RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 SLC17A7Q9P2U7 560 aa4.35□□□□□ -1.71
CLK3-219ENST00000567805 FOXD3Q9UJU5 478 aaPredicted RBP4.35□□□□□ -1.71
CLK3-219ENST00000567805 DKKL1Q9UK85 242 aa4.35□□□□□ -1.71
CLK3-219ENST00000567805 FBXL2Q9UKC9 423 aa4.35□□□□□ -1.71
CLK3-219ENST00000567805 CBLCQ9ULV8 474 aa4.35□□□□□ -1.71
CLK3-219ENST00000567805 FIS1Q9Y3D6 152 aa4.35□□□□□ -1.71
CLK3-219ENST00000567805 L3MBTL1Q9Y468 752 aa4.35□□□□□ -1.71
CLK3-219ENST00000567805 TRAF6Q9Y4K3 522 aa4.35□□□□□ -1.71
CLK3-219ENST00000567805 CREBBPQ92793 2442 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 KDM4EB2RXH2 506 aaPredicted RBP4.34□□□□□ -1.71
CLK3-219ENST00000567805 TMEM233B4DJY2 109 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 H0Y3Z8 333 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 LINC01387J3KSC0 135 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 PIP5K1BO14986 540 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 SCAMP2O15127 329 aaKnown RBP4.34□□□□□ -1.71
CLK3-219ENST00000567805 AKAP10O43572 662 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 SCO2O43819 266 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 TYROBPO43914 113 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 ZNF500O60304 480 aaPredicted RBP4.34□□□□□ -1.71
CLK3-219ENST00000567805 FADS1O60427 444 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 ZIC3O60481 467 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 LYPLA1O75608 230 aaPredicted RBP4.34□□□□□ -1.71
CLK3-219ENST00000567805 RCBTB2O95199 551 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 ZWINTO95229 277 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 KCNH1O95259 989 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 IL18BPO95998 194 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 BPGMP07738 259 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 PRPS2P11908 318 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 BCKDHAP12694 445 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 CTSSP25774 331 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 DPP4P27487 766 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 MAPK1P28482 360 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 OPRM1P35372 400 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 HPCAL1P37235 193 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 RPL3P39023 403 aaKnown RBP4.34□□□□□ -1.71
CLK3-219ENST00000567805 MAP3K8P41279 467 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 ETV4P43268 484 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 MMP16P51512 607 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 ZNF136P52737 540 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 DGKQP52824 942 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 DLX5P56178 289 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 WNT3P56703 355 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 CLDN18P56856 261 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 KRTAP10-9P60411 292 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 EEF1A1P68104 462 aaKnown RBP4.34□□□□□ -1.71
CLK3-219ENST00000567805 PRR5P85299 388 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 C17orf67Q0P5P2 114 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 MYBPHQ13203 477 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 GAB1Q13480 694 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 MLC1Q15049 377 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 BCL2A1Q16548 175 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 ATP6AP1LQ52LC2 224 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 ZNF385BQ569K4 471 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 OXLD1Q5BKU9 147 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 XKR7Q5GH72 579 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 EEF1A1P5Q5VTE0 462 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 OR5M10Q6IEU7 315 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 ANKRD26P1Q6NSI1 321 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 ZCCHC12Q6PEW1 402 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 POMZP3Q6PJE2 187 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 ARSKQ6UWY0 536 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 LRIG3Q6UXM1 1119 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 DNAJC14Q6Y2X3 702 aaPredicted RBP4.34□□□□□ -1.71
CLK3-219ENST00000567805 ZCCHC23Q6ZST2 131 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 ZNF551Q7Z340 670 aaPredicted RBP4.34□□□□□ -1.71
CLK3-219ENST00000567805 ADGRE4PQ86SQ3 457 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 CDH24Q86UP0 819 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 TMEM200AQ86VY9 491 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 NATD1Q8N6N6 113 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 FADS6Q8N9I5 356 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 CDRT4Q8N9R6 151 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 C9orf106Q8NAJ2 232 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 RELL2Q8NC24 303 aaPredicted RBP4.34□□□□□ -1.71
CLK3-219ENST00000567805 NUP43Q8NFH3 380 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 OR2M3Q8NG83 312 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 OR4K17Q8NGC6 315 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 OR6Y1Q8NGX8 325 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 GOT1L1Q8NHS2 421 aaPredicted RBP4.34□□□□□ -1.71
CLK3-219ENST00000567805 CLHC1Q8NHS4 586 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 RNASE6Q93091 150 aaKnown RBP4.34□□□□□ -1.71
CLK3-219ENST00000567805 CIDECQ96AQ7 238 aaPredicted RBP4.34□□□□□ -1.71
CLK3-219ENST00000567805 PPP3R2Q96LZ3 170 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 SFXN2Q96NB2 322 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 MS4A4EQ96PG1 132 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 TM9SF2Q99805 663 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 SH3GL2Q99962 352 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 TUBA1CQ9BQE3 449 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 TBL1XR1Q9BZK7 514 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 ACBD3Q9H3P7 528 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 PTGES2Q9H7Z7 377 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 HHATLQ9HCP6 504 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 SSU72Q9NP77 194 aaKnown RBP4.34□□□□□ -1.71
CLK3-219ENST00000567805 ATAD3AQ9NVI7 634 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 FAM120CQ9NX05 1096 aaKnown RBP4.34□□□□□ -1.71
CLK3-219ENST00000567805 SH3BP4Q9P0V3 963 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 CLCF1Q9UBD9 225 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 BAIAP2L1Q9UHR4 511 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 ATP6V1HQ9UI12 483 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 ZDHHC2Q9UIJ5 367 aa4.34□□□□□ -1.71
CLK3-219ENST00000567805 NUP214P35658 2090 aaPredicted RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms