicted RBP22.9■■□□□ 1.26
FANCA-228ENST00000567943 YIPF4Q9BSR8 244 aa22.9■■□□□ 1.26
FANCA-228ENST00000567943 UGT2B28Q9BY64 529 aa22.9■■□□□ 1.26
FANCA-228ENST00000567943 WDR55Q9H6Y2 383 aaPredicted RBP22.9■■□□□ 1.26
FANCA-228ENST00000567943 CXorf36Q9H7Y0 433 aa22.9■■□□□ 1.26
FANCA-228ENST00000567943 FLRT3Q9NZU0 649 aa22.9■■□□□ 1.26
FANCA-228ENST00000567943 GOLGA8QA0A0J9YX86 632 aa22.89■■□□□ 1.25
FANCA-228ENST00000567943 GOLGA8OA6NCC3 632 aa22.89■■□□□ 1.25
FANCA-228ENST00000567943 TRPC5OSA6NMA1 111 aa22.89■■□□□ 1.25
FANCA-228ENST00000567943 FAM90A27PA6NNH2 459 aa22.89■■□□□ 1.25
FANCA-228ENST00000567943 GOLGA8NF8WBI6 632 aa22.89■■□□□ 1.25
FANCA-228ENST00000567943 SCO2O43819 266 aa22.89■■□□□ 1.25
FANCA-228ENST00000567943 HOXD4P09016 255 aaPredicted RBP22.89■■□□□ 1.25
FANCA-228ENST00000567943 GABRA1P14867 456 aa22.89■■□□□ 1.25
FANCA-228ENST00000567943 BMP7P18075 431 aa22.89■■□□□ 1.25
FANCA-228ENST00000567943 EVI2BP34910 448 aa22.89■■□□□ 1.25
FANCA-228ENST00000567943 PTGER4P35408 488 aa22.89■■□□□ 1.25
FANCA-228ENST00000567943 CCT3P49368 545 aaKnown RBP22.89■■□□□ 1.25
FANCA-228ENST00000567943 PRIM2P49643 509 aa22.89■■□□□ 1.25
FANCA-228ENST00000567943 DUSP5Q16690 384 aa22.89■■□□□ 1.25
FANCA-228ENST00000567943 SPDYE7PQ495Y7 208 aa22.89■■□□□ 1.25
FANCA-228ENST00000567943 OR5M10Q6IEU7 315 aa22.89■■□□□ 1.25
FANCA-228ENST00000567943 OR4F3Q6IEY1 312 aa22.89■■□□□ 1.25
FANCA-228ENST00000567943 OGFOD2Q6N063 350 aa22.89■■□□□ 1.25
FANCA-228ENST00000567943 PLCZ1Q86YW0 608 aa22.89■■□□□ 1.25
FANCA-228ENST00000567943 PSMA8Q8TAA3 256 aa22.89■■□□□ 1.25
FANCA-228ENST00000567943 JADE3Q92613 823 aa22.89■■□□□ 1.25
FANCA-228ENST00000567943 OTUB1Q96FW1 271 aaPredicted RBP22.89■■□□□ 1.25
FANCA-228ENST00000567943 SH3GL2Q99962 352 aa22.89■■□□□ 1.25
FANCA-228ENST00000567943 SPOCK3Q9BQ16 436 aa22.89■■□□□ 1.25
FANCA-228ENST00000567943 PRDM14Q9GZV8 571 aa22.89■■□□□ 1.25
FANCA-228ENST00000567943 VIPAS39Q9H9C1 493 aa22.89■■□□□ 1.25
FANCA-228ENST00000567943 SLCO1B7G3V0H7 640 aa22.88■■□□□ 1.25
FANCA-228ENST00000567943 KLF11O14901 512 aa22.88■■□□□ 1.25
FANCA-228ENST00000567943 CBR3O75828 277 aa22.88■■□□□ 1.25
FANCA-228ENST00000567943 IGKV1D-16P01601 117 aa22.88■■□□□ 1.25
FANCA-228ENST00000567943 HMGN2P05204 90 aaKnown RBP22.88■■□□□ 1.25
FANCA-228ENST00000567943 ALOX5P09917 674 aa22.88■■□□□ 1.25
FANCA-228ENST00000567943 IGFBP2P18065 325 aa22.88■■□□□ 1.25
FANCA-228ENST00000567943 EPHA3P29320 983 aa22.88■■□□□ 1.25
FANCA-228ENST00000567943 WNT3P56703 355 aa22.88■■□□□ 1.25
FANCA-228ENST00000567943 LASP1Q14847 261 aaKnown RBP22.88■■□□□ 1.25
FANCA-228ENST00000567943 ZCCHC12Q6PEW1 402 aa22.88■■□□□ 1.25
FANCA-228ENST00000567943 OR10Q1Q8NGQ4 319 aa22.88■■□□□ 1.25
FANCA-228ENST00000567943 NEUROD4Q9HD90 331 aa22.88■■□□□ 1.25
FANCA-228ENST00000567943 FBXL2Q9UKC9 423 aa22.88■■□□□ 1.25
FANCA-228ENST00000567943 DOCK7Q96N67 2140 aa22.87■■□□□ 1.25
FANCA-228ENST00000567943 ANKRD28O15084 1053 aa22.87■■□□□ 1.25
FANCA-228ENST00000567943 FADS1O60427 444 aa22.87■■□□□ 1.25
FANCA-228ENST00000567943 UTS2O95399 124 aa22.87■■□□□ 1.25
FANCA-228ENST00000567943 ALDOCP09972 364 aaKnown RBP22.87■■□□□ 1.25
FANCA-228ENST00000567943 HBA1P69905 142 aa22.87■■□□□ 1.25
FANCA-228ENST00000567943 TP53BP2Q13625 1128 aa22.87■■□□□ 1.25
FANCA-228ENST00000567943 ACSF3Q4G176 576 aaPredicted RBP22.87■■□□□ 1.25
FANCA-228ENST00000567943 GALNT10Q86SR1 603 aa22.87■■□□□ 1.25
FANCA-228ENST00000567943 CLECL1Q8IZS7 167 aa22.87■■□□□ 1.25
FANCA-228ENST00000567943 OR56A1Q8NGH5 318 aa22.87■■□□□ 1.25
FANCA-228ENST00000567943 CHMP6Q96FZ7 201 aa22.87■■□□□ 1.25
FANCA-228ENST00000567943 WDYHV1Q96HA8 205 aa22.87■■□□□ 1.25
FANCA-228ENST00000567943 RTN4RQ9BZR6 473 aa22.87■■□□□ 1.25
FANCA-228ENST00000567943 OR2B2Q9GZK3 357 aa22.87■■□□□ 1.25
FANCA-228ENST00000567943 FAM120CQ9NX05 1096 aaKnown RBP22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms