RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 M6PRP20645 277 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 GABRA3P34903 492 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 ADRA1AP35348 466 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 AHRP35869 848 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 STK11Q15831 433 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 FAM189A2Q15884 450 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 PLK5Q496M5 336 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 C1QTNF12Q5T7M4 302 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 C18orf63Q68DL7 685 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 KDM4DQ6B0I6 523 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 ZNF546Q86UE3 836 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 LRRTM3Q86VH5 581 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 TMEM173Q86WV6 379 aaPredicted RBP11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 CAMKVQ8NCB2 501 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 NAXEQ8NCW5 288 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 BRIX1Q8TDN6 353 aaKnown RBP11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 SLC25A44Q96H78 314 aaPredicted RBP11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 LAMB4A4D0S4 1761 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 FZD7O75084 574 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 TSPAN15O95858 294 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 TGM6O95932 706 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 LIPCP11150 499 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 LAG3P18627 525 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 PBX2P40425 430 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 ZNF140P52738 457 aaPredicted RBP11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 DNM1P34Q6PK57 102 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 SCD5Q86SK9 330 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 ZNF527Q8NB42 609 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 GPR78Q96P69 363 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 ZIC5Q96T25 663 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 PSD2Q9BQI7 771 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 QRSL1Q9H0R6 528 aaKnown RBP11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 RNF208Q9H0X6 261 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 EPHA6Q9UF33 1036 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 TRBV4-1A0A0J9YWV2 114 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 TLX3O43711 291 aaPredicted RBP11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 LCMT2O60294 686 aaKnown RBP11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 PEX14O75381 377 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 ACP2P11117 423 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 UGT2B7P16662 529 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 NFYAP23511 347 aaPredicted RBP11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 CAMLGP49069 296 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 TAS2R38P59533 333 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 RPL19P84098 196 aaKnown RBP11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 HOXC5Q00444 222 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 SLC5A12Q1EHB4 618 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 PKDCCQ504Y2 493 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 BCDIN3DQ7Z5W3 292 aaKnown RBP11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 SPNS2Q8IVW8 549 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 SVBPQ8N300 66 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 GATSQ8NAP1 163 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 ZFAND1Q8TCF1 268 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 DUSP21Q9H596 190 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 FBXL2Q9UKC9 423 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 SCDO00767 359 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 MUSKO15146 869 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 TCRBP04435 133 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 TP53P04637 393 aaPredicted RBP11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 SORDQ00796 357 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 ZNF169Q14929 603 aaPredicted RBP11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 KCTD18Q6PI47 426 aaPredicted RBP11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 FIGNL1Q6PIW4 674 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 LRFN4Q6PJG9 635 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 NRROSQ86YC3 692 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 ARRDC2Q8TBH0 407 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 ELP4Q96EB1 424 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 GSX2Q9BZM3 304 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 INIPQ9NRY2 104 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 MYEF2Q9P2K5 600 aaKnown RBP11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 NDRG2Q9UN36 371 aaKnown RBP11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 FAM171A2A8MVW0 826 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 H7C417 338 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 AKR7A2O43488 359 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 CSO75390 466 aaKnown RBP11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 LEFTY1O75610 366 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 SNAPINO95295 136 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 PPP1R3DO95685 299 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 THEGLP0DJG4 465 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 GJA5P36382 358 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 HBA1P69905 142 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 RAB11BQ15907 218 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 ITPRIPL2Q3MIP1 535 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 ARL14Q8N4G2 192 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 UQCC2Q9BRT2 126 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 PARPBPQ9NWS1 579 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 HEBP2Q9Y5Z4 205 aa11.72□□□□□ -0.53
CSPG4P13-202ENST00000567704 HYKKA2RU49 373 aa11.71□□□□□ -0.53
CSPG4P13-202ENST00000567704 B4GALT2O60909 372 aa11.71□□□□□ -0.53
CSPG4P13-202ENST00000567704 ADRB3P13945 408 aa11.71□□□□□ -0.53
CSPG4P13-202ENST00000567704 GABRA5P31644 462 aa11.71□□□□□ -0.53
CSPG4P13-202ENST00000567704 PSMB10P40306 273 aa11.71□□□□□ -0.53
CSPG4P13-202ENST00000567704 ZNF33BQ06732 778 aa11.71□□□□□ -0.53
CSPG4P13-202ENST00000567704 PDGFRLQ15198 375 aa11.71□□□□□ -0.53
CSPG4P13-202ENST00000567704 RAB41Q5JT25 222 aa11.71□□□□□ -0.53
CSPG4P13-202ENST00000567704 TPGS2Q68CL5 300 aa11.71□□□□□ -0.53
CSPG4P13-202ENST00000567704 TMPRSS9Q7Z410 1059 aa11.71□□□□□ -0.53
CSPG4P13-202ENST00000567704 C12orf45Q8N5I9 185 aaPredicted RBP11.71□□□□□ -0.53
CSPG4P13-202ENST00000567704 SYNPRQ8TBG9 265 aa11.71□□□□□ -0.53
CSPG4P13-202ENST00000567704 TMEM163Q8TC26 289 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms